Os02g0514766

From RiceWiki
Revision as of 02:31, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0514766| Description = Similar to 2-oxoglutarate dehydrogenase E2 subunit| Version = NM_001186054.1 GI:297721240 GeneID:9266803| Length = 3...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0514766

Description

Similar to 2-oxoglutarate dehydrogenase E2 subunit

Version

NM_001186054.1 GI:297721240 GeneID:9266803

Length

3270 bp

Definition

Oryza sativa Japonica Group Os02g0514766, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19328894..19332163

Sequence Coding Region

19328894..19328939,19329007..19329062,19329163..19329207,19329302..19329553,19329664..19329758
,19330192..19330282,19330434..19330544,19330634..19330828,19330905..19331077
,19331531..19331559,19332096..19332163

Expression

GEO Profiles:Os02g0514766

Genome Context

<gbrowseImage1> name=NC_008395:19328894..19332163 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:19328894..19332163 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgaatccataaccgatggaacccttgccaccttcttaaagaaacctggtgatagagttgaagctgatgaacccatagctcagatcgaaactgataaggttacgatggatgttgctagtccagaagctgggataattgaaaagttcgttgcgagtgaaggtggcattgttactccaggtgtcaaagttgctatcatatctaagtctgctgctcaaagcaagacacatacacaatcatctgaagatacctcccagaagcatagcacaaaaccaccttctacaaaggaaaacaaggttgaggctaaaccaccaaaagtagagtccagcacaacacacgaatcaaaactaacttcctcttcagaaccacaactccctcctaaggaaagagagagacgggtgccaatgccaaggcttaggaagcgtatcgcaaatcgtttgaaggattctcagaacacttttgcaatgctaattacattcaatgaagttgacatgactaacctaatgaagctactttccgattataaagatcagtttgttgagaagcatggtgtcaaattgggcttaatgtcttgctttgtgaaggctgctgtttctgcgcttcaaaaccaaccaattgttaatgctgtcattgatggtgatgacatcatctacagggagtacattgacatcagtgttgctgttggaacttccaagggtcttgtggtgcttgttatccacgatatagatgcaatgaattttgctgacatagagaagggtataaacaaccttgcaaagaaggcaactgagggggcacagtccatcaacaatatggcaggagggacctttaccatctcaaatggtggtgtttatggaagccttatcagtacacctatcattaattctccacagtcatcaatcctcggaatgcattccattgttcaacgtcttgtggttgtgaatggcagtgtccttgcaaggccaatgatgtaccttgcactaatgtatgaccataggctgatcgatggtagggaagctgttctcttcttgcgccgtatcaaggatgtggttgaagatccacgaagccacaacaagttgaaagaggccacaacaaaactccaaagtcacagctgcagcagacgcaaccaccccttggtgacctggactgagactcgggactaa</cdnaseq>

Protein Sequence

<aaseq>MGESITDGTLATFLKKPGDRVEADEPIAQIETDKVTMDVASPEA GIIEKFVASEGGIVTPGVKVAIISKSAAQSKTHTQSSEDTSQKHSTKPPSTKENKVEA KPPKVESSTTHESKLTSSSEPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLITF NEVDMTNLMKLLSDYKDQFVEKHGVKLGLMSCFVKAAVSALQNQPIVNAVIDGDDIIY REYIDISVAVGTSKGLVVLVIHDIDAMNFADIEKGINNLAKKATEGAQSINNMAGGTF TISNGGVYGSLISTPIINSPQSSILGMHSIVQRLVVVNGSVLARPMMYLALMYDHRLI DGREAVLFLRRIKDVVEDPRSHNKLKEATTKLQSHSCSRRNHPLVTWTETRD</aaseq>

Gene Sequence

<dnaseqindica>1..46#114..169#270..314#409..660#771..865#1299..1389#1541..1651#1741..1935#2012..2184#2638..2666#3203..3270#atgggtgaatccataaccgatggaacccttgccaccttcttaaagagtacgcatctatctatatgcaatttgagtggtcaaacttctttgtattcacatgctatctgatacagaacctggtgatagagttgaagctgatgaacccatagctcagatcgaaactgataaggtgattctgtgcactgtttattcttgttttcaacttctaagctattgttgctatcttttgcaaaattgttttcagaaaatgaaatacccttttatttcaggttacgatggatgttgctagtccagaagctgggataattgaaaaggtaacaaagagccttcccctgatttgttatttccatatttgctaaatatgattctttagtagattacttttctaaccacatcaatgcattacagttcgttgcgagtgaaggtggcattgttactccaggtgtcaaagttgctatcatatctaagtctgctgctcaaagcaagacacatacacaatcatctgaagatacctcccagaagcatagcacaaaaccaccttctacaaaggaaaacaaggttgaggctaaaccaccaaaagtagagtccagcacaacacacgaatcaaaactaacttcctcttcagaaccacaactccctcctaaggaaagagagagacgggtaaggccatatccatcacttagttacagtacatcatgataagatatactatgttacttcatattcttgactcttgcggttgcatacattttgtcaccatcaaaatgcaggtgccaatgccaaggcttaggaagcgtatcgcaaatcgtttgaaggattctcagaacacttttgcaatgctaattacattcaatgaagttgacatgtaagtgcatcattagttggattgcttatttcttgtacgtctgcttggttaatgtaatgcataagctgctggcttttggccaatttaagataacgggaataagctattcatcctagcgcgcaataatactccaatagctatagtattggttcttgttcatgccaataagttaacgtgattattgtgtaaatgaaacatcagactactatgtttagttgaggactagcatcaatgcacctcatatatttatgtgctagaagaaacggattatcaatggagtttgaatctatatggctatttcctgcatatgttacatcacctttttatttactataactttcagtgtatacaaggataaatttgctttgtgacattcatcttgttgctttcacttttctatatctgtttcaacatcatatgtactgtgatgtaggactaacctaatgaagctactttccgattataaagatcagtttgttgagaagcatggtgtcaaattgggcttaatgtcttgctttgtgaaggtaatgtttacccctttttttcttcttcttaatataatgatacacatctctctcgcgtgttcgagaaaaaaaaaacgcaatcttatgagatacttaaaccataattgtggcaattgtgtgggttgtactaaaaacccacttgcttttgcaggctgctgtttctgcgcttcaaaaccaaccaattgttaatgctgtcattgatggtgatgacatcatctacagggagtacattgacatcagtgttgctgttggaacttccaaggtatcgccacctgtttttctttatgttgactgccctaactattattttatgcaatctgttgtaatgatgtgacatgtcatttgttttagggtcttgtggtgcttgttatccacgatatagatgcaatgaattttgctgacatagagaagggtataaacaaccttgcaaagaaggcaactgagggggcacagtccatcaacaatatggcaggagggacctttaccatctcaaatggtggtgtttatggaagccttatcagtacacctatcattaattctccacaggtgctcacttgtttttttttgctgccttgtaattttgtttgtaagttccctctaacacgagctttatctaatgtagtcatcaatcctcggaatgcattccattgttcaacgtcttgtggttgtgaatggcagtgtccttgcaaggccaatgatgtaccttgcactaatgtatgaccataggctgatcgatggtagggaagctgttctcttcttgcgccgtatcaaggatgtggttgaagatccacgaaggttgctccttgacatatagttccatgcatcatagatggcctacaaatttcactcgtttcaaaataattgcatgaaaaagttgactcatgtcatgcttgcttatccccaaaaaaaatagatggttgcaggcctttagacttgtacaagagggcatttctttctttctttcttttgttgaggtattacattttaggaagatgttctctaatgttttaattttactagagagaaagacgattactatttaggtcaaatagaagctttggagccacattctactgaacttttggcacacaattgtgaaaatgaaatggcaaccaaacatgcttttatactccttgaagtttgcctaactagcttgtataggcggaattggtctccacaggatgtgcgggttggcacaataatattaaatatctgttaacttgtgattctcattggtttctacgatagccacaacaagttgaaagaggccacaacaagtttgtatacaataacatcatctgcatttccttcgttacatgtttccactaaaaccaatagcacaaatttctccgtattttgttctgcgttgccgtcattttttgtgtttggtgtattttagtagttggatatcaggtattgtaaagtttatgagttctatgggttaaacctcactgatgcaatgttgcatagtgctaatttccaattccatgtggcgtgccatatgattgtgaacaatcagacaatttcccctagcaaaaccattaaaaacctcaccctccatgtacttcaacaaaatgtgcaaaacaacatgagatgactactgcgtcagcacaacgattcttacacaggttgctcacagagaaaatgacggcttgttgttataaattgtaaccaacagttaatttttttcactaagtgaaaacaatatgtgtttgagagaactcaccagaactttgataaactactaggctaaacctctacactagccttttctacattatactaaaccagcattctcctattgcaaactcagaactccaaagtcacagctgcagcagacgcaaccaccccttggtgacctggactgagactcgggactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0514766, RefSeq:Os02g0514766