Os02g0517600

From RiceWiki
Revision as of 02:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0517600| Description = Conserved hypothetical protein| Version = NM_001186060.1 GI:297721252 GeneID:9268497| Length = 6146 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0517600

Description

Conserved hypothetical protein

Version

NM_001186060.1 GI:297721252 GeneID:9268497

Length

6146 bp

Definition

Oryza sativa Japonica Group Os02g0517600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19654728..19660873

Sequence Coding Region

19654728..19654805,19654975..19655209,19655283..19655518,19655624..19655727,19655807..19655856
,19655963..19656033,19656571..19656690,19656778..19656948,19660361..19660453
,19660541..19660873

Expression

GEO Profiles:Os02g0517600

Genome Context

<gbrowseImage1> name=NC_008395:19654728..19660873 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:19654728..19660873 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccacgtccggcccagcaaaagaccaggaggggccggtccatgggcctcaggagtccacttccagcgccgccgccgccgccgccgccgatgcttcgatccccgcgccacccgagggcgccggcgatgtctctccgccgtcaccgccgccgccgccccctccctcgtccgtccagagccgcgcccatgaacgggcacgtgagcagcccggagatggaggccgcggcgccgatagatcgagctccgccgctgcggcggtcgaccggaaggggaagaagaagatcggcgaagattcttcttctccggcaccacctgatgatcgggaacaggcgccaaggaaagaggggaggaagaagtccgattccccgatgaagtttctcaggagtagcattcttgcgattcatggctacgccaagaaaaagaaagttcctattgacaaagccttcattcattatttcgggaacatacataatgctctccagcatggatatgttcctttgcatttggcgcatcttgacactcgttattcagaattaagacctgtacgtagagatggggagggtttctataggagcttcatgttttcctacctggagcaagttgctgatagggtagacacacgtgaggaagatcgccttcttgatgctgttagaaaattggctacccgggctgaacatcttcaatgggcctctgaattttcccggagatgcgaagcatttgagacgctgatagagaaaataaagaaattgaagtgcatgtcggagcagccaacatccgcaatcaggggagaacttctcctcgagctcttcagcagttatgatacaacagatgacatttttgctttcctcaggttagcagcagctatctggatatgcacgcacaaagggttgtatggacagcgtgtaacggggcttggagaaggtgtcagtctggaagattggtgctcgacgcaggttattcctccccgtgtgcacgcggaccacgttacgatgagcgccctgtcgcgcgcactcggggtggccgtccgagtggaggacacgcttgatggacgcaagaaagatctcatggctgccgaactccagtcgatcacccgagcgtcgaacccgcggtttagggggatcgaagatatgtactgcgttgcccgtggaactccccgagtgaccctggttcgcatcctgagcgacaacaacaaggaggaggaggaaggagccagcatcctcctcctcctgcagttcagacttcaagtagaagggctggccagggagatgcagatcgtgccgagagttcaagtcaaggggcagcgagtgcgagctggttccaccgctgcagacgtggtggttccaaggagaagcagtcttgagctgatggagcttgttgtagtaatagcagctgctgcagctaggtttgatagttttcatgaagtgctatttttacctcccggcttaattgtgcctgatgagcttacaagttgcattccatctggctga</cdnaseq>

Protein Sequence

<aaseq>MASTSGPAKDQEGPVHGPQESTSSAAAAAAADASIPAPPEGAGD VSPPSPPPPPPPSSVQSRAHERAREQPGDGGRGADRSSSAAAAVDRKGKKKIGEDSSS PAPPDDREQAPRKEGRKKSDSPMKFLRSSILAIHGYAKKKKVPIDKAFIHYFGNIHNA LQHGYVPLHLAHLDTRYSELRPVRRDGEGFYRSFMFSYLEQVADRVDTREEDRLLDAV RKLATRAEHLQWASEFSRRCEAFETLIEKIKKLKCMSEQPTSAIRGELLLELFSSYDT TDDIFAFLRLAAAIWICTHKGLYGQRVTGLGEGVSLEDWCSTQVIPPRVHADHVTMSA LSRALGVAVRVEDTLDGRKKDLMAAELQSITRASNPRFRGIEDMYCVARGTPRVTLVR ILSDNNKEEEEGASILLLLQFRLQVEGLAREMQIVPRVQVKGQRVRAGSTAADVVVPR RSSLELMELVVVIAAAAARFDSFHEVLFLPPGLIVPDELTSCIPSG</aaseq>

Gene Sequence

<dnaseqindica>6069..6146#5665..5899#5356..5591#5147..5250#5018..5067#4841..4911#4184..4303#3926..4096#421..513#1..333#atggcgtccacgtccggcccagcaaaagaccaggaggggccggtccatgggcctcaggagtccacttccagcgccgccgccgccgccgccgccgatgcttcgatccccgcgccacccgagggcgccggcgatgtctctccgccgtcaccgccgccgccgccccctccctcgtccgtccagagccgcgcccatgaacgggcacgtgagcagcccggagatggaggccgcggcgccgatagatcgagctccgccgctgcggcggtcgaccggaaggggaagaagaagatcggcgaagattcttcttctccggcaccacctgatgatcgggaacaggtgccgcattgttcttttgtttgtgccgtcatctcgcttgcgtctgttttttttttttctcttgagcatttcttggtttccctgaaggcgccaaggaaagaggggaggaagaagtccgattccccgatgaagtttctcaggagtagcattcttgcgattcatggctacgccaagaaaaaggtaaggagaagctttcttgacattcttgcgccatcatttgtgctggggacgtcggattcttggatcatgtctcgctcctgtgaaatcttgggatcatcctgcgtaggtcttggggtgcggttcttgtgtcagcttgtgtgttggaatgtggaactaggatctttgcattcttgatttctatttatcgatgtgaagatcttggtcgattttctgtcgtattctagcgaaaatgtctttggttaaaatgatgtggcatcctagaatagagtcgaaatcaatcagtaaatgttagtgagcaattcggctttctgtatggagagtaaactcttcctaattactagaaggtcttctttctatcatctgtggaactttgatacagggaacggcctccttgttttccgtcgaaatttttgagacataaatgtttctgcttgcgataattaaattttctgtttaatgtgatacattttgatcggactataaaaatgtggcggatttatcggtgatgtcatgcttaccatgatattttggtaagaagcccaatgtaagagcttttattgggaaaatgcttcaatccggtcgtccgatcttgagaaaaaaatcggacacctcttactatgattttgctatatgcagcctttgtcagatcctctctctgttacgtatgcttcctttctgggtattaatatacatgaaagagagatggcacgaggttactggtatgtacataacacacttttagcaaacttgaaaaaatgatttttcttctaaattactcatccaatctacgatccgattacaccattgtattcgttacaattaaatctttacaacaagatctcacatgactatattataataaaaaaacacacatatgtttcaaccaattaaacttaatgtttcacatatgaaaattagatgtttcagctgaaattctattatgttgcacatatttatttagtgtcccgatgtatatatctttctttaatgtatctcatggtgctatttgtatgtttcagtaagtagtttattgtgtttcactggtttatttgtaaatgttgcatatatgttggttgagtgtttcaataagtatccactagtgtacttacaatattacactaaaaatgtttcacttagtgtactcacaatgtttatgtatagatctaatgttgcagtgaactgaaaaattcttttgcaacaaatcacccacatattatgaaaatcatctaataagagaattcgttttattttttgttccaccaaaaatgtttcactttatatagatcaaatgttgcagtgacttgaaacattctttcgctatttgctgaaacatttttttatataaggtgaaataacgtccgatttaaacgattgaaacatttttgatctacctagtgaaacaattccgatatacttggtggaacaacgtgcaacatttaaaaataattcaataataagctaaaaaagttttcaccggaatatatccatgtgtggtcttgttttaaagatttaattgcaatgaatttaatggtgcaatcggatcatgatttggataaataatttaagagaaaaaatagtttaaaatatttttgcatgcatgcatgcttgatgatgtttgatggctgatgatgtgcgcacgcggatcgaactgctgatggatacgtccgatttttcgtcttgcatcgtacgtctgatgcgtagcgctctctcttttattgccatcgaatgattcatccagatgtgtattcggaaattgggattgcatcacgtggctcggtttctctaaatcacagttcacttgcatgcaaaaacacttcgcacgttctactgttcggtctaaaatagtcaacctttggctggttgctacccgaaattggctacaaaggctgagtagataaacagcggaagcaccagttttgtgatcttgctaatcagttttggaaagttccataaacccccaatttccttgtttccaagtgtaaattgtttaatcttgaatctcactttcatggattgggtttaagtttgataatatttactattaatttttacatgttttttacattccctaaaaattttaacatgttttgttgtggaataacttttggatataaaaggaaggtgaacgtgttgtccaattgaaattctgcaaatagaatgtagtcacaattgtcacttcatgcgtatcaccagatttgactcttttttgtctttgataatgttggaaatgggcgaataaattatgaaatgtcggaattagaaattcagaatcctataccacatgatgtcgtgtatattcacaagttcctttactgtaaaaatatgatgaaattttgggccatattatgactactatggtattttcgtaagaaatcctgaagccagatgtatgagttttttcgtatatgcaaacttgctgagcgtactctaatgtttggtctaaaagattcagcggctgagttgctgcctagaattgtcccagaagacttgcatgattgccaagagttggcaaaattattgaagcactaattttctagtcctactagtatgttatttaatagttccatatattccatttttttttagaatatcatttacttcctccgtttcacaatgtaagtcattctaacattttctacattcatattgatgttaatgaatctagcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtatctcgtattccttattcaacattgtatcctagcctaaaatgtttttatcttcatattaattctccgaagttgctgccaagtctggtaagacatgattttaacctgttctcttgtaaatagctttcagatagaaaaggaaaacaaccaaactaccccaaccaaacttctaaggaaataatttcgaaatcgccgcctcatgtgggtcacaaggttcgactccttttaagttttaacctttgaaatgttgaatatggaagtgtatgaattacgaaatgtcaggatcatagatcatctcaggatactgtgcatattcacaactcacaagttcttgtacagctaattgttcagcagaatctctcttcttgtatgcatgctaactcataagttaattctggattgtagttatgctttacatgccatctagaggattggattgtgatgacctatggaactgtaatctttgctgaaattaggaaatcttgtttatctatccttccttttatgactaaacaacagccaaccaataaaattaagcgattatttcatttaatgctttcaagcattttccagaatgtacagaaccgaaaatctggagcataacacataagttacatttctttagttatattgttttctggttcagatcattgttttttgattcccttatttgtgtgtgaggtgcagaaagttcctattgacaaagccttcattcattatttcgggaacatacataatgctctccagcatggatatgttcctttgcatttggcgcatcttgacactcgttattcagaattaagacctgtacgtagagatggggagggtttctataggagcttcatgttttcctacctggtaagtgttctcctccctgttccctactccctagcataggatgtgttcaatgttgtaactctctttgcttatgacaatgtatgacaggagcaagttgctgatagggtagacacacgtgaggaagatcgccttcttgatgctgttagaaaattggctacccgggctgaacatcttcaatgggcctctgaattttcccggagatgcgaagtaacctctcaccttccctatattcgtgtaatggaccattcccttgaatttgtagtgtacaaaccaagctggatcgattgtcttactctctttgttttatcatttgcaggagatgcaccattgtttcacaatagtggcacgacatcgtagtcaacaccttgttgatattagttataattataagtttttgaaagtatagttacctgatggtaacaaatattcaacctttcaagtttgcagttggacaatactataatgaagacaaacataactatctgtttcttacattgaagactgaactgttgcacacatactccttcatggtgtgtgcacctgatcctaagtcagaaatgccttcctcacttgttgttttaactatggaagcttctcagacgtgttatgctagtcatgtttgttcatatccgattattgatgatcagcattctgtaagcaccattgtaacatgctagttaaactctttgggtgatagatgccatctgtatgttaatgatttttttgtatcattgattcttgcaggcatttgagacgctgatagagaaaataaagaaattgaagtgcatgtcggagcagccaacatccgcaatcaggtttttgaaatgtttggttttctgaaattcctgcataaggcttgtttctaaatacatcccatcccatctgaatgactgaacatgcacctttcttctgctacgacaggggagaacttctcctcgagctcttcagcagttatgatacaacagatgacagtgagagaaacaccttgagcctgcgttccttcagtctcatcctaattcatgattctgacatgcattcctgctgtatcagtttttgctttcctcaggttagcagcagctatctggatatgcacgcacaaagggttgtatggacagcgtgtaacggggcttggagaaggtgtcagtctggaagatgttagtatctgttttgaaactggcaatgcaagtatatatatatgcaactattcttggcactcgcttcttgacctgactgatttcttgctctggatgcatatgcagtggtgctcgacgcaggttattcctccccgtgtgcacgcggaccacgttacgatgagcgccctgtcgcgcgcactcggggtggccgtccgagtggaggacacgcttgatggacgcaagaaagatctcatggctgccgaactccagtcgatcacccgagcgtcgaacccgcggtttagggggatcgaagatatgtactgcgttgcccgtggaactccccgagtgaccctggttcgcatgtactctcactaagacatcctctacccagtgcctcctggtgctactactagcattggtccgaatctgctacagcctgagcgacaacaacaaggaggaggaggaaggagccagcatcctcctcctcctgcagttcagacttcaagtagaagggctggccagggagatgcagatcgtgccgagagttcaagtcaaggggcagcgagtgcgagctggttccaccgctgcagacgtggtggttccaaggagaagcagtcttgagctgatggagcttgttgtagtaatagcagctgctgcagctaggtttgatgtgaagaatatgtaggtcatcataatctgttgtcttgtgaggagagggaacatttacattgatccatcctgagctccttattctttgtcatggcttgatatgtagataaaagtgatcaaatgagtccctgtttactgagttttcatttctggtcaattgccctgtgcagagttttcatgaagtgctatttttacctcccggcttaattgtgcctgatgagcttacaagttgcattccatctggctga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0517600, RefSeq:Os02g0517600