Os02g0529600

From RiceWiki
Revision as of 02:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0529600| Description = Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)| Version = NM_001053549.1 GI:115446468 GeneID:432953...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0529600

Description

Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)

Version

NM_001053549.1 GI:115446468 GeneID:4329539

Length

1907 bp

Definition

Oryza sativa Japonica Group Os02g0529600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20309537..20311443

Sequence Coding Region

20309722..20311164

Expression

GEO Profiles:Os02g0529600

Genome Context

<gbrowseImage1> name=NC_008395:20309537..20311443 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20309537..20311443 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcaggaagggatggggtacaacaacggcaaggggggaggaggcggtggcggcgggctgccgatgacggcgccgcggccgcgtggggcgtcgccgctgagcagccacggccaccaccaccgctcgcgcaagatccaccgcaccttcaacaacgtcaagatcaccgtgctctgcggcctcgtcaccatcctcgtcctccgcggcaccatcggcctcaacctctccctccccaaccagcccaccgacgccgacgcgctcgccggcgccaaggccgtcgaggacatcgaccgcatcctccgcgagatccgctccgacggcggcgccgacgacgacgccgccgccgccggggacctcgccggctccttcaacgccaccgcgctcaacgccacggaggcggcggcggcctacgcctccgctgtcgaacgctacgcgctcggccccaagatctccgactgggacggtcagcgccgccgctggctcaggcagaaccctgggttcccgtccaccgtcgccggcggcaagcccaggatcctgctcgtcacgggctcgcagccggggccctgcgacaacccgctcggcgaccactacctgctcaagaccaccaagaacaagatcgactactgccgcctccacggcatcgagatcgtccacaacctcgcccacctcgacaccgagctcgccgggtactgggccaagctgcctctgctccgccgcctcatgctctcccacccggaggtcgagtggatctggtggatggacagcgacgcgctcttcaccgacatggctttcgagctgcccctctcgcgctaccaagaccgcaacctcatcatccatggataccaggatctcctctttgagaagcactcatggatcgcgctcaacaccggcagcttcctcttccggaattgccagtggtcgcttgatcttcttgatgcgtgggcgcctatgggtcccaagggattcatccgagatgaagccgggaagatacttactgccaacctcaagggacgcccggcatttgaggctgatgatcagtctgctttgatttacctcttgctctcgcaaaaggagaagtggatgaacaaggtgttcatagagaattcgtactacttacatggcttctgggctggtctagtagataagtacgaggagatgatggagaaccaccatccggggctcggggatgagcggtggccattcgtgactcattttgtcgggtgcaagccatgtggaagctatggggattatcctgtggagcggtgtctcaggagtatggagcgagcatttaattttgccgataaccaggtgctgcggctctatgggtttgctcacaaggggctcgaaagccccaagatcaagagggtcaggaatcagaccacaaagcctattgatgacaaggagaatcttgatgtgaaggccaagatatcgaccacttcttga</cdnaseq>

Protein Sequence

<aaseq>MGQEGMGYNNGKGGGGGGGGLPMTAPRPRGASPLSSHGHHHRSR KIHRTFNNVKITVLCGLVTILVLRGTIGLNLSLPNQPTDADALAGAKAVEDIDRILRE IRSDGGADDDAAAAGDLAGSFNATALNATEAAAAYASAVERYALGPKISDWDGQRRRW LRQNPGFPSTVAGGKPRILLVTGSQPGPCDNPLGDHYLLKTTKNKIDYCRLHGIEIVH NLAHLDTELAGYWAKLPLLRRLMLSHPEVEWIWWMDSDALFTDMAFELPLSRYQDRNL IIHGYQDLLFEKHSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGFIRDEAGKILTAN LKGRPAFEADDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKYEEMMENHHP GLGDERWPFVTHFVGCKPCGSYGDYPVERCLRSMERAFNFADNQVLRLYGFAHKGLES PKIKRVRNQTTKPIDDKENLDVKAKISTTS</aaseq>

Gene Sequence

<dnaseqindica>280..1722#gccccagaagccaacaataacgggagaaaagaaaaaaaattgagccgcggaaggccggaaggggactccccgtcgcctcctctcctccaaatcccaacccacctcaccgatcccatctcaattctcaccgcctcaccgcgcccgcgccagcgcctcgcccatgtgatgtgagtgagccactcacactccccctctctatcgccgcgcccccgattcgcgagccgccccgatccctcccgcgcggctgataaatccgaggcggctagggttgggggtggaatggggcaggaagggatggggtacaacaacggcaaggggggaggaggcggtggcggcgggctgccgatgacggcgccgcggccgcgtggggcgtcgccgctgagcagccacggccaccaccaccgctcgcgcaagatccaccgcaccttcaacaacgtcaagatcaccgtgctctgcggcctcgtcaccatcctcgtcctccgcggcaccatcggcctcaacctctccctccccaaccagcccaccgacgccgacgcgctcgccggcgccaaggccgtcgaggacatcgaccgcatcctccgcgagatccgctccgacggcggcgccgacgacgacgccgccgccgccggggacctcgccggctccttcaacgccaccgcgctcaacgccacggaggcggcggcggcctacgcctccgctgtcgaacgctacgcgctcggccccaagatctccgactgggacggtcagcgccgccgctggctcaggcagaaccctgggttcccgtccaccgtcgccggcggcaagcccaggatcctgctcgtcacgggctcgcagccggggccctgcgacaacccgctcggcgaccactacctgctcaagaccaccaagaacaagatcgactactgccgcctccacggcatcgagatcgtccacaacctcgcccacctcgacaccgagctcgccgggtactgggccaagctgcctctgctccgccgcctcatgctctcccacccggaggtcgagtggatctggtggatggacagcgacgcgctcttcaccgacatggctttcgagctgcccctctcgcgctaccaagaccgcaacctcatcatccatggataccaggatctcctctttgagaagcactcatggatcgcgctcaacaccggcagcttcctcttccggaattgccagtggtcgcttgatcttcttgatgcgtgggcgcctatgggtcccaagggattcatccgagatgaagccgggaagatacttactgccaacctcaagggacgcccggcatttgaggctgatgatcagtctgctttgatttacctcttgctctcgcaaaaggagaagtggatgaacaaggtgttcatagagaattcgtactacttacatggcttctgggctggtctagtagataagtacgaggagatgatggagaaccaccatccggggctcggggatgagcggtggccattcgtgactcattttgtcgggtgcaagccatgtggaagctatggggattatcctgtggagcggtgtctcaggagtatggagcgagcatttaattttgccgataaccaggtgctgcggctctatgggtttgctcacaaggggctcgaaagccccaagatcaagagggtcaggaatcagaccacaaagcctattgatgacaaggagaatcttgatgtgaaggccaagatatcgaccacttcttgaaaagtcctgatgagagttggtatggcaatagcatacttgctttggctctcttcaaggtcagagcattttgtgacttggggatggtgttgttttattttccactctttttttctattctttttgttcatggaattgttattgttatgtaacagttagaggttgcaatctaatgtttatcatggagt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0529600, RefSeq:Os02g0529600