Os02g0518000

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Revision as of 02:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0518000| Description = C2 calcium/lipid-binding region, CaLB domain containing protein| Version = NM_001053498.1 GI:115446366 GeneID:4329483...")
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Gene Name

Os02g0518000

Description

C2 calcium/lipid-binding region, CaLB domain containing protein

Version

NM_001053498.1 GI:115446366 GeneID:4329483

Length

1511 bp

Definition

Oryza sativa Japonica Group Os02g0518000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19682425..19683935

Sequence Coding Region

19682823..19683854

Expression

GEO Profiles:Os02g0518000

Genome Context

<gbrowseImage1> name=NC_008395:19682425..19683935 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:19682425..19683935 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcatcggtggtggccgcggcggcggccggagccggcggccatcgacatcacgtgggtctcgtgcaggggcgtcaggtcgtccgtccccttccacacgccctgcctctacgcctccatctacctgcaccacccgtcgccgtcgccttcgtcgtgcgggcgccgccgcccgcaccgcgtcaagaccgccacggaccgcgccggcggcgggaacccggagtgggacgcgccgctgcggctctacctcccctcctcctcctcgtcgtcgccggcgacgtcgagcgacaacaaggacgaggttctcttgcggttcgagctcaagtcggaggtggccgtgctcggggacgtgctgtccgcgaccgccgccgtgccggtgtccgagctcgtggcggacggcgcgacgcggcgcgtgtcgtaccagctcgccgggcccgacgggaagcaccccaacggcgtcatctccttctcctacgccgtccacgccgccgccgccgccgacacgtcgtcgtcatcacccagcagcgacgccgacgacgaccggaggagcaccaccaccaccaccaccagcggcagcgagtgcgacgaatactccatcactccacctcgctcagccgcatccagagcgatcactctccctccgccgccgccgtcgtcgacgatgtacccggcaatagactggccgccgactgagcaactcatccccatgctactctacccgccggcgaagcctcatactacggccattgtcaagggctcgacgtgctaccctcctccgccaccgccgtcgtcgactcctccggtggagcccgtcgcggtattcccgccgccgccgtcgccggcgtgcggcgtgtactacccgccaccgacagtgagggagccggtcatcaacagaagcgggatgtacccgaaggtagaccttgatattccggtgagttgctacccgccgccgccgacggcggcgacgatgtacggcgggggatgcgggtacgcggcggcgccggagtgggacggccggtggttgcacggttga</cdnaseq>

Protein Sequence

<aaseq>MDHRWWPRRRPEPAAIDITWVSCRGVRSSVPFHTPCLYASIYLH HPSPSPSSCGRRRPHRVKTATDRAGGGNPEWDAPLRLYLPSSSSSSPATSSDNKDEVL LRFELKSEVAVLGDVLSATAAVPVSELVADGATRRVSYQLAGPDGKHPNGVISFSYAV HAAAAADTSSSSPSSDADDDRRSTTTTTTSGSECDEYSITPPRSAASRAITLPPPPPS STMYPAIDWPPTEQLIPMLLYPPAKPHTTAIVKGSTCYPPPPPPSSTPPVEPVAVFPP PPSPACGVYYPPPTVREPVINRSGMYPKVDLDIPVSCYPPPPTAATMYGGGCGYAAAP EWDGRWLHG</aaseq>

Gene Sequence

<dnaseqindica>82..1113#tcgttctcccctcttctgctccgtacgtacgtgttgggtgcgcgcgcgttgtactggaggagctgaggaagcgattgatcgatggatcatcggtggtggccgcggcggcggccggagccggcggccatcgacatcacgtgggtctcgtgcaggggcgtcaggtcgtccgtccccttccacacgccctgcctctacgcctccatctacctgcaccacccgtcgccgtcgccttcgtcgtgcgggcgccgccgcccgcaccgcgtcaagaccgccacggaccgcgccggcggcgggaacccggagtgggacgcgccgctgcggctctacctcccctcctcctcctcgtcgtcgccggcgacgtcgagcgacaacaaggacgaggttctcttgcggttcgagctcaagtcggaggtggccgtgctcggggacgtgctgtccgcgaccgccgccgtgccggtgtccgagctcgtggcggacggcgcgacgcggcgcgtgtcgtaccagctcgccgggcccgacgggaagcaccccaacggcgtcatctccttctcctacgccgtccacgccgccgccgccgccgacacgtcgtcgtcatcacccagcagcgacgccgacgacgaccggaggagcaccaccaccaccaccaccagcggcagcgagtgcgacgaatactccatcactccacctcgctcagccgcatccagagcgatcactctccctccgccgccgccgtcgtcgacgatgtacccggcaatagactggccgccgactgagcaactcatccccatgctactctacccgccggcgaagcctcatactacggccattgtcaagggctcgacgtgctaccctcctccgccaccgccgtcgtcgactcctccggtggagcccgtcgcggtattcccgccgccgccgtcgccggcgtgcggcgtgtactacccgccaccgacagtgagggagccggtcatcaacagaagcgggatgtacccgaaggtagaccttgatattccggtgagttgctacccgccgccgccgacggcggcgacgatgtacggcgggggatgcgggtacgcggcggcgccggagtgggacggccggtggttgcacggttgaatatatagcacgtgcgtcatcgtcgttgctgcgcgcgggttcgatcgtttcttcatttgtgccgcgcgccctctgcctcgtttttttaaattatttttgtgttttaaatttgtttgtttgcttaaaggtgtgtgttcacgctaaaattagaagtttgattgaaattgaaacaatgtgacggaaaagttggaagtttgtgtgtgtaggaaagtttaatgtgatgaaaaagttaaaagtttgaagaaaaaattgggaactaaaccagacctaagtttaagttttgggcataggcggagaatgtgggcggcctgtagttcttctttgctgcttcaatatacccttcctactgtattttgtaattttttgagaaaatatactgtgctactcgttggagttct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0518000, RefSeq:Os02g0518000