Os02g0495400

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Revision as of 02:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0495400| Description = Armadillo-like helical domain containing protein| Version = NM_001053422.1 GI:115446214 GeneID:4329403| Length = 490...")
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Gene Name

Os02g0495400

Description

Armadillo-like helical domain containing protein

Version

NM_001053422.1 GI:115446214 GeneID:4329403

Length

4909 bp

Definition

Oryza sativa Japonica Group Os02g0495400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:18185072..18189980

Sequence Coding Region

18185388..18185395,18186133..18186364,18186468..18186539,18186639..18187664,18188272..18188526
,18189561..18189851

Expression

GEO Profiles:Os02g0495400

Genome Context

<gbrowseImage1> name=NC_008395:18185072..18189980 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:18185072..18189980 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggtccgcccaagaactcgccagcgcttgcacgggcgcggccgtggaagaagtagaactgcttcgcgtcgtcgaggcgaacgcaagggacggcatgggaggcagccgcggggagagctcttccgcgcctccaccgcctcctcggtcaagagtgctcaggcagggagggctcgaggaagaatacgccaagaactccccctcccctctcggattcgcaccaagactcatccgccacgacagacagacatcgtacgaacttgcaagcacgtcaagaccaccagcacctgagatgggagaaccacttcgtatcatcacaaagaaagcaatgagcgagaaaaacagggcttacacaggaggcaatcaaggtagatcctcctctgccctgctaccacaatcaagattctggcaagggatgtgcgaggaagccaagaaggttcttggcatcgctaagtactcttcctccccctcaagattggctgcaagaatcctttgtgacaagcaggtgttgcctgaatctgcaggcacatcaaggccagtgctagagtttgtggatgaatcataccagcagtggttatgttctcaaaaaagcactagcttagtcgctgacgtgattgctgcagtgtaccatgatcagtctgtcctttctccatctgcctctactggaacactgtccagcctgttggtaccttcagaggaaaaaattcaagctatcctaggaaacttagggaaatcggtgttgtgtacagaggctttgcaccagattcggatactctgcgattccagtaagggagcacaatctttcctcaacaagtgcccagacatgatacaagtgttgatagatctaactacggaatggaaatcgatatggacatgggctcttgaggaagagaggctgagcattgtccttagtttgtcaattcacaggccaaacagggagaggatagctgcgcagaaaaaattgccatgtttcctcaaacagactgttgaagtggcaattgagtctggtgctagtgcagcagcatctttggtgaaggtagcttctatagtttccatcctgtcagagtttgacatgttcaggaaaagtgtgctggatattggtgtagtgacactgttgtgtaatctgctcaactttgagaacgacgctgtaagaaaagaagctgccattgctgttcttgcactctgcggatatattggaaacaacatggtcactgatgatgtcctgcttctccttgactatctgccaaaaggtccatgtgtgctggaggtgatctgcaatcagactgtagttgagcagttggttaacattgttatggctgaacatgaaagtgggctggtaacatctcaaggcatttactctgcactttccttgattctggtcattactcagaatgatgtgagtaaaatgaaggtggagcacatggagaattttatgaagtggttgcgagagctgtcctcaaatgaattgccaatgcagacaatgtttcagctgattgaaataataagccttttgtcacaaaggttgtattctcataagcctaaggaatttgttgttaagtggcgggatgatgatgatcagatttggtaccctttatatgccgaagttaccattggtcggcctatctcaacaagcaaagtggcaaggagaagagaatggactgacataaggatagttcgtaggttgaggcctctcagagctcaagagaaaatgctgacaaagctcgagttttgtgaccggtatcaaaactacatacaagggaaaaatacatacaagcaactgtacagggttgccatggactgcaatggttccaaaattgctccgctgtcctttgtcaggaaaaatcatgcagtacccggtgataattgcaaccggccagacttttga</cdnaseq>

Protein Sequence

<aaseq>MRSAQELASACTGAAVEEVELLRVVEANARDGMGGSRGESSSAP PPPPRSRVLRQGGLEEEYAKNSPSPLGFAPRLIRHDRQTSYELASTSRPPAPEMGEPL RIITKKAMSEKNRAYTGGNQGRSSSALLPQSRFWQGMCEEAKKVLGIAKYSSSPSRLA ARILCDKQVLPESAGTSRPVLEFVDESYQQWLCSQKSTSLVADVIAAVYHDQSVLSPS ASTGTLSSLLVPSEEKIQAILGNLGKSVLCTEALHQIRILCDSSKGAQSFLNKCPDMI QVLIDLTTEWKSIWTWALEEERLSIVLSLSIHRPNRERIAAQKKLPCFLKQTVEVAIE SGASAAASLVKVASIVSILSEFDMFRKSVLDIGVVTLLCNLLNFENDAVRKEAAIAVL ALCGYIGNNMVTDDVLLLLDYLPKGPCVLEVICNQTVVEQLVNIVMAEHESGLVTSQG IYSALSLILVITQNDVSKMKVEHMENFMKWLRELSSNELPMQTMFQLIEIISLLSQRL YSHKPKEFVVKWRDDDDQIWYPLYAEVTIGRPISTSKVARRREWTDIRIVRRLRPLRA QEKMLTKLEFCDRYQNYIQGKNTYKQLYRVAMDCNGSKIAPLSFVRKNHAVPGDNCNR PDF</aaseq>

Gene Sequence

<dnaseqindica>4586..4593#3617..3848#3442..3513#2317..3342#1455..1709#130..420#gcgacgcgcgcggcgcacgggacgggggagcgctcggctctgccgcggtatgtacgagcgagagaagcaagcaagcacgggacgggggctccttcgccgggaggagggaaaggcagaggcgggacgggaatgcggtccgcccaagaactcgccagcgcttgcacgggcgcggccgtggaagaagtagaactgcttcgcgtcgtcgaggcgaacgcaagggacggcatgggaggcagccgcggggagagctcttccgcgcctccaccgcctcctcggtcaagagtgctcaggcagggagggctcgaggaagaatacgccaagaactccccctcccctctcggattcgcaccaagactcatccgccacgacagacagacatcgtacgaacttgcaagcacgtcaagaccaccagcacctgaggtgagtgctctatgcgttcttggcattctgattgagttgcaactctgctactgcttgctggtcaggttttgtctctgttgggttgtttcactcttcttcctttcctgttcattcgcggtgaggaactattacgggaagccaattgcgctgatttctgagagcctttatctattattatggtgcaagaacgagctgctgttcaactttcttgcctatataatctcattgaaacaatcaaacttgtgaaactttcttgtgcctcttgatgttcattgcacaatatggagagctctttacgaaatcaattatgctctgtatgtttctgtttcccttcatttatagtgctgcagtattgtatagtcgaatgtaatctcaagctcttgagctgtatgtcatcttgtttctgacgagtagaagcatgcaacagaggaactaaagaatattttgctagtattttccatttccatctgtgcattgcatgattgcatcttgattccctgtattgcttttaaaaatagttatgctaaaattttatgtgaccggttacaatcatcatagtgtttctttctttgtaagaaataatcatcaaattgttggtctggttatccatgtaaattccagttccaaatgatttattggtactgtctaaatgatcacattcagttattgtgttctgttattgtaaaatgtgtttcagtccggcggtatcttctggaactatctgggcaagtcactcctttttgagggccattatgtattttggttcaagaacaagacactatttgttctacttgccctatataattggctttacacaatcaaacttctgtaactttcttgtgcctctttaggaaatcaattatgctctgtatgtttttgttctctaggaatacccaccgcctagtttattggccctaacataatcacaaccatacgcattattacactgctccccggaaatgtttggattattacacttatttgggagaaaatttagtccaatggcctcatgtaaaactgttgcacctcatcagatgggagaaccacttcgtatcatcacaaagaaagcaatgagcgagaaaaacagggcttacacaggaggcaatcaaggtagatcctcctctgccctgctaccacaatcaagattctggcaagggatgtgcgaggaagccaagaaggttcttggcatcgctaagtactcttcctccccctcaagattggctgcaagaatcctttgtgacaagcaggtgttgcctgaatctgcaggcacatcaaggccagtgctagaggtaagcgactcagaatgaatgcttcaaatttctgctgtctttcttttgatatataacgtttatcttcataattagttaaacatgcacgtcatacattatgtagaactagttcaaagggacttttgtgctgctacttacgtttgctggtctatcttttgcaaataattgtgggttttgttaaactcctgccttatgatgatccagcatgttgcccttcatatattgtgctataatattggaatgtaatatgtaactcatgagttgtatgtcatgtttctgacaagtagaagcatgcaacgaggaactgaagaatttttttgctagtattgtctatttccatttgtgcattgcatcttgattcactgtattgcttttagaaacatttatggaactgtcgtgtgactgtttacaatcatcaaagtgcttttttcctttgttaggaatggttgtccgtgtatcctgttcaaaatgatttatcggtactttctgaatggccacatgcagttattgtgttctgttagtgtaaatgtgtttcagtctggtgattcttctggaattgttccgccatttagttatcattaacttttttctatttgcttcattgcagtttgtggatgaatcataccagcagtggttatgttctcaaaaaagcactagcttagtcgctgacgtgattgctgcagtgtaccatgatcagtctgtcctttctccatctgcctctactggaacactgtccagcctgttggtaccttcagaggaaaaaattcaagctatcctaggaaacttagggaaatcggtgttgtgtacagaggctttgcaccagattcggatactctgcgattccagtaagggagcacaatctttcctcaacaagtgcccagacatgatacaagtgttgatagatctaactacggaatggaaatcgatatggacatgggctcttgaggaagagaggctgagcattgtccttagtttgtcaattcacaggccaaacagggagaggatagctgcgcagaaaaaattgccatgtttcctcaaacagactgttgaagtggcaattgagtctggtgctagtgcagcagcatctttggtgaaggtagcttctatagtttccatcctgtcagagtttgacatgttcaggaaaagtgtgctggatattggtgtagtgacactgttgtgtaatctgctcaactttgagaacgacgctgtaagaaaagaagctgccattgctgttcttgcactctgcggatatattggaaacaacatggtcactgatgatgtcctgcttctccttgactatctgccaaaaggtccatgtgtgctggaggtgatctgcaatcagactgtagttgagcagttggttaacattgttatggctgaacatgaaagtgggctggtaacatctcaaggcatttactctgcactttccttgattctggtcattactcagaatgatgtgagtaaaatgaaggtggagcacatggagaattttatgaagtggttgcgagagctgtcctcaaatgaattgccaatgcagacaatgtttcagctgattgaaataataagccttttgtcacaaaggttgtattctcataagcctaaggaatttgttgttaagtggcgggatgatgatgtaagtatttataagccataatagtacattttctcctttaatacagttgtggtatcctttttcctgcatttgtcataagttctttctacacaattgcaggatcagatttggtaccctttatatgccgaagttaccattggtcggcctatctcaacaagcaaagtggcaagggtatattatcaattatgttatcatgagtattcgagaaaaaaaatattatgcttgccacatctcaattttccattgtagtaatgcaatctatcttgttgtgtagagaagagaatggactgacataaggatagttcgtaggttgaggcctctcagagctcaagagaaaatgctgacaaagctcgagttttgtgaccggtatcaaaactacatacaagggaaaaatacatacaagcaactgtacagggttgccatggactgcaatggttccaaaattgctccgctgtcctttgtcaggaaaaatcatgcagtacccggtgataattgcaaccggccaggtaactgtatggaactatctatactgttcttgccatatttcctcttggaattctgttggttttactccttgcattgggccggcctgcgatgcattaatagtgtgattaggtgttaatccatgcagcagtttaataccagcaagtttaatactatataggatcctgaagacctatcattccaaatctcaatgtccactgtaaattttgataggcctctataaaattcgaatatttcagtgtaagttttatatataccattgtaagtctcaaatgttccactgcaagtttcatagatactcgtaattttaacatattacagtgtaagttctatatacccatcgtaaatttcttaggtgctcaatgtaaattttagatatttcttaggagtaattcataagtatgcatttaatataattgagggtacatatacgctaagtcgctaacatgtagtatagactatagaggtactgatgcaagtcaactagaatgctacttcttgcttgccttgttctaaaaaatgattttttttttctggagacatcctatgatcgaggtaagcccactaggcctatatagctaatgcgctaatcttatgagcatatcagacaacctggttagaaatttgactgatttctcaattaaaatgtgtctacagatttttagcaaaattgtaactgtatttgtttttttcctagcaatatacagttatgtaatctaaatcaattttattttatcagacttttgaacgagtctacatcaaagagtggtttaccctgcatgggcatgtctgtccaatcactcaagagcctgtttatcaattgttctaaggaatcacagattacgtgattatttggaatattggcgggattcagtccaaatggtaacatccaaggtcacgacatgatgaagggtgtcttgactttccaaaggctactattacttgtgcagagtgttgctgctatgtaaaaagacaagaatgtaattgaattcatattttcagtgttgatttttttcccattgacatgtccagttgaccatggtgtttttttaatatttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0495400, RefSeq:Os02g0495400