Os02g0529400

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Revision as of 02:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0529400| Description = Plant neutral invertase family protein| Version = NM_001053547.1 GI:115446464 GeneID:4329537| Length = 4324 bp| Def...")
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Gene Name

Os02g0529400

Description

Plant neutral invertase family protein

Version

NM_001053547.1 GI:115446464 GeneID:4329537

Length

4324 bp

Definition

Oryza sativa Japonica Group Os02g0529400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20295605..20299928

Sequence Coding Region

20295970..20296560,20297026..20297191,20297284..20297495,20298571..20299064,20299150..20299198
,20299354..20299662

Expression

GEO Profiles:Os02g0529400

Genome Context

<gbrowseImage1> name=NC_008395:20295605..20299928 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20295605..20299928 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggattgcggaggtggccctccacagtatgccgggggcattcgccgcccactccccggcatccaatttgcccctcgcggccgacgccgcgaggggcaggaggaggaggagcgccaattcgttgcacagctccagggcgctccaaggtccggtcaggtttccggggctgcgggccgccgtggagtgccagtgccagcgcatcgatgaccttgcgagggtcacggaagggaacggggcgtgggttaaggatgcggtggacaaggcaagccatgctctcggtgatgtgagggtgcctggtcaggctgtaggtggcaatgggagcgtaaacgggagcgccgccaagcctccgccccagcggcggaaggcgtcttctgtggaggatgaagcttgggagctcttgcgggagtccgtggtttactattgtggtagtccggtcgggacgattgctgccaacgacccgaatgatgccaatccgatgaattatgatcaggtgtttattcgggatttcataccatctggcatcgcgtttctattgaagggagagtacgaaattgtgcgcaatttcattttgcacacccttcagcttcagagctgggagaagacaatggactgccatagtccaggacagggcttaatgcctgctagcttcaaggtgcgaacaattccactcgatggagatgaagatgcaactgaggaggtcttggatcctgattttggggaggcagcaataggccgtgtggcacctgttgattcaggtctatggtggatcatattacttagggcgtatggaaagtgttcaggagatctgacagttcaggagagaattgatgttcagactggaattaaaatgatattaaagctttgtttagctgatgggtttgacatgttccctacattactggtaactgatggatcatgcatgattgatcgtcgaatgggaattcatgggcatccacttgaaattcaggcactgttctattcagctctcctgtgcgcgcgtgaaatgttaaccccagaagatggatcagctgatttaatacgtgctctaaacaataggcttatcgcactgtcctttcatattagagagtactattgggttgacatgcagaagctgaatgagatttatcgatataaaacagaagaatattcctatgatgctgtgaacaagttcaacatatatcctgatcaggtttctccgtggcttgttgagtggatacctcctaaaggaggttacttcattgggaacctgcagccagctcacatggacttccggttcttttctctggggaatttatggtccatagtaagcagcttggcaacaactcatcaatcccatgccattttggatctgattgaatccaaatggtctgatttagtggcagagatgccattgaagatatgctatcctgctctagagaaccaggaatggaagatcattactggaagtgacccaaagaatacgccttggtcatatcataatggaggatcctggccaacattgttatggcagctcacagtagcatctatcaagatgaacagaccagagattgctgcaaaagctgtagaggtagctgagaggcgaattgctatcgacaaatggcctgaatactatgacaccaaacgagcacgcttcattgggaaacagtctcgtctttaccaaacctggtctattgctgggtaccttgtggccaagcaactgctggacaaacctgatgctgctagaattctttcgaacgacgaggattcagaaattcttaatgctttgagcacaaacaggaaaagaggcaagaaagtgttaaagaagacattcattgtatga</cdnaseq>

Protein Sequence

<aaseq>MGIAEVALHSMPGAFAAHSPASNLPLAADAARGRRRRSANSLHS SRALQGPVRFPGLRAAVECQCQRIDDLARVTEGNGAWVKDAVDKASHALGDVRVPGQA VGGNGSVNGSAAKPPPQRRKASSVEDEAWELLRESVVYYCGSPVGTIAANDPNDANPM NYDQVFIRDFIPSGIAFLLKGEYEIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFK VRTIPLDGDEDATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLTVQERI DVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAR EMLTPEDGSADLIRALNNRLIALSFHIREYYWVDMQKLNEIYRYKTEEYSYDAVNKFN IYPDQVSPWLVEWIPPKGGYFIGNLQPAHMDFRFFSLGNLWSIVSSLATTHQSHAILD LIESKWSDLVAEMPLKICYPALENQEWKIITGSDPKNTPWSYHNGGSWPTLLWQLTVA SIKMNRPEIAAKAVEVAERRIAIDKWPEYYDTKRARFIGKQSRLYQTWSIAGYLVAKQ LLDKPDAARILSNDEDSEILNALSTNRKRGKKVLKKTFIV</aaseq>

Gene Sequence

<dnaseqindica>366..956#1422..1587#1680..1891#2967..3460#3546..3594#3750..4058#actccacccagtccccctcccccccgcccttcgccgccgccttctccggcgaaccggtggccactcgcgcttcccaacgtaccgtggcggtccggccggtgagttgctccccccccccccgcctcctctcctcctcgcgctaatcatttgcgccacttgttcatgtgatccctcgcgcgcggctgttcttgccatgctgagcgtagcgaacatggaatttgggtttggtttttttttctttcgattatcgcggaattcgtttcggtttgggatcttcgtttctggtggttgttagcttttatctaacacatggccgtgcgcggtgcttcttgcagtcacccatttgagttgggagcacggtggcaatggggattgcggaggtggccctccacagtatgccgggggcattcgccgcccactccccggcatccaatttgcccctcgcggccgacgccgcgaggggcaggaggaggaggagcgccaattcgttgcacagctccagggcgctccaaggtccggtcaggtttccggggctgcgggccgccgtggagtgccagtgccagcgcatcgatgaccttgcgagggtcacggaagggaacggggcgtgggttaaggatgcggtggacaaggcaagccatgctctcggtgatgtgagggtgcctggtcaggctgtaggtggcaatgggagcgtaaacgggagcgccgccaagcctccgccccagcggcggaaggcgtcttctgtggaggatgaagcttgggagctcttgcgggagtccgtggtttactattgtggtagtccggtcgggacgattgctgccaacgacccgaatgatgccaatccgatgaattatgatcaggtgtttattcgggatttcataccatctggcatcgcgtttctattgaagggagagtacgaaattgtgcgcaatttcattttgcacacccttcagcttcaggtacttgcttcgttgcttcctcattgttgcatcgtgttttagatccaggccttgtattgatcgtgacagtgtaaatgaacattccggtaataaaattatttcacatgagccagctttgataatttcaattcatgttgtgaccatctgaatatgttgctctaggtttttttctttagacatataatagcttgatctcttgaggaagtgcgcacgatggtaaggcctgtttcttatgagctgctttggtccacataaaattgttgacagaaagttggctgtgtgcttgctttctcatgtaaaagtcgatgcacaatgatacaattacacatcttaaatgtgttggcttactgagattgccatccttaaagttcttggcaaatatctcttctagttaccgtagcaacaaaatgaatttgtatgccctatccaaggtgtaacaagttctgctgtcattttgttatgtagagctgggagaagacaatggactgccatagtccaggacagggcttaatgcctgctagcttcaaggtgcgaacaattccactcgatggagatgaagatgcaactgaggaggtcttggatcctgattttggggaggcagcaataggccgtgtggcacctgttgattcaggtagagctactaatggagatagctagcacatcctcttttttgctactctgcttctactaactcttaactggatatgtgattgatggtttcaggtctatggtggatcatattacttagggcgtatggaaagtgttcaggagatctgacagttcaggagagaattgatgttcagactggaattaaaatgatattaaagctttgtttagctgatgggtttgacatgttccctacattactggtaactgatggatcatgcatgattgatcgtcgaatgggaattcatgggcatccacttgaaattcaggttttttacgatactcctgtcaattctgtgtcttttgtgaatggattttatcccattcaatcaaaagcatgtgtaccctcaaaagttaaacctatcttttccaatcccctgagttttttcagcgatctccatatgaaagtggctcgctaagataactgaaagctgacttgactcaaaacgcacaaaatggtcattttcatagccacttaacagtcaactcacaaaatgggcatggaaatgatagaagtttaaagtcaggagcatgtagagcaaggaacttaattttaaaactgaagcaagattcatcaattagaaaaatcttgtaacatcataatatctaacttttaacacacagaagatttatatagtttttttttcatttaattttccaattccagtatttccatttcaatgatttgcaaaaactatatggaaacatgtaattttcttgttcagttcctgctgtatcatgtgtcacccacatggcagtgaggtatgagtactaattaatctgggttactgttggcatatcagaaatttcagctaaggtagttatttggatgattaacaaatataaacttttgaaattggacacttcctacaagtttctcacgatcaaaattaaaaacaattgcaattagccatagtaaatttctgttgcaatagagtatattttctatttaagtttcgtaataagatataaggaccaaagtcaatcttgaaaaagtttgaatgcaacaagatgataggaataactgtgatgtcgtcctcaacaatgttagttcataggtgtgcacattgaataatcagcatcaatgatgaagaggatggcctgcttctcctgctgatgctcctaataactttcctctgccttatcctagtttaagtgaactgaatacattcatcaccttaatccaaggcctcacttacattttatattcagacgtaactttacaaggtaagggctataataatatttttcaaaaaaaggggctgacattgagtattcctgtatttttcattacagcttctcttttgtgataaagcaaactcacgtaaatattgttttatgtaggcactgttctattcagctctcctgtgcgcgcgtgaaatgttaaccccagaagatggatcagctgatttaatacgtgctctaaacaataggcttatcgcactgtcctttcatattagagagtactattgggttgacatgcagaagctgaatgagatttatcgatataaaacagaagaatattcctatgatgctgtgaacaagttcaacatatatcctgatcaggtttctccgtggcttgttgagtggatacctcctaaaggaggttacttcattgggaacctgcagccagctcacatggacttccggttcttttctctggggaatttatggtccatagtaagcagcttggcaacaactcatcaatcccatgccattttggatctgattgaatccaaatggtctgatttagtggcagagatgccattgaagatatgctatcctgctctagagaaccaggaatggaagatcattactggaagtgacccaaagaatacgtgagttttcggaataattatctttgcatctatgtacatgttcaagttccaatgagcatcttcttagtaatatctattgattcaggccttggtcatatcataatggaggatcctggccaacattgttatggcaggttcgttattctgtaacaaagttttttttttttgtggttgaaattgctgactttgtttttacctgatgcagacagtttgtagtaacaattgacaattcactatgatttgtttgctcaacatatagttgctgagaaattactttctttgcgtgcagctcacagtagcatctatcaagatgaacagaccagagattgctgcaaaagctgtagaggtagctgagaggcgaattgctatcgacaaatggcctgaatactatgacaccaaacgagcacgcttcattgggaaacagtctcgtctttaccaaacctggtctattgctgggtaccttgtggccaagcaactgctggacaaacctgatgctgctagaattctttcgaacgacgaggattcagaaattcttaatgctttgagcacaaacaggaaaagaggcaagaaagtgttaaagaagacattcattgtatgagttcttgaagcaaaagatccatcacttggttctttaagttagcatttaagttataggaaatatcttcctgtatatatacacgaaaggatatgtttggacggagagatgcctgctgttggatgctgttattgtagatgcatctggcttttgcaagaaagcacttgcctgggcatttctcaattgtatccctttcatcaatttttgtacactagacttgcctcttgtagtttaccatatactccatttgacatgacaaattctgtgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0529400, RefSeq:Os02g0529400