Os02g0519100

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Revision as of 02:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0519100| Description = Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2| Version = NM_001053503.1 GI:115446376 GeneID:4329489| ...")
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Gene Name

Os02g0519100

Description

Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2

Version

NM_001053503.1 GI:115446376 GeneID:4329489

Length

6213 bp

Definition

Oryza sativa Japonica Group Os02g0519100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19730149..19736361

Sequence Coding Region

19730385..19731559,19731677..19731791,19731893..19731945,19732021..19732281,19734919..19734969
,19735097..19735345,19735514..19735736,19735839..19735955

Expression

GEO Profiles:Os02g0519100

Genome Context

<gbrowseImage1> name=NC_008395:19730149..19736361 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:19730149..19736361 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctgtccaggaggacgatgacgcggccgggccggaggtggacaggctccggcgccacgactcgttctacggcgacgcagagaaggtctccaacgacaagagccatggcaccggggagaactgggcgcggacgctgcagctggcgttccagagcatcggcgtggtgtacggtgacgtcgggacgtcgccgctgtacgtctactccagcacgttcccggacggcgtcaagcacccggacgacctcgtcggcgtcctctccctcatgctctacaccctcatcctcatccccatggtcaagtacgtcttcatcgtcctctacgccaacgacaacggcgacggtggaacatttgcgctctactcgctgatatcgcggcacgcgaagatcaggatgatcccgaacgatcagacggaggacgccaacgtgtcgaattacagcatcgaggcgccgagctcgcagctgaggagggcagagtgggtgaagcagaagctggagtccagcaacgcagccaagatcgcactgttcacaatcacgatccttggcacctccatggtcatgggtgatgggacactgacgccagcgatttctgtgctgtctgcagtgagtgggatcagggagaaagccccaagcctgacacaattgcaagtggtgtggatctcggtacccatcctgatcgtgctgttctcggtgcagcggttcgggaccgacaaggtgggctactccttcgcgccggtcatctcggtgtggttcgtcctcatcgccggcatcggggcgtacaacctcgcggtgcacgagatcaccatcctccgggccttcaaccccatgtacatcatcgattacttcaggaggaacggcaaggaggcctgggtctcccttgggggcgctgtcctctgcatcacaggcacggaggccatgtttgctgaccttggccatttcaacatcagggcaatccagctgagcttcacctgcgtcctcttcccctcggtcgcgctatgctacatgggtcaagctgcctacctgcgcaaatttccggaagatgttggcgacaccttctacaaatccctcccagcgccgctgttctggccggtgttcgtggtggcgatcatggcggcgatcatcgcgagccaggcgatgctgtcgggggcgttcgccatcctgtccaaggcgctgccgctgggttgcttcccgcgggttgaggtggtgcacacgtcgaacaagtacgaggggcaggtgtacatcccggaggtgaacttcctcatcggcgtcgccagcgtcgccatcacggtggcgttccagaccacggcgaacatcggcaacgcctacggcatctgcgtcgtcatggtgttctccatcaccacccacctcatgacggtggtgatgctgctcatctggaaggtgcggctgccgttcatcgccgcgttctacgtcgtgttcaccttcactgagttcctctacctctcgtcgatcctctccaagtttgccgagggcgggtacctccccttctgcttctcgctggtgctcatggcgctcatggcgacgtggcactacgtccacgtgaagcggtactggtacgagctggaccacatcgtgccgcccgacgagatggcggcgctgctggcgcggcgcgacgtgcggcgcgtccccggcgtcggcctgctctacacggagctcgtccaggggatcccgccggtgttcccgcggctcgtggacaagatcccctccgtgcacgccgtcttcgtgttcatgtccatcaagcacctccccatcccgcgggtggctcccgcggagcgcttcatcttccagcgggtcggccccgacgccggccaccgcatcttccgctgcgtggcgcgctacggctacaccgacccgctcgagggcgccaaggagttcgccgccttcctcctcgaccgcctcaaggtgttcgtctacgaggaggccgtcttcgcctgccaatgcgcggaggacggcggcggcggcggcggtggcgatgacgacggcgtgctgaggagggcggaggagatggcggcggaggagaagcggttgatcgacgcggaggcggagcgagggttggtgtacctgatgggggaggcgaacgtggaggcggcgccggggtcgtcgttgatgaagcagatcgtcgtcaactacgtctacactcgcttgaggaaaaaccttagggaggaacacaaggcgctgtccattcctaaggaccagctgctcaaggttgggatcacttatgagatttag</cdnaseq>

Protein Sequence

<aaseq>MSVQEDDDAAGPEVDRLRRHDSFYGDAEKVSNDKSHGTGENWAR TLQLAFQSIGVVYGDVGTSPLYVYSSTFPDGVKHPDDLVGVLSLMLYTLILIPMVKYV FIVLYANDNGDGGTFALYSLISRHAKIRMIPNDQTEDANVSNYSIEAPSSQLRRAEWV KQKLESSNAAKIALFTITILGTSMVMGDGTLTPAISVLSAVSGIREKAPSLTQLQVVW ISVPILIVLFSVQRFGTDKVGYSFAPVISVWFVLIAGIGAYNLAVHEITILRAFNPMY IIDYFRRNGKEAWVSLGGAVLCITGTEAMFADLGHFNIRAIQLSFTCVLFPSVALCYM GQAAYLRKFPEDVGDTFYKSLPAPLFWPVFVVAIMAAIIASQAMLSGAFAILSKALPL GCFPRVEVVHTSNKYEGQVYIPEVNFLIGVASVAITVAFQTTANIGNAYGICVVMVFS ITTHLMTVVMLLIWKVRLPFIAAFYVVFTFTEFLYLSSILSKFAEGGYLPFCFSLVLM ALMATWHYVHVKRYWYELDHIVPPDEMAALLARRDVRRVPGVGLLYTELVQGIPPVFP RLVDKIPSVHAVFVFMSIKHLPIPRVAPAERFIFQRVGPDAGHRIFRCVARYGYTDPL EGAKEFAAFLLDRLKVFVYEEAVFACQCAEDGGGGGGGDDDGVLRRAEEMAAEEKRLI DAEAERGLVYLMGEANVEAAPGSSLMKQIVVNYVYTRLRKNLREEHKALSIPKDQLLK VGITYEI</aaseq>

Gene Sequence

<dnaseqindica>4803..5977#4571..4685#4417..4469#4081..4341#1393..1443#1017..1265#626..848#407..523#atttctacataggatttgatgtcctaagatatcctgttctccaataggttagctggttaggtaagacagtactccctctaataaaattagtggcaccacgtggaaaattaccaaacttttctcctctctctctctctcccctatatgacaggtggggcccaccttccggctcctcttttcttcttcctctataccacctcttgacggtcgagcacctcgtcaggacgcaacgagacggctttggcgccggcgcggtggatggcggcaaggtggctggacgagggtgcggcacgatcccggtgaccggcggcagtggcacgagtcgagccgacggcggaagatcgaagctcgtcggtcgtgacggaccggcggtgacgtgaatcgatcagccgacgacacggggacgatgtctgtccaggaggacgatgacgcggccgggccggaggtggacaggctccggcgccacgactcgttctacggcgacgcagagaaggtctccaacgacaagagccatggcaccggggtcagcctctcagctctcgccatcgccgtctctctcgtctcgtagcctgcaaggcacagcgacactgatgcctgtgtgtgttggtgtggcgcgcgcatgcaggagaactgggcgcggacgctgcagctggcgttccagagcatcggcgtggtgtacggtgacgtcgggacgtcgccgctgtacgtctactccagcacgttcccggacggcgtcaagcacccggacgacctcgtcggcgtcctctccctcatgctctacaccctcatcctcatccccatggtcaagtacgtcttcatcgtcctctacgccaacgacaacggcgacggtgagctcggatcagctccgatcatccacacgtccgtccatccgtccaatccaacctgttcaaattcaatgatctcgatcgatgcagcaaccatgcatcaccattgttctcaataatctctcttgtacatgttcttggtgcattacatgaacttgcgtactgctgcaggtggaacatttgcgctctactcgctgatatcgcggcacgcgaagatcaggatgatcccgaacgatcagacggaggacgccaacgtgtcgaattacagcatcgaggcgccgagctcgcagctgaggagggcagagtgggtgaagcagaagctggagtccagcaacgcagccaagatcgcactgttcacaatcacgatccttggcacctccatggtcatgggtgatgggacactgacgccagcgatttctggtaacgatcgatcgatcagtttttgtttcctgcacatggataatatgtgtcaaactgtcaatatgtgtatatagatttggagaacagtagagtactgatctgttgtgaatggatgttctctttgcagtgctgtctgcagtgagtgggatcagggagaaagccccaagcctgacacaatgtgagcacaccaaagcacttcttaattagtttcagttttaacatgccacatgtatcaacttaataaaggtattaatagtagggaaaaaaacaccaggtttgttctcatggtctacaaattcctatatctctactattataaaaattaaagatgtttttgctggtgctttgatacattatctatgtatgaatcggtttttaagttcgttcgcttttgaaaatatatatttgtattttgagtcggttcttaaatttgttcactttgggaaatacaaaatgagtcatataagaaatctctttaaaaaaaactcgcatgctaacttgagacgatcggactcctaactgcagctcatgattttctatatatatatatatatatatatatatatatatatatatatatatatacatatatatatatatatacatatatacatatatatatatatatatatatatatatatatatatacatatatatatatctccaaacgaattccaatgatgttcaccttaactaaccatataataataagattaaaatagccttcactcgttgcagcgcatgggccttttttctagttaataaaaaatccaagtaggtatacaattttaaatataaaaaatttggaataaagaataaaaatatgaaaaaaagaatccatgtacaaatacaattgagggaaatccaaaatttggaataaaattgaaaaataattaatattaagataagagtccatgaagaaatacaatttagggagattacaaaattcagattaaaaattaaaatataattagtactgagagtgagagaagagtccatgtagaaatgcaatttagaaacatctaaaattaagattataaataaataatattaagatagtccactcataagtaaaatttagaaatacctaaatttagattaaaaacataaatattatggacaaaagagttcttgcaggaattcaatttattaatattttcaatttagattaaaataaataattttaagagagagggttcatgtagaaatttgaaatatttggttaaaataaaaattactgtgagagtatttcatgtatgagtaaaatttagaaataatcaatttatagatgaaaaataaatatattgagagaaaagtgcatgcctttgcttatcttgatttgaggcttttctagggtcctatgaggtgaacatagttagaaatatattatttaaaacatgttataaacagtcataaatatacgatataatattgctatctttataaggtggaagaagattattagagatactaagaagatgccactaataatctagaggtgaataaatgtagggaagaagataatagagataataagaagatgccactaaaagtctaaagatatagatagagggaagataaactaatactccctccgtcccaaaaaaaaaggcaaactctgggtttccgtgtccaactttgactgtccgtcttatatgaattttttttataatttgtattttcattgttgttagatgataaaacatgattaatattttatgcctgacttgtctttttaattttttttcataattttttcaaataagacggacggtcaaacattggacacggaaaccagggtttgtctttttttgggacggagggagtataccataaagtttatatacttttgatttgttacattattaacagaatgctaaagaatccatcatatttgctttatgagtatatgaattactattaatcataatataagatattggttagttagttcagccatagtttaaggcctcgtttgttttggctccaaattcccactccagtgggagctggctcccgtgggagttggagaccagctgagaagtgtttggctagctttcagctccagatctaaaattgaacaaaatggaaaaaaatgcaatccccaactcatgaagccctaggtcgacgtctcgacatacgccacccatcgccggtcgcgtgtagtccttgcgtgcgccatccgcgcgccgcccaccacccgctaccctcacgccatccccgcacgcgccgcctgtggccggccgcgtgctgcccgccgctggctatgcgtcacccacgcgcctccaagccaccgcccgccgcgcaccggccacgcgccatcccgtcggagtgccgccattgaccccgccgccaaccgcgcctgcccatgggagaggtaaaggttgagagagagagagagagagagagaagagagagagagagagggggtgatgaggtgagtttgggtagttaagtggtatttttttgtaaatatattaaaaaaattaaagggtagtgggtcttttgagttgaagtggagcagtggagcagcaaaaatccagctccaacgccgtagttcattttttagggtagctctgctaactccactccctaaaatagaggatttggacagtttggcatagctctagctccaagtaagttggagctgggagctagatctgcgtcaaacggggcctaaatgacatatcaatattttttacaataaaatatgctagtcgcacaaactactggccaccagagaagtcgtcactgcatgtcaagcttgttctcaatagcgtctgaattatttttgcattgtcgtttttgctacagtgcaagtggtgtggatctcggtacccatcctgatcgtgctgttctcggtgcagcggttcgggaccgacaaggtgggctactccttcgcgccggtcatctcggtgtggttcgtcctcatcgccggcatcggggcgtacaacctcgcggtgcacgagatcaccatcctccgggccttcaaccccatgtacatcatcgattacttcaggaggaacggcaaggaggcctgggtctcccttgggggcgctgtcctctgcatcacaggtgacctcactttgacatagctagacacctcttgttactaaaccaagctaaggccatgtttgtgcaatgtggcaggcacggaggccatgtttgctgaccttggccatttcaacatcagggcaatccaggtagtatgccagcttaatgagatcccaatctcttcatttggtcagtcatcacgactgaaattcttgcattgttcattgcgttagttccttctgaattgcagctgagcttcacctgcgtcctcttcccctcggtcgcgctatgctacatgggtcaagctgcctacctgcgcaaatttccggaagatgttggcgacaccttctacaaatccctcccaggtacagtaggtatcctttggtcccttggaattgaacttctttttcttttgttacatttcacttggaaatgcgtgtgaattggtgggtgggtggtctgatctgaaatgttatgtgcagcgccgctgttctggccggtgttcgtggtggcgatcatggcggcgatcatcgcgagccaggcgatgctgtcgggggcgttcgccatcctgtccaaggcgctgccgctgggttgcttcccgcgggttgaggtggtgcacacgtcgaacaagtacgaggggcaggtgtacatcccggaggtgaacttcctcatcggcgtcgccagcgtcgccatcacggtggcgttccagaccacggcgaacatcggcaacgcctacggcatctgcgtcgtcatggtgttctccatcaccacccacctcatgacggtggtgatgctgctcatctggaaggtgcggctgccgttcatcgccgcgttctacgtcgtgttcaccttcactgagttcctctacctctcgtcgatcctctccaagtttgccgagggcgggtacctccccttctgcttctcgctggtgctcatggcgctcatggcgacgtggcactacgtccacgtgaagcggtactggtacgagctggaccacatcgtgccgcccgacgagatggcggcgctgctggcgcggcgcgacgtgcggcgcgtccccggcgtcggcctgctctacacggagctcgtccaggggatcccgccggtgttcccgcggctcgtggacaagatcccctccgtgcacgccgtcttcgtgttcatgtccatcaagcacctccccatcccgcgggtggctcccgcggagcgcttcatcttccagcgggtcggccccgacgccggccaccgcatcttccgctgcgtggcgcgctacggctacaccgacccgctcgagggcgccaaggagttcgccgccttcctcctcgaccgcctcaaggtgttcgtctacgaggaggccgtcttcgcctgccaatgcgcggaggacggcggcggcggcggcggtggcgatgacgacggcgtgctgaggagggcggaggagatggcggcggaggagaagcggttgatcgacgcggaggcggagcgagggttggtgtacctgatgggggaggcgaacgtggaggcggcgccggggtcgtcgttgatgaagcagatcgtcgtcaactacgtctacactcgcttgaggaaaaaccttagggaggaacacaaggcgctgtccattcctaaggaccagctgctcaaggttgggatcacttatgagatttagggcctgtttggtatagctcttactccgagattcttatcacatagagctagacatgtaccgaacactcgtaatatcctggataatacatagagtagagctgtcggtccgctatatactaaaaattacactataaaggatgtagcatcaattctacttctactcagtagtcagttctgctccattcttggagtaggagttgtaccaaatatccctttagtcacttttttttctctctt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0519100, RefSeq:Os02g0519100