Os02g0504500

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Revision as of 02:31, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0504500| Description = UBA-like domain containing protein| Version = NM_001053447.1 GI:115446264 GeneID:4329431| Length = 5409 bp| Definit...")
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Gene Name

Os02g0504500

Description

UBA-like domain containing protein

Version

NM_001053447.1 GI:115446264 GeneID:4329431

Length

5409 bp

Definition

Oryza sativa Japonica Group Os02g0504500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:18709618..18715026

Sequence Coding Region

18709734..18709901,18710041..18710191,18710292..18710387,18711105..18711181,18711705..18711784
,18712294..18712354,18713231..18713298,18713390..18713471,18713630..18713716
,18714087..18714164,18714414..18714533,18714632..18714808

Expression

GEO Profiles:Os02g0504500

Genome Context

<gbrowseImage1> name=NC_008395:18709618..18715026 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:18709618..18715026 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggctgtcgctgcggtgcggcgactgcggcgtgctgctgcggagcgtggaggaggcgcaggcgcacgccgaggccaccaaccacgccaacttctccgagtccaccgaggccgtcctcaacctcgtctgcgccgcctgcggcaagccctgccgctcccagaccgaggtggacctgcacaccaagcgcacgggccacacggagttcactgacaagaccatggaggcggccaagccaattgatctcgaggcggcgccgccgaagccggccggcgaggccatggatgtcgatgcctcggcaagcgccgagccacaagagatggtggcgccggaggttaacaaggagatgctggcggacctcgaggcgatggggttcacgacggcgcgtgccactagggcacttcatttttctggtaatagcactattgaaggtgccattaactggctttccgagcaccaagaagatccagatattgacgaaccgcttctggtaccggctaatacaataactgaggctaataaaccctctttgtctcctgaggaaatgaagattaaagctcaggaattaagggaacgtgctcgtaaaaagaaagaagaagaagagagaaggatggaaagagaaagggagaaggaaaggattcggatcggtaaagagcttcttgaagccaaaagaattgaggaggataatgaaaggaaacgcatgatagaactgcgaagacttgagaaagaagaggagaaaagagctagagaaaaaatccgtcagaaactggaagaggacaaggctgaaaggagaaggaaacttggattgcccccggaagatccagctgctcctaaaccaagcgcaccacctccggttgaagagaagaagagggcattacctgtcaggccagccacaaaggccgagcgcatgagggattgcttaagaaatcttaagcagcagaacaaggatgacgatgctaaagtgaagagggcttttcaaacactccttacctacattggcaatgtagctaaaaatcctgacgaggagaaattcaggaagatcagactgaccaacgctacatttcaggagagggttggcaatctgcatggaggcatagagtttctccagctctgtggatttgagaaacttgaaggcaacgagttcttgttcttggcaagggacaaggttgacaaggccgtcctgaacactgctggagccgagctgaattctgctatcactaatcctttctttggagtcctttaa</cdnaseq>

Protein Sequence

<aaseq>MAGLSLRCGDCGVLLRSVEEAQAHAEATNHANFSESTEAVLNLV CAACGKPCRSQTEVDLHTKRTGHTEFTDKTMEAAKPIDLEAAPPKPAGEAMDVDASAS AEPQEMVAPEVNKEMLADLEAMGFTTARATRALHFSGNSTIEGAINWLSEHQEDPDID EPLLVPANTITEANKPSLSPEEMKIKAQELRERARKKKEEEERRMEREREKERIRIGK ELLEAKRIEEDNERKRMIELRRLEKEEEKRAREKIRQKLEEDKAERRRKLGLPPEDPA APKPSAPPPVEEKKRALPVRPATKAERMRDCLRNLKQQNKDDDAKVKRAFQTLLTYIG NVAKNPDEEKFRKIRLTNATFQERVGNLHGGIEFLQLCGFEKLEGNEFLFLARDKVDK AVLNTAGAELNSAITNPFFGVL</aaseq>

Gene Sequence

<dnaseqindica>117..284#424..574#675..770#1488..1564#2088..2167#2677..2737#3614..3681#3773..3854#4013..4099#4470..4547#4797..4916#5015..5191#ggtctcgtctcctcgtcttctcgccgccgccgcgagcggaatccccctctctccgtctaaacctcgccgccgcggcgaagcaaaagcacctccctcttcgccgccgcccgccggcaatggcggggctgtcgctgcggtgcggcgactgcggcgtgctgctgcggagcgtggaggaggcgcaggcgcacgccgaggccaccaaccacgccaacttctccgagtccaccgaggccgtcctcaacctcgtctgcgccgcctgcggcaagccctgccgctcccagaccgtgagatccccccatccccctccccaccttccctttggttttcactttctcgatcgaattccgccggattcggtggttctcgatccgattttagtctcacctggttggttgtgtggatctctgatcttgcgcggcgcaggaggtggacctgcacaccaagcgcacgggccacacggagttcactgacaagaccatggaggcggccaagccaattgatctcgaggcggcgccgccgaagccggccggcgaggccatggatgtcgatgcctcggcaagcgccgagccacaaggtgaggtggttgttgttgagatgatcgaaagggttatgatctgtggccgcctttgggtggcaaagagtgttgaatcttggtggctttttgcttccggcagagatggtggcgccggaggttaacaaggagatgctggcggacctcgaggcgatggggttcacgacggcgcgtgccactagggcacttcatttttctggtatggtgtagcaagatagtatgtcttagttcaacatttgtaccatgctgtcaagttctttctccaacttagattttatttattagcaaattattactagagtactccctccttcccataaaaaaccgaatcttagtgtccagattcatccctaagattcggttttttatgggacagaggagtagactgcagatgcagtagaaaagtattaactgttcaagtgtatatatgttcgctcgtgcgactgagctatttgagactttgatctaagaaagtctcggctagaaggctttttatcacagtaaattctggaccaaggatttcagcatatggtgaataaaggaacgacctcgattggaaagtatatgctttgctattgagtcttgcagatcaaataatgctagtgcttgtgcattgcaacaagatacattatgagtgcaaaattagacatacattctgcattgtagtgcctgtggaccgaaatttacaatatgacagaaaaaacaaggcattatatatgcattgaaagctgaactatttgctgtgcttttggacaaaactgtctcagtggaccagaagtcaataagactacgttttgcagtcttacttatatattatgattgtctcatctatattagttaaataaacataacaccttcagtaagcaaaccatgattaattcataactttgtttgcacccatttaattttcctctaggtaatagcactattgaaggtgccattaactggctttccgagcaccaagaagatccagatattgacgaaccgcttctggtatgatgaatttatattttttgttgctgattaattgattatacctttatttgttttggtatgctggtgtgctaaattgccccttgctgaaaaaataatatgttttggatattaagtggttattttggtattattttcatcgtgcttgtgtagtgctacactgaattgcactgtctgacctctgacattctatccatggagtttcagtaatacccaaaacttttactatatttatttattatttgtgcagctcaatgtatttactgtaacaatgaaaacgcatttcaaacatttgaaaaattggcataggttgtccattttggttttttttcccctgcgtatgcccatgtatctaggaccaaacttgcacatttgaatatatctaacctcccacttcagaggttcaattaattgtgtccaatgggagtaatagatgaattctttctgtgttatacctatacttgtccagaaaatttttgctctccagtacataactttacacttaccttctttcatctctcaggtaccggctaatacaataactgaggctaataaaccctctttgtctcctgaggaaatgaagattaaagctcaggaattaaggtgtgttcatgaacttattgctttcttattatctttaatgagttgatggttttatatatatcttcagaaaattgcattgacttgtgtctgtctgtagcactaccttttcctcgttgaaatcagttcaattgacatttaagtacttgtatgctttgtcgtatgtggttgggctttgtaatcgcatgcattggtacgacaatttttttcactgctttaaaaatgataatttttattggacttgaaactcaatataaatgacaatagaattctcatatttaatccctgaagttctatacttttattacattccctacgtattttctttgcacatgataacccccaatatgcagattgtgcacttttttatcgtaccgccttaaacaggaactttgttcaatatttgctctccgtttgtcatattaacactggaacaaccacagatctggcgttatgattctgattttaactttttgttactaaactattgagtttactcactcgatttgtagggaacgtgctcgtaaaaagaaagaagaagaagagagaaggatggaaagagaaagggagaaggtttgttctcaacttctttttaccttatttaatgtatttagaaatgtatgaatcaagattacctgcagcacatttatatatctggtttcttctgtgcagttagatgtgtttttagtcagtatcttgcacagcatatccaaaaaagacatgcattatgcttagtcattacaatcaatagccctttatgatgtattttcatgtaactttgattccacctgccagcaatcttgtacaataacataacacaaatagtttgctggaacttattgattttgtttcatgaaatctcatctcaaatttgtcaatttgtatgaagaaatctgcataagattacttggaagtgcaattatgtctgaagtactgagctagtcttaaatttgttgctgtaatatgtagagttgaaggtatagatggtatctgctgttttcttttgtcacgttatcatgtctttacagggacttcagcctactgtcccctattttgatataagctgctggataagaagtgcaaattatactatatttttcatctgaaaatactgatgagagttgatatcaaagatgaaaattttctctcatttgtctccgttctactagacaacaagtacaaattacgctatgcccttcatttgaagataatgatgagcactaataccaaagcatgaaaatcattggttgttcccctcaaattccagttttatgtttgatgtgatgtgatcttggcattttccagttacacctttgcaatattataattttggtggatctttttccaatattacaattaatagcatattattgttccttacattatatgtggcatatatttctgttcattttttgccagtattttatcttacatattagacatttttaggaaaggattcggatcggtaaagagcttcttgaagccaaaagaattgaggaggataatgaaaggaaacggttggttctttgttccccttttgatttttctgtattttgactagtagtattctgttctccaccccttgactgtttttaccaccacctgcagcatgatagaactgcgaagacttgagaaagaagaggagaaaagagctagagaaaaaatccgtcagaaactggaagaggacaaggtttccatcttctccatctcatcatttcttctattatttatataagaatttctggcgttacatatttgcttcgacataacctggggatatttgtatggttgtcatgtaagtgtcacactctggcaattagacctcaattatttctttctaattaccaggctgaaaggagaaggaaacttggattgcccccggaagatccagctgctcctaaaccaagcgcaccacctccggttgaagagaagaaggtacacctatcgtaattagcagttgatccgaatttcctttcataattagcagttgatccaaatttagtcatttagaccaacctactgccagtttgaacttgcaccctgtactggtcttgagaacctgaattgcctaactgaaccaaatcgctgagatgaatgcgagcaaaaattttatctgattctgaatttctcaggaaacattcagatcttatgccttacatcagtcaatggatttcttgttggaacagcttttgtagaggcctttagatccgaacttagtaggccaaagaatataattgcagattgtataaataaacaatgttttgaaatcattattgccatctaactctgttctatggatttccagagggcattacctgtcaggccagccacaaaggccgagcgcatgagggattgcttaagaaatcttaagcagcagaacaaggtagcatgtagttttaacttgaaatcatcttctatgttactcatatttgtcaggcagattgacacatatccttcattgcatgtgaatacagatgcaactgtaaagacttgagaattctattgtttgttgaaactataccaaaaattgtgttctccctgtagttttagagtggaatcattcaatgctgatataatcatattatatgtttggtattcaatttgacccaattatgggccgtttttgcaacaggatgacgatgctaaagtgaagagggcttttcaaacactccttacctacattggcaatgtagctaaaaatcctgacgaggagaaattcaggaagatcagactgaccaacgctacatttcaggtgaaaataattactgtacatattgacctggtaaaatgatccgctgttatcctttcaagaacaacacgctacttataatctgtttcggtacaatgcaggagagggttggcaatctgcatggaggcatagagtttctccagctctgtggatttgagaaacttgaaggcaacgagttcttgttcttggcaagggacaaggttgacaaggccgtcctgaacactgctggagccgagctgaattctgctatcactaatcctttctttggagtcctttaaatcgtatagaatttccatgtacacttgaacctctctgtttcacctttgcttgaagcacaaatgcacagaaatattgatattgagcgaatgatctttcactgcgctcacttctggtcgccagattgcacgagatggaaggatcttggaaagaatttcccaatatatttcttccaacgattaaagcaataaaacataaatacccacatgaactttaagct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0504500, RefSeq:Os02g0504500