Os02g0521300

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Revision as of 02:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0521300| Description = C2 domain containing protein| Version = NM_001053511.1 GI:115446392 GeneID:4329499| Length = 7063 bp| Definition = ...")
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Gene Name

Os02g0521300

Description

C2 domain containing protein

Version

NM_001053511.1 GI:115446392 GeneID:4329499

Length

7063 bp

Definition

Oryza sativa Japonica Group Os02g0521300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19851879..19858941

Sequence Coding Region

19852501..19852595,19852687..19852783,19853028..19853141,19853227..19853391,19853637..19853774
,19853870..19853946,19854040..19854154,19854224..19854329,19854650..19854710
,19854805..19854940,19855096..19855278,19855827..19855883,19856316..19856364
,19856451..19856599,19857671..19857718,19858529..19858693

Expression

GEO Profiles:Os02g0521300

Genome Context

<gbrowseImage1> name=NC_008395:19851879..19858941 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:19851879..19858941 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaactgctgctccgacgagatgggcggcggcggcggccacgcgggccgccactccgtcggccccgcggcggccgcggctgcggcggcggcggaggccgcgtccgccgcggccgaccgcttcctccgctcccgcggcgccggcgcgtccacgcaggtcgagttatctctctctgcatcaaatttgggcgaccaagaattctttaccaagagcaatcccatggtcattgtatattctaaaagcaaagaaggagcacttgaagaacttgggcgtactgaagtaatattgaattctttgaacccatcttggaatgcaagaatcaacgtgcactaccagtttgaggttcttcaaccaattgtgtttcaggtatatgacattgatccacagtttcatgatgtcaatgaaaagatgcttaaactggaagagcaacaatttcttggggaggctgtctgtcttttgtctgaggttatcactaaacaaaacagactgttgactctaaagcttggcgtttccgaacataacctaccaaatcctagtaaatttggtgaactaaatgttcaggcagaagaaagtgctggttcaaaagcaataatggagatggtattccgctgttcagatcttgaaatcaaggaccttctctcaaaaagtgatccctttttactaatatctagaatatcagagagtggagtgcctgttccaatttgtaagacggaagtaaggaagaacgacctcaatcccaagtggaagccagtgatcttgaatctccaacagattggaagtaaggagaaccctttaatcatagagtgcttcaacttcagtagcaacggcaaacatgacctaataggcaagatagtaaaatcggtcgcagaattggaaaagatgtatcatagtcaggatggtgaaaatttctttgttcctgccagcactgctcatgatagtcacagtaaggaggtactaaagagtcaagtgtatgtggagaaatatcttgagaacaacagacagacttttctagattatatttctgctgggtgccaattgaattttatggtagccgtagacttcacagcttcaaatggaaatccacggcttccagattccttgcattatattgatcccactggtcggccaaatgcatatcagagagcaatactggaagtaggagatgtactacagtactatgacccagctaagcggtttccctcatggggctttggtgctagacctattgatggtcctgtttcccactgtttcaacctgaatggtagcacctatcaacctgaggttgagggaatacaagggattatgtcagcttatatcagtgcgcttcgtaatgtctcattggctgggcccaccctatttggtccagtagttagcactgctacggcaatagcaaaccaatcacttgccaacaaccagcagaaatactttgttctgttaatagtcacggatggtgtggtgactgatttccaagagactatcgatgcaatcataaaggcatctgattttcctttgtccattcttgttgttggagttggtggagcggacttcaaggaaatggagtttctagatccaaataaaggagagagactagaaagctcaacaggaagagtggcatcaagggatatgatacagttcgccccaatgaaggatgcccatggcagtgggatttcgacagttcagtcacttcttgctgaaataccagggcagttcatgacctacatgagaacaagagaaattcaagcaatcagttaa</cdnaseq>

Protein Sequence

<aaseq>MGNCCSDEMGGGGGHAGRHSVGPAAAAAAAAAEAASAAADRFLR SRGAGASTQVELSLSASNLGDQEFFTKSNPMVIVYSKSKEGALEELGRTEVILNSLNP SWNARINVHYQFEVLQPIVFQVYDIDPQFHDVNEKMLKLEEQQFLGEAVCLLSEVITK QNRLLTLKLGVSEHNLPNPSKFGELNVQAEESAGSKAIMEMVFRCSDLEIKDLLSKSD PFLLISRISESGVPVPICKTEVRKNDLNPKWKPVILNLQQIGSKENPLIIECFNFSSN GKHDLIGKIVKSVAELEKMYHSQDGENFFVPASTAHDSHSKEVLKSQVYVEKYLENNR QTFLDYISAGCQLNFMVAVDFTASNGNPRLPDSLHYIDPTGRPNAYQRAILEVGDVLQ YYDPAKRFPSWGFGARPIDGPVSHCFNLNGSTYQPEVEGIQGIMSAYISALRNVSLAG PTLFGPVVSTATAIANQSLANNQQKYFVLLIVTDGVVTDFQETIDAIIKASDFPLSIL VVGVGGADFKEMEFLDPNKGERLESSTGRVASRDMIQFAPMKDAHGSGISTVQSLLAE IPGQFMTYMRTREIQAIS</aaseq>

Gene Sequence

<dnaseqindica>6347..6441#6159..6255#5801..5914#5551..5715#5168..5305#4996..5072#4788..4902#4613..4718#4232..4292#4002..4137#3664..3846#3059..3115#2578..2626#2343..2491#1224..1271#249..413#ggcggaacagggacaaagccgtaaattccgccccgtttcgctgtgccgtgccgtcccttcccctcccgtgcgtctcggcctcgcctagtgtttgaggggtccaaagtctccgtgtcgtctccacgactccacttgctctcctctcgctctcgctctccctcttcctcccacctccagatcgatgcgtcggcggtagatctcgctcgcctcctccccctcctgctcgacggcgaggagagccactagccatggggaactgctgctccgacgagatgggcggcggcggcggccacgcgggccgccactccgtcggccccgcggcggccgcggctgcggcggcggcggaggccgcgtccgccgcggccgaccgcttcctccgctcccgcggcgccggcgcgtccacgcaggtcgaggtgcggaaaacccacacacaacgcacacaccgcctcacgccccatccatgcggtttaattctgcttcacaccatagcagtagtagtagtagtagcgcgccgccaggtgctcgcgagcgagcgcgcgtgggtggccgtgccattgcgccgggtgcgcttcggttgcgtgcgtcgctggcggttctccagtttcgcgccgttctgcgtgagtctcgtggtttgcgccttgcagcgacgggactagcggatgcgtgtggtctgtgcctcagctaatttactccgctacctgttctcagccttgcaaacaaacaaacaaaaaaaaaggagaaaaaacccgagggatttcgtgttgatcgggataaaaaaccattacacgacgatgattgggagcgggcgtgaaatctgagcatgccgtgtgctcttggtttgacacggcactgaacattctgatgttctgacggctgcagcagttggctgctgatgttcttctaattgataacgttgcgtaaaagatgatttactgtatttgtggtttattagtaagattttgtgcctgaacgcttgggagtctgcaagttgtgtggctaagtatttctgtcatttcatactacctgacctggtagttaatccaaaaacttcaaatatttaatactgtgatgttgcttcatgtgatgactattatgatgcatgtgcattgtataaatttatgtcttgtttggatttactgatagaaatgcaattaccgaactgatgagggtgtgtttaattgtgttttattttgacaagaactctgtataacctgttgaaacagttatctctctctgcatcaaatttgggcgaccaagaattctttaccaaggtatgctccaggttttcacttgttgcattttgttagttttgctattttcttatttcagtttataactgatcggtattctggtctgttaggtatctacgatgagcattactattgcatgacatctctgtttttgattagttaagaatcattagatttttagagaaattattgtgaatagattttgcaaacccataactttattttcacttctatcaaggaaccacaaactcaaattcgaattccaaatagctgagagctaccatgttaaagagcaatacttgtaaaaaaaaactgcaattctgtcagaaagccacatcagttgtcaacatgctaccatgtctgtccatactggactactcacttctcatcccattttccaccttcattggtgtgttgacaacttgacatatttttataggcatgctatccctgaataccttaccccttagctttccatggtgctggggagatgagggtgtcacccttgtcctcctttgaacctgctactccactactgcctccgttcagttcctgtctcccaaacacacaaacctgtggcaattgacattgtcataccatggtggtattttggcaaactaagacttacccagtgaattgttggcaatgatcatacttgagcttgaacagttgcatatactagtttgttggctgcctgagctgccttctaagttacctgttataagtttcatgctggtggctcctaccgtccggagactattttgtaaaacctacagatgaatattttggaagtccatgctacgtgcctatatccaatcataattcacacccaaccaaatttaacgtgaatacgtgatatcagtaaatatccatccatatccaaaagacatagtccatataactgcaaattacaaattgatctgtttacaaaccagagcgcccatgccattatcatggaagcctcggtgaatatttgtgcagaaatagttgcagtcacctttcttttgacatgcatgccatcctgaatatttaatgaattctgcttgtgctatctagttatacttcccttaatattttatcatcttttctcagagcaatcccatggtcattgtatattctaaaagcaaagaaggagcacttgaagaacttgggcgtactgaagtaatattgaattctttgaacccatcttggaatgcaagaatcaacgtgcactaccagtttgaggttcttcaaccaattgtgtaagcgtctgttacaatttactgtaaaattgtcacatggtacccattaattatgctattcttttaacagctaactttctttacaggtttcaggtatatgacattgatccacagtttcatgatgtcaatgaaaaggtaatttggttagttgttttcgttcttgctttcaaatatctttttgtccattcagccagttataaagtccaaagatgacaagatctggcatgttagagggaccctttggtcagcagggataaatgtagcgtaaattcagttatttgtgagttaggttgaatgaagtcttaattttatgcctaacataaaataaactccatactaagaattaacgcttgtgcttatgataactatagatttgaattaccttagtttgctctttctagtccctagcatttccttgtgctgatgttattaagctacatttaaatgcagaagtttgattcttctaggatgttagagcatctgatgtatggactattgagcacattcttctttcgttcttctttcagttactttacaatacttactctaatatgatattcaacacagatgcttaaactggaagagcaacaatttcttggggaggctgtctgtcttttgtctgaggtatgcctgactttggctaaaaaaattttgtggtcatttattcctctcggttatttaatatacataataccttatgttgacacatgatttcttattgtgtactgtttgtcatggaatggagaactttaaaactcattgaaaaggccttaaacgtaaggtggattccatgtattcttcctactcttcaatttgtcatatatgaaatttatacactattggagttgttttgataatttaaaggtaaaaggaaacttaacctgtgaaggaaaacttaactgttctgtactgtttctgttatagaccaggttcatcctgtcacatgcatgtatatatagcttctgccattttggtgccctacaaaacaacacccataaattcctgtagttttactatgagcacatctcttttcatgattgcaaagttacacttgtatcagattaagagtaacgccaattcaaaagcctgtattattagtctgtttgaagattactccttatgttagatgcttggcgtttttaattttttacaagatcatgatgtttttgcaggttatcactaaacaaaacagactgttgactctaaagcttggcgtttccgaacataacctaccaaatcctagtaaatttggtgaactaaatgttcaggcagaagaaagtgctggttcaaaagcaataatggagatggtattccgctgttcagatcttgaaatcaaggaccttctctcaaaaagtgtaagcttatgtttctattaccttgttcatttttattttgtatgtatttaccattgttgtacctgcagttcgtccatgcctctctgtacctaaacacgacttgtttattctgtgtattgtaagtgtttttaccattctaagtttgcttgttacaggatccctttttactaatatctagaatatcagagagtggagtgcctgttccaatttgtaagacggaagtaaggaagaacgacctcaatcccaagtggaagccagtgatcttgaatctccaacagattggaagtaaggcatgagaactttcttcatccttttgcattttctatttatgttggccaatgaccaatgatttgtatgaaactaaccaggtatattctgttgcaggagaaccctttaatcatagagtgcttcaacttcagtagcaacggcaaacatgacctaatagggtaattattctctttttgtatggtttttgcacactataaatgcatgtccttttattttttgctgttactttaatccctttactagtatgttctatggtaccttagatcccaggctattaattgttgaattccaatttgttttctgattaatcgtatctcaccatgctttttgctctgattgtaaatgcatgtccctttattaattttgtttttgctgtttattctgtttactagtatgttctatggtaccttagatcctgggccattaattgttgaattccaatttcttttctgattagataccctttgtaattcgacagcaagatagtaaaatcggtcgcagaattggaaaagatgtatcatagtcaggatggtgaaaatttctttgttcctgccagcactgctcatgatagtcacagtaaggaggtaatatttgttactgtagaactctgcggttgctatattgtagtaactgagtgttactattgcatgtaggtactaaagagtcaagtgtatgtggagaaatatcttgagaacaacagacagacttttctagattatatttctgctgggtgccaattgaattttatggtagccgtagacttcacaggtgtgctagttcttgctgatcttaccctatttcagctctctagttcataaactcatacttaattcgttgccctcgatgttttgtgctctgtagcttcaaatggaaatccacggcttccagattccttgcattatattgatcccactggtcggccaaatgcatatcagagagtaagcaattgattcattatctcttagttcttgtgttccgatggccctctgagaacattgatttaagtacttccactgttttttattggtggcaggcaatactggaagtaggagatgtactacagtactatgacccagctaagcggtttccctcatggggctttggtgctagacctattgatggtcctgtttcccactgtttcaacctgaatggtagcacctatcaacctgaggtattctactttttgctaccttaattactaccgacttctgcagaagaattaccaagtgccacatctgggaaacaaacatggaaatcttccttttcttgcccatcttattttagtttacaacacatttctttctcttttgtaagaaattttgtacttggtgttttatggttttgagatgtttcttgaagttatctgttagctgtttgcctattgcctgagtgcctgactatatcaaacttccttaggttgagggaatacaagggattatgtcagcttatatcagtgcgcttcgtaatgtctcattggctgggcccaccctatttggtccagtagttagcactgctacggcaatagcaaaccaatcacttgccaacaaccagcagaaatactttgttctgttaatagtcacggtatgcataaagaggaatccatgttttcctaaaataatatttttttttcttctgtgctgtcaatgttattctttttgttgtccaggatggtgtggtgactgatttccaagagactatcgatgcaatcataaaggcatctgattttcctttgtccattcttgttgttggagttggtggagcggacttcaaggaaatggaggtaatgggactggaaaatttcttgcacttttatgattcgtctgcatatttcttatcagagcaaaaattcaagcgttaaccatatcatctgtcagttctattttttctgaagttttttgtttacataagtatgacagattgtaccgtaatgccatgatgtgattggctgattgctaatgctttagcgtcatacaaaaaatgtggaacctcaagttgatgttaaaatttcaccttgcaccttgcagtttctagatccaaataaaggagagagactagaaagctcaacaggaagagtggcatcaagggatatgatacagttcgccccaatgaaggatgcccatggtatgcatttccttctgcatgtgatgattcttggtatcttgcgttacatggaaaactaagcaaatgtgataattcaattctgtgcttgcaggcagtgggatttcgacagttcagtcacttcttgctgaaataccagggcagttcatgacctacatgagaacaagagaaattcaagcaatcagttaatatatggtgccgtctatttgtgattcttagttgatagaagatgcacattctaatggtcttgttggtatggttttggctgttgggccacatcatcatgcaaattttaaagccattgatgtgtgaaaaggtggaaagatggatagtctggacatgttacaagtaagaaatatggatctgctggaaatttgtagccaaggtctaatatcagtggcgcattgtccgtacttgtcttgttgctactcatgttgacaatgtggtgcagggcaattgaattgaggcatgaattgcttggcactgcagattggaaactgttgtctctgaagaaacatttgaattgtgtatgattcgtgtaaaggtcaaaggttcgtagtttcgaacttgctgctcaaatcaagcgagtggtagtttttttttcttctatattctggttatggtgctgagtttcctcagattagcggtttctatctgggattcgtcttcttcatacctgcgtgtaagatcatgtcttgaaattaagggtttgaaccccatgttgactctttgtgcgtacctggtaaaaaacatttttgtcagtaactctaccatgttctggtgttatattgatgttacatatagttctgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0521300, RefSeq:Os02g0521300