Os02g0508000

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Revision as of 02:31, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0508000| Description = Trimeric LpxA-like domain containing protein| Version = NM_001053459.2 GI:297599283 GeneID:4329443| Length = 3636 bp...")
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Gene Name

Os02g0508000

Description

Trimeric LpxA-like domain containing protein

Version

NM_001053459.2 GI:297599283 GeneID:4329443

Length

3636 bp

Definition

Oryza sativa Japonica Group Os02g0508000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:18917979..18921614

Sequence Coding Region

18918201..18918665

Expression

GEO Profiles:Os02g0508000

Genome Context

<gbrowseImage1> name=NC_008395:18917979..18921614 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:18917979..18921614 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtatgtaacctgtaatatttgtgctaggtacttccataagccaaggtttcagttaatctcattcctaagttatgtattatgtgcaggactaccagctgacacccttgttgaccggtatgtgacagtgggtgcatactgtctgttgcgctcatgcactattgaacctgagtgcatcatcggtcagcattccatcctcatggaaggttcattggttgaaaccaactcaatccttgaagctggctctgtcctgccccctggaaggaggattccaactggtgagctctgggctggtaatccagctaggtttgttcggaagctaaccaatgaagagatcatggaaatcccaaagctcgcggtggcaatcaacgatttgatgcaaagccatttttcggagttccttccgtactccactgcttatttggaggtggagaagttgaagaaatcgttttcaattcctctgtaa</cdnaseq>

Protein Sequence

<aaseq>MYVTCNICARYFHKPRFQLISFLSYVLCAGLPADTLVDRYVTVG AYCLLRSCTIEPECIIGQHSILMEGSLVETNSILEAGSVLPPGRRIPTGELWAGNPAR FVRKLTNEEIMEIPKLAVAINDLMQSHFSEFLPYSTAYLEVEKLKKSFSIPL</aaseq>

Gene Sequence

<dnaseqindica>2950..3414#gtcttctttcttcttcttctcggggcagcacgaacccatcacaccgtgcgcccactacccccaacccccgcacacctccccgaccaccgccatggccgccgcctcgctctcgcgcctctcccaccgggccgcggcgccctccctccgccgcctcctctccgccaccgcatcggccccttcccccgccgcggcgtcgcccccaccgccgcccccctccgccgccgcggccgccgcggcgggcgcggatcgggtgcggtgggactaccgcgggcagcgccagctggtgccgctcgggcagtggatgcccaaggtggccgtcgacgcctacgtcgcccccgaggccgtgctggccgggcaggtcaccgtctacgacggcgcctccgtgtggagcggcgccgtgctgcgcggcgacctcaacaagatcaccctcggcttctgcgccaacgtccaggagcgatgcgtcctccacgccgcctggtcggcgcccacaggtctctcaccatccccaaccctcccatccctcatccccccacctcttctggaatctcgtctagtgcccagatctgaccaccaggtgattgtctgaatgcttccgaggtgttcttgaatgatctagtattagttgcgatgcgtttacatgttctcgcttggattgagaaatccggcgtacctaatcgtttgatgatatcttctcggcgcgtcctttagagttgaccaaattcgtgtgcgatgcttttctgctggacatgataagaatggtgatttgatatataggagtagatcacaagggtgcagctagctgcaacattgtagatgcctttgcaatctagtacatagcattcatgggttgagaaacaccctgtacttctgtgttcatggtgttctttgaactctggcattctggcattgtttctgagaaccttaattattcctgcacttcagatgaatgattaaccttagagtggtgtcatggccttgtcaatgatgacttggttagcggtatctatttagggacatgtataattgtgtaatttgagtgtacctgtatgtttggttttttaccataactgcaagtgcaaggttggtgggggtgtgggggaacagccctccatgcgttcaacatttggttaatttgtaagcgcagtccaaattcaaagttgctaagtgtggggaactggagagcagtgtgctttattgtctgattgtgtctaactgtgttcatagttgctgttgggtggctggaacagtgaattctcctgttactaacttgtaatgctatttatagttagttcatggatcctgaaattttgattctgcatgatgttcagcgtttctagctgacataataaagaaatttcttagattgtgaggttgtacaaggtaattgacagaactgtattgtaaagaactaaagcattgaattttttgagttttgatttattatttttatgtttgagaatgttttacccttgtcttcactggtataaataggggcatgtcagcctgtgatgtggtgatatgtttgagaactttgcttttgcatacttgtttatctgtaagcacgaggacacatggtatctgtcttcttaaagtattaagttaatgttaccaattattatccccactagcaacctgaaaatcttggcctggactgtctatagtgttctgttttggagtataaaagcaatgcactctagtgctattgaacttgaactgggatgagttataggcaacgttttcctatttgtgccaatatgtgttgtctttttgtttatctggcacaaagtgaaagacacattcaaaaaaatccaaggccgaccaaaactcaggatgccaaattgccaataaccccagctggctcactatagttaattggtaccatgttattagatatgtaaatttcataattaattggtcgtggactcgaggcttttgactcgttgttcatgaggcagtttatggaactgaggatgctgatgttagacggcataaataatacttatttcttcctctttttttttttgctgggaataacacttaacagtaatgctcttaaccatatgcacataagtagtgttcagtggttacatacttacatgggcatgttcatgtctgttcgtatttgccaactattgtgtttatgcgcatatttgatgatgattaaaaatatcattagtaaatggatagctgattaatgctttatgttcattgaaatatgattgactacaactataaactggcttgatgacccttgattggatcatacaaacattactaatcatttcttctaataccgttccaggattccagcacatactgatgcatccttttttgtgtccaccttttgtttttagcactgtagggcatgactgttcatatacggctctagtgaaacttttcaaaaggtcgggtgtggtatattctgcaccatgctcaaaggaccaactggctgcaatactaaatagataattgctagctaatcttccttgagtccggttttgattggcttcttcgcaaccatagttgaatatccctgctataggatgacaatatttttgtgtattgagcttggattctgaatcattggttcttatggggtaagtttgcatttgatattttgatgccacttaaatcaaactgcatgaggatcaactctaagcacatgtgcttatttgtaatctttgactccaattttgggtcgtgagaggtcaaatctcatgttagaacttacccactatcaatttgaccatggaatttccaatctggtggatagtatcttaccttttttttttttgccttaaggaaaaatggatagcatattagtgcctcttttttcctttgtgctaatttggtctggcaatatgtcaaagactaaatgcctttggcagtaaacttgttgctagtatccatggaacaattgggacttcacttctgtgtacatgcccttttatgtatgtaacctgtaatatttgtgctaggtacttccataagccaaggtttcagttaatctcattcctaagttatgtattatgtgcaggactaccagctgacacccttgttgaccggtatgtgacagtgggtgcatactgtctgttgcgctcatgcactattgaacctgagtgcatcatcggtcagcattccatcctcatggaaggttcattggttgaaaccaactcaatccttgaagctggctctgtcctgccccctggaaggaggattccaactggtgagctctgggctggtaatccagctaggtttgttcggaagctaaccaatgaagagatcatggaaatcccaaagctcgcggtggcaatcaacgatttgatgcaaagccatttttcggagttccttccgtactccactgcttatttggaggtggagaagttgaagaaatcgttttcaattcctctgtaagagctctttttttttgtcaccttctccgccaaatgaacgagaaaataaagcagcccaaagtacctagatgttttgtattgaatctaacttgtaacttgggtggatgtgttacgttgtgaatttttcgttcattgttgttgtcaacttggggacaggcgttaaggaccatgtctgaatgcattgctttcgcttctcactaccggtattttccggctgggaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0508000, RefSeq:Os02g0508000