Os02g0515200

From RiceWiki
Revision as of 02:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0515200| Description = Conserved hypothetical protein| Version = NM_001053489.1 GI:115446348 GeneID:4329474| Length = 6415 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0515200

Description

Conserved hypothetical protein

Version

NM_001053489.1 GI:115446348 GeneID:4329474

Length

6415 bp

Definition

Oryza sativa Japonica Group Os02g0515200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19354112..19360526

Sequence Coding Region

19354446..19354456,19355125..19356055,19356401..19356454,19356887..19357117,19357190..19357397
,19357483..19357511,19357716..19357784,19357910..19357971,19358134..19358211
,19358321..19358393,19360213..19360338

Expression

GEO Profiles:Os02g0515200

Genome Context

<gbrowseImage1> name=NC_008395:19354112..19360526 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:19354112..19360526 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagtcgccgttgctgaggctgaagggcttcggccaccaccagcagcacagggagaggaagtcgcggcagccgcagccgcagccgacgccggccaagctcgacgagctcgccgacgccgcccaggatgtggaagaaatgaggaactgttatgatggcttcatttcagcagcagctgctacaacgaatggcgtatatgagtttgctgaggctttagaggaactgggaagttgcttacttgcaaaacctgtgctaaatgacgacgacgacgatagtggcagagtgttgatgatgctcggtaaggcccaatatgaactacagaaatctgcggatagataccgaacaaatatcatccacacaatcacaaccccatctgaatctcttcttaaggagctgcaaactttagaggaaatgaaacaacaatgcgacatgaaaagggacgcatatgaaaccatgagggcatcctatagtgacaaaggagggtcaaggcattccaaaaccgaatcattctccacagaacaactggacgcttcttttcttgaataccaagaggattcagcacttttcacatttcgcttgaaatcattaaagcaagggcaattccagagcctgttaacacaggctgctcgccatcatgctgctcagttaagttttttcaggaaaggactcaaatgtctcgaagcacttgaacctcgtgtcaaagcaatatctgagaaacatcacattgactataacttcagcggtctagaggatgatggttctgacaatgatggctacagtacttacgattcttgtagtgatgacggagaactgagtttcgactatgaaataaacgatagagaccaagattttcttacttcgagaggttcaatggattttgataaaagtgatcagactacttcaccaaagccaatcaaagaaaacaagcaggaagaggcaaaacaagcagaggccgaaatagtgttcccgcaattgaagcccgagttcgctacacattcagctccactttttgctggcaatttgcttgatgaaactgacaggcttcggcaaatgaggccatcctcaaccaaacactcgtacaggctccctaccccagttggtgctgacaaccccgtaccatcaggttcacacaggctgcatcattccgcgcaattcttcgaaacaaagccccatgccccgacgaatctgtggcactcgtctcctctgacaaaagactacaatggcgccatgcacaacgccgctaccaagccgtcgtcatcatcaagcaccgatgatctgaagaagctgaagagggagtcatggtcaggtccgatcccgatcaaggccgggtcaggcggcaagcccttctctcaggctgaccacaggccatcgcccaccatggcttaccctggtgcaatgcctgcggccaagccgcacgtccggcacgcgtcgtcgtcgtctgtgtcacccaaggtttccccaaagatgtcaccggtgccaccagcatcgtcgctgaagatcagcgagctccacctgctgccgctgcctccagccaatgtggatcctgtccggccttctggtctggtcggctactccggccctctggtgtcgaagcgcgcgccgacgccggcccgtgcctccccgaaggcgtcaagaacggcgtcgccgctgcctaggccgcctgcggccttggcaaggagctactccataccttccaacagccagaggacgcccatcatcactgtgaataagctcttggaggctaagcatagcagggagggcagtgatgcttcttccccaccactgactccattgtcattgtctgatttgtgccaccaggagaaggcagggaaggcagctgcaggcaacacaaggagaaaggaaaccttgtga</cdnaseq>

Protein Sequence

<aaseq>MKSPLLRLKGFGHHQQHRERKSRQPQPQPTPAKLDELADAAQDV EEMRNCYDGFISAAAATTNGVYEFAEALEELGSCLLAKPVLNDDDDDSGRVLMMLGKA QYELQKSADRYRTNIIHTITTPSESLLKELQTLEEMKQQCDMKRDAYETMRASYSDKG GSRHSKTESFSTEQLDASFLEYQEDSALFTFRLKSLKQGQFQSLLTQAARHHAAQLSF FRKGLKCLEALEPRVKAISEKHHIDYNFSGLEDDGSDNDGYSTYDSCSDDGELSFDYE INDRDQDFLTSRGSMDFDKSDQTTSPKPIKENKQEEAKQAEAEIVFPQLKPEFATHSA PLFAGNLLDETDRLRQMRPSSTKHSYRLPTPVGADNPVPSGSHRLHHSAQFFETKPHA PTNLWHSSPLTKDYNGAMHNAATKPSSSSSTDDLKKLKRESWSGPIPIKAGSGGKPFS QADHRPSPTMAYPGAMPAAKPHVRHASSSSVSPKVSPKMSPVPPASSLKISELHLLPL PPANVDPVRPSGLVGYSGPLVSKRAPTPARASPKASRTASPLPRPPAALARSYSIPSN SQRTPIITVNKLLEAKHSREGSDASSPPLTPLSLSDLCHQEKAGKAAAGNTRRKETL</aaseq>

Gene Sequence

<dnaseqindica>6071..6081#4472..5402#4073..4126#3410..3640#3130..3337#3016..3044#2743..2811#2556..2617#2316..2393#2134..2206#189..314#atagaggaacaacgaaagatcaagagagagagagagaggcgaaatcaaggcccttttcttttcttgcgatttccaccatcgccgcccaaagcaaaagattagataagcttaatccccacaaaattataaggattgttagacaggaggagtaatcgatcagagaggggagagggaagagagatcgatcgatgaagtcgccgttgctgaggctgaagggcttcggccaccaccagcagcacagggagaggaagtcgcggcagccgcagccgcagccgacgccggccaagctcgacgagctcgccgacgccgcccaggtgcgcgagtccatcgacttattgattaattgattgatttattgatttcttcctctcctcctcccatctatctcctgttttttttttttttttgggatttctgtgatcaaatcggcgtcaaaatcggatcttgggaggagccctatgcgaaattgcgatttttagccaccccccgcgttgttttccaggtggagtgcgctgttctttggttggtgcactcgtttattgattaggtgtggatgctcaaaatgattttactactagtagtattttggttattcaatgcggctggaggaacagagctcgaactgtttaaatagaaattgatccatcaattttcgtttttaattattttctgatggtcattggtggtcgtttagaataatcaaagctttgaacttgccccgtgttgattcaagcgtgcagaaggactaaacttttatttaatccaaaccagggtgtgaataaccgccggaaaccgcgcggttaccgcggttaccgcccgtaccgcgggggtacggttacccgtaccgcgcggtacggtttaataaaattcatccaaatttaaaaatttaaaaaaaaagaaaaaaatcaaaaaaaatagtgaaggtagtgcttgatttatagtgttttatggtgaagaaatttctcaaaaaagagtaatatttattcaaatttgagagcaaaacggagaataaatttgaaaattggaaaaagaaaaaaaaatgggccggcccgttactgtgcaacccattacacatcgcgcggtaaccgcgccaaaccgcgtggttaccgcgtcaaaccgtgcggtaaccgcgccaaaccgcgcggtttgcccgaatttttgaattcaaatttcgatttgtaaatttgtcgcggttttgcgcggttaccgcggttaccgccggtaaccgccgtaccgccgggtggcggtaaccgggcccccggcggtttttgaaaccctgatccaaacagtaggagcctcgtttaaattagtatatcggatgttcaaagtagagtagttgttaggctaacctccacgaaaacgacgtgcaacttctctgcaattttgccctttacgtgtttgcccgggagccattctgctcgcgggtcatgtctggtcaaagtctacgataggagaggacgacgcgtccatcggagaaagttgctgcgaagatagcaatcgattatatttaatataatctcggtcagctgttcgacgtaatcttgactggaactctggataaagtatgaacgcttatccaagaacacgcacgagatattccgttccgattccgcgtcggtctctggtgctgaattgggagttgaaccatgaacagagaggagtttctgaagtacgccagcttagttgcaatttctgactttccaccaattattggacagagtgacaggcaatgcaactaatcttgatatcttttgtgccatctgaatgatgacactgagaagcacttgcaatgtaatgcgccattaagctggagaagttgttctcaacagcctactgctactgttggtcaatgacagtgatatgacagaaactgtttttccctttacttcgccttatcagatatatgtctaagaggactgtgtgatccatgttttactgggcagcttataatttattctgctttctaatgggttcagcttgctgtatttggtacttctaccctttcttaggattgtggctgcctacaatttattgctggccagcaattaaatagtactagtctattggtaatgggaaatatttcctttgcattgttgcattcataactgaaatatggttttgcgtttgtctcaggatgtggaagaaatgaggaactgttatgatggcttcatttcagcagcagctgctacaacgaatggcgtatatggtacctcctgtttctaaattctaatgcttaacatggtttctgtcaacagttgatagcatgtttgtctatacatcatttcttaagttgatcatagtgtaatattgtgcagagtttgctgaggctttagaggaactgggaagttgcttacttgcaaaacctgtgctaaatgacgacgacgacgatagtggtgagttgtccattattaaccatatagaaattcatggtgtaaaacatcgcgttactagattctaaccactatgaaaaccatgtatgcttgtacttccttcagtccaaagtttccttttgttgactactgtaatcgtttttatgcttatttttttaccttcaggcagagtgttgatgatgctcggtaaggcccaatatgaactacagaaatctgcggatagatacgtaagttacttttgttgttactgtgaatttttaaaacaacaatttggaattcattatagttatttaaatttttttaccacgttacaatctgttggtgctgacacgcttttaaattggctatccagcgaacaaatatcatccacacaatcacaaccccatctgaatctcttcttaaggagctgcaaactttagaggtttgatatacaaaatttcctctgaaatctttgctcagttatgtattcttataattgaaaacaacaactgctaccactttataccaattgtttattggctactcattagttggttaattaggattgcctgtgaaccacaggaaaaacaatatgtttacatcaatgtagcatgatatgcttatacattttgtttgcattgcgcaggaaatgaaacaacaatgcgacatgaaaaggttcaaacacacctcaagttcattttcatttttggtcatttctcactgagacgcatcttgaacaatcctattctgttccctgcagggacgcatatgaaaccatgagggcatcctatagtgacaaaggagggtcaaggcattccaaaaccgaatcattctccacagaacaactggacgcttcttttcttgaataccaagaggattcagcacttttcacatttcgcttgaaatcattaaagcaagggcaattccagagcctgttaacacaggctgctcgccatcatgctgctcaggtaactcaatgaaactgttaactatttccctgagatttgagtgccacataacctaactgtatatatattcagttaagttttttcaggaaaggactcaaatgtctcgaagcacttgaacctcgtgtcaaagcaatatctgagaaacatcacattgactataacttcagcggtctagaggatgatggttctgacaatgatggctacagtacttacgattcttgtagtgatgacggagaactgagtttcgactatgaaataaacgatagagaccaagattttcttacttcgagaggttcaatggatgtaagttccatttatatttggttactgtcttttaatttgtttgtgtgccttacagcagaggccatggatgtaaaacatttccattaaataataaaaaaagcccttttaatgctgctgcctctcatctagtgcttctacttaaccacctcatacatatatagcctagtttcagctttttcctcttaattggttttacaatatatggatcttataaatcagcatcaatggtagcatttgaactggcataagcttcaactctttatgctttctttgtctaatcagctcactaaggttctatagtttgcactgattatctctggaatttgctcactttattttctgttcatttttattcataaaattctactgagaatactgatgatctgtcttttatatttttatctaatttatgttcttttattttgtgtccagtttgataaaagtgatcagactacttcaccaaagccaatcaaagaaaacaagcaggtgtgctgccactccataatactcatattagaagtgttctaactgggtcgactaatatgatttcgttagttagttatttctcttatccaaatttcactacgttttattttgatgcactcactgagtttggaaaaactattatttttcaatgtggtggttgatatgagtgtttacacccaaatctatcactactcaaagagcaattattcaagcgaaaaaaatatatatgtatgatgcaccttcaccagcctctacccctctatctccagttttgtaccaagttaacaaaatgctagtacatatatttatattctgaaattctgattggtatctcataataagcaggaagaggcaaaacaagcagaggccgaaatagtgttcccgcaattgaagcccgagttcgctacacattcagctccactttttgctggcaatttgcttgatgaaactgacaggcttcggcaaatgaggccatcctcaaccaaacactcgtacaggctccctaccccagttggtgctgacaaccccgtaccatcaggttcacacaggctgcatcattccgcgcaattcttcgaaacaaagccccatgccccgacgaatctgtggcactcgtctcctctgacaaaagactacaatggcgccatgcacaacgccgctaccaagccgtcgtcatcatcaagcaccgatgatctgaagaagctgaagagggagtcatggtcaggtccgatcccgatcaaggccgggtcaggcggcaagcccttctctcaggctgaccacaggccatcgcccaccatggcttaccctggtgcaatgcctgcggccaagccgcacgtccggcacgcgtcgtcgtcgtctgtgtcacccaaggtttccccaaagatgtcaccggtgccaccagcatcgtcgctgaagatcagcgagctccacctgctgccgctgcctccagccaatgtggatcctgtccggccttctggtctggtcggctactccggccctctggtgtcgaagcgcgcgccgacgccggcccgtgcctccccgaaggcgtcaagaacggcgtcgccgctgcctaggccgcctgcggccttggcaaggagctactccataccttccaacagccagaggacgcccatcatcactgtgaataagctcttggaggctaagcatagcagggagggcagtgatgcttcttccccaccactgactccattgtcattgtctgatttgtgccaccaggagaaggcagggaaggcagctgcaggcaacacaaggagaaagggtaagtgactagcaactcatgatgccttttttttgttttccttttgcaaaattgtattgcttgaatagttgaattgcttcgtcacacaggatttttttttgtttttatacatatttcctcgatattagagtttagacaaaagcctgtatcttcaattcttcattgagttttatgaaggacatggacatttagcactgacattagtttgcatgggcttctctttgtttgtcatcagctatccttctggtttatgaactagtattagcgatgcacctttgttcttttccctgaaaataaacatgtaacagattgacgtgcagaaaatagaataatatattgaaactggagaattgcatcaccttgtactactaaatgagaaatggtaccataatcttttggtacttttatttgtttcccaatgtgctaagaaaggagatttaggctgctttatatacatattgaaatattataatttagtttctgtagtttcatgtgtttctgcatgccatcaagaattccgacattttcaatgttatgtgcagtccttggcaagtatatatatatgctatagttgtcacagatcttgtagattttcagtcttgtttttgttagttctttctcagaagattttgtgaaccatctaaccatcgtttttctgttcgttgcagaaaccttgtgatacacccgtcaaattcgaaccattgctggacaattttgtttgtaagttagtggtgtattgtaggtttttgtgttcataatattctttcgttttgccacctgccttgtaaataaaaagaaataaaggtggcaaagcaatgtaagtatgtaacacattctttaacgctttttttttttttttggtttagctatctacactagttcttttggttcagaaaatctgagttagcaagggcatgaacagtggttttacaacaggttgtgctagttatctgaaataacagatatgtatcattgatgattcgattctatagattttacctagaatggtatac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0515200, RefSeq:Os02g0515200