Os10g0414500

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Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0414500| Description = Similar to Tetrapyrrole methylase family protein| Version = NM_001071130.1 GI:115482003 GeneID:4348618| Length = 398...")
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Gene Name

Os10g0414500

Description

Similar to Tetrapyrrole methylase family protein

Version

NM_001071130.1 GI:115482003 GeneID:4348618

Length

3981 bp

Definition

Oryza sativa Japonica Group Os10g0414500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:14832228..14836208

Sequence Coding Region

14832756..14832836,14832988..14833161,14833554..14833596,14833788..14833932,14834012..14834120
,14834401..14834529,14834642..14834738,14835346..14835410,14835982..14836146

Expression

GEO Profiles:Os10g0414500

Genome Context

<gbrowseImage1> name=NC_008403:14832228..14836208 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:14832228..14836208 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgctgctccgcctccaggccctcgccctgaacctaacggcaccccgccgcctccccttcctccctctccgcgtcacgactgcgacggctccgctcgccggccgcctctccaccgccgccgcctctggcagctcgccggagtcacctgcctcggaaccggatttggattccgggctgtatcttgtggcaacgccaatcgggaacctcgaggatatcaccttaagggcattgcgtatcctcaaatgtgctgatgtcatactatcagaagacacaaggcattctggaaagctacttcaacattataacatcaagacacctcttctcagctttcataagtttaatgagcgtgaaagagagcctaatatcttaaagagacttcatgaaggggaagcagttgcattgattagtgatgctggtactcctggaattagtgatcctggcatggaactggctagactatgtgctactgagggaatccctgttatccccattcctgggccgtctgctgcaatagctgctctttctgcatctggtttgccaactgatgaatttacatttgtggggtttttaccaaagcatgctcgatcaagaaaagaaaggcttgaaatatctgcctgtcaagctgccacacaaattttctatgttcctccccatggaattcaccaatttctttctgatgctgcttcatcatttggtgattctaggtcatgtgttattgcaagggagataacgaaattacacgaagagttttggcggggaactattggtgaagcaaatgaagcctttgcaactcggcagccaaagggagaaattacagtgctcatagagggaaagttaatttcagctgatgaaactccatctgaggatttccttgagcatgaactcagagaattgatgacgcagggacatcctctgtcagcggcagtgaaaatggtgagtgaagctacatcagcaaagaagaaggatgtttatgccctcgcattaaggttatttggaaaatga</cdnaseq>

Protein Sequence

<aaseq>MASLLRLQALALNLTAPRRLPFLPLRVTTATAPLAGRLSTAAAS GSSPESPASEPDLDSGLYLVATPIGNLEDITLRALRILKCADVILSEDTRHSGKLLQH YNIKTPLLSFHKFNEREREPNILKRLHEGEAVALISDAGTPGISDPGMELARLCATEG IPVIPIPGPSAAIAALSASGLPTDEFTFVGFLPKHARSRKERLEISACQAATQIFYVP PHGIHQFLSDAASSFGDSRSCVIAREITKLHEEFWRGTIGEANEAFATRQPKGEITVL IEGKLISADETPSEDFLEHELRELMTQGHPLSAAVKMVSEATSAKKKDVYALALRLFG K</aaseq>

Gene Sequence

<dnaseqindica>3373..3453#3048..3221#2613..2655#2277..2421#2089..2197#1680..1808#1471..1567#799..863#63..227#gggagcaaacggcggcgacgcttcgcctccctctccggccgccgccgccgccgccgcagcccatggcgtcgctgctccgcctccaggccctcgccctgaacctaacggcaccccgccgcctccccttcctccctctccgcgtcacgactgcgacggctccgctcgccggccgcctctccaccgccgccgcctctggcagctcgccggagtcacctgcctcggaaccggtgacctctccgtctccattagtacatcagcttatgattttctttcacttctcttgcaaagttttctcacgggtggatggcctcagtatgtgtgggcgtggggggtttcactgtgtgagtgcatctcagaagagctagaaaaaaaattggtattttcagaacaacgcattggtttgggccgtagaactaaaatcataggtgatgtggaaggtgtaattttggtttatgagtattgagacatttagcaattgttaagataagtgtgtttttcatgcattactatgtgccaaattgcgagcggatgttcttctaatgtttgagcaagcataaattcgtacctgtggaccatgaggaactttctcagctctcaagtgaaataagagctgttgttcggaatgttgctttttatgcaggtgcttgtgtcttctactcttctgtatgaactggagaactggagtagaacgcaagaatgctttcgtactgtattttgtggggaatatgtacatattggtcaattagattgtccatgactatttcatgatgtctgttgttgatctattacaatcttcaggatttggattccgggctgtatcttgtggcaacgccaatcgggaacctcgaggatatcaccttaaggtatcagcttttaatctgttatggggtcaatctgcaaacatttttgtgtgggaaaacacttggtcatcaagctgacgcctacgaaatatcttctgaattttgatgtctatgtcataatatctagtgattcataagggtataccagggtaatagaactgacagtggtatgccgttttacttaaaaagaaaaggcgaaagtattgggacttgtctgattatacaattgttgtaaactcttaacaaaatttgtgaataggcaatcagctgattagcagcacttcttttagaataaaagaggaaatagagcaatgttctgctaaaatctctacagggagaaaaaaaaactttaattgtttgatagcacaattagcatcagttattattattttttatcaatcccctttactttttaccatgaggaaaatatcagggagggcatgctttctgttctgcacaaaaaaaaagaagaagaaaaaggaaaaacaaaacatagttgttttggctgaaccttgaggctacctccatgtagtaataggctgtaactggagcgtgtgctcctttcctgaaacatgctcctagctttaagcttggatggtccttgctgcagggcattgcgtatcctcaaatgtgctgatgtcatactatcagaagacacaaggcattctggaaagctacttcaacattataacatcaagacacctcttgtgagttaactgcattctaatgtttttgttcatgaatcacaagtagttgcacatttgcaccatgttgtgtgatgagtgccattgaacttagtctaaactgtaaaccttgcagctcagctttcataagtttaatgagcgtgaaagagagcctaatatcttaaagagacttcatgaaggggaagcagttgcattgattagtgatgctggtactcctggaattagtgatcctggcatggaactggtaaatcacttcactcctttgaccattcatacttgccaatctgtttgaatagtacatcctgctactctcttaaaccatgaataaacaaataggcaatgaatagtgtctaatagtgaaatgccctgcaaataacaatattattgaagcacattctacatgtgctatcagttagttgacactactcaagttagcagtaacagcatcagagactgttctttttaaagcccgatgctgcttctagatgtgtgagatgttaagcatgttgtactgttgcttacaggctagactatgtgctactgagggaatccctgttatccccattcctgggccgtctgctgcaatagctgctctttctgcatctggtttgccaactgatgaatttacatttggtaataaaatgattatgtacttactttatttatcaacaatgaacaatatttgttgttagttctgatatttcatttctagtggggtttttaccaaagcatgctcgatcaagaaaagaaaggcttgaaatatctgcctgtcaagctgccacacaaattttctatgttcctccccatggaattcaccaatttctttctgatgctgcttcatcatttggtgattctaggtaattgatattctgtcacccatgtatatcattgcttattgcatgatctggaatttctttttgtggaatttgtagtagtattatataaacaactgaaatactgcactctatgctgcatcccatttgtatgtggtgctaatgtgttatgcatgcgttgttgatctttcttttgtttatgtattgatattcaggtcatgtgttattgcaagggagataacgaaattacacgaagaggtaatcaacaaatttttactctgtttatatttcaatcttcaataaaatactagagctgtttcttcaaataaaataaatatacttcagctggtagttacagcagatggtatatcccacccactataagcaggtactcttaacttgtagtgctgtcatttccagctttacattgctgaacctactgcgaagtgctactggtcagattctacttggtattgactctgaattaagaaactaatatgcggtcttgttcatgccaatcagctatactgaattgtttgtgtattatctgtagaccaagctgtacccttatattctacatggtggactcataaatatttgtatttacttattttctctttgtagtcctgaatttgacatacatcttgtagttttggcggggaactattggtgaagcaaatgaagcctttgcaactcggcagccaaagggagaaattacagtgctcatagagggaaagttaatttcagctgatgaaactccatctgaggatttccttgagcatgaactcagagaattgatgacgcagggacatcctctgtcagcggtgtgcattcaacttagcttttgatgcctttcaagtcttcagcaatgtttcggttctatggttttttgtttttaagaaatacacacaaggtactggtcatacaatcatatcttattttctttaattctgaaataatgtttttctaatgtaggcagtgaaaatggtgagtgaagctacatcagcaaagaagaaggatgtttatgccctcgcattaaggttatttggaaaatgagtaaaatgcgatgttttgctctcatatggtaactaaactttcagaaaccatgaaggatgtttggaatgtgtcatatttttcagtccatttgaacatcgcggatatcttattgcctgtgtgcgtgcgcagtaaatagcctattgggcacgtccaaggccagggccactcactagcaaaggcagctttctgaagatgggaatagcaatggcagctttctgaagaactagctgattcaaacttttgaaagaggtgatatttggggaattttcagaaggtaccattcaaatttgctggaggatgatgctgttctggcgatggaaaaagtcttcgatctgtagcttcatcgttgtacaacagaagcttcgctgcatctgcatgacaagctatagctacctggttaggttaggcggtaagttagtatgatcaccttagattttatcgcaatagttatcgcagtgtatacattttgtcttagattcacatttatcgaaatcattattatggagctaatgggccgaatccgtcgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0414500, RefSeq:Os10g0414500