Os02g0535000

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Revision as of 02:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0535000| Description = Conserved hypothetical protein| Version = NM_001053573.1 GI:115446516 GeneID:4329565| Length = 2820 bp| Definition ...")
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Gene Name

Os02g0535000

Description

Conserved hypothetical protein

Version

NM_001053573.1 GI:115446516 GeneID:4329565

Length

2820 bp

Definition

Oryza sativa Japonica Group Os02g0535000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20572714..20575533

Sequence Coding Region

20573063..20573140,20573477..20573610,20573859..20573986,20574075..20574151,20574233..20574319
,20574412..20574525,20574629..20574743,20575258..20575469

Expression

GEO Profiles:Os02g0535000

Genome Context

<gbrowseImage1> name=NC_008395:20572714..20575533 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20572714..20575533 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtactactgcctcgccgcgccgccggccgctgcggcaccggcagcgccagcggcgaggcgcgcgtcctctttcctcttcgtggtgtcggtccctcctccgactttatgggggagggtgacgggaggcgccgtgtccgcccagcggctggtgcggcggcggtgctcctccgccggcgagcccagggcggccggcgacggtggcctatccagtttttgcataattgaaggcccagagactatacaagactttgttcaaatgcaatcacaagagattcaagacaacatcaggagccgccgtaacaaaattttccttttgatggaagaggttagacgattgcgggtgcagcagcgaatcagaacttctgaaagcagaggtgcaagcagtgaagaaagtgaaatgcctgaaatcccgtctagtattccctttttgcctaatacgtcaccgaagacaatgaaacaactctatttgacatcattctcattcataactgggataatcttttttggaggcttgatagccccagtacttgagctgaaattagggctaggtggtacatcttatgaagattttataaggaccatgcacttgcctcttcaattaagtcaggtagatcccattgtggcatccttttcaggtggtgcagttggtgtaatctcggcattaatgttggttgaaattagaaacgtcaggcagcaagagaagaaaaggtgtacatattgccatgggactggatacttgccatgcgctcgctgttctgcaagtggaatgctattgaacagcaagagtttttcactttcatgtgacaacggccataatatgtggtctacaaccgaaaggtgccccaattgttcaggagctggaaaggtgatgtgcccaacttgcttgtgcacaggaacggcaatggcaagcgagcatgacccacggatagaccccttcgattag</cdnaseq>

Protein Sequence

<aaseq>MYYCLAAPPAAAAPAAPAARRASSFLFVVSVPPPTLWGRVTGGA VSAQRLVRRRCSSAGEPRAAGDGGLSSFCIIEGPETIQDFVQMQSQEIQDNIRSRRNK IFLLMEEVRRLRVQQRIRTSESRGASSEESEMPEIPSSIPFLPNTSPKTMKQLYLTSF SFITGIIFFGGLIAPVLELKLGLGGTSYEDFIRTMHLPLQLSQVDPIVASFSGGAVGV ISALMLVEIRNVRQQEKKRCTYCHGTGYLPCARCSASGMLLNSKSFSLSCDNGHNMWS TTERCPNCSGAGKVMCPTCLCTGTAMASEHDPRIDPFD</aaseq>

Gene Sequence

<dnaseqindica>2394..2471#1924..2057#1548..1675#1383..1459#1215..1301#1009..1122#791..905#65..276#accatacaccagcagcgccctgcagctgcaagcctgcaactagtcgctggccggccggccggccatgtactactgcctcgccgcgccgccggccgctgcggcaccggcagcgccagcggcgaggcgcgcgtcctctttcctcttcgtggtgtcggtccctcctccgactttatgggggagggtgacgggaggcgccgtgtccgcccagcggctggtgcggcggcggtgctcctccgccggcgagcccagggcggccggcgacggtggcctatccaggttgggttactgtagcagctgccttatcaaaaccaacgccttcttctgttctgttctaggaaatggatggggttcttgagctactcctcgatttggcaattgcacagtaacaacatgttgaaaactcgtaaattcagattgtacatatggttcacttaaaattcagattgtacatatgctcttagtgatctgtcagctgtggtggctgcctggtgtagtgctatcgtagaaaaaataaatgttttttgcaacttaggaaaccatgtatccaaaaattgaccaagattacaaggaagtcatcacaagaatgtagttgttgagagtaaaaatggcgctatggtaagagtaatgtaagtatgaattagatattgaggagtcctatcaaaaagttctcaagtattgttaagtgtatacaccttctgcaaatacctagtattatattggataatctttgttatctttgcataaaaatgtaggtgtgagaaaaatatattaaaaaaattttcttctacagtttttgcataattgaaggcccagagactatacaagactttgttcaaatgcaatcacaagagattcaagacaacatcaggagccgccgtaacaaaattttccttttgatggaagaggtgtctagtatatatatgaacttcatctcttcagtttaatagtccatttttagcttgttgaaacagcagattgcagttcaccacaatatgggtattttctcaggttagacgattgcgggtgcagcagcgaatcagaacttctgaaagcagaggtgcaagcagtgaagaaagtgaaatgcctgaaatcccgtctagtattccctttttgcctaatacggtgattaccggccctcaataagtctccttaagaaatttaccatactgttttcccagtaatctctattaattcctttctttttcctgatgtagtcaccgaagacaatgaaacaactctatttgacatcattctcattcataactgggataatcttttttggaggcttgatagccccagtagtaagtgcagctttgtctctgtattcatacttccttcctaattaatatatcatggctcttaaaagtatgtttttcatgcagcttgagctgaaattagggctaggtggtacatcttatgaagattttataaggaccatgcacttgcctcttcaattaaggtgcttgaaatttttgttactagactcttcagtagtgtttactgattagaattggtgatttgatatatgctttttggttgttgttcagtcaggtagatcccattgtggcatccttttcaggtggtgcagttggtgtaatctcggcattaatgttggttgaaattagaaacgtcaggcagcaagagaagaaaaggtgtacatattgccatgggactggtataatcaattgccttaccatccgtctgcccctaacatggctcggtcatgcccctaatgtagtaccaaatacaaaaatggaatatgcttgaaacattgttttgcttcttgtgctaacaccaattatcacgatccttcttttgttcttttctctctctctctctctctcttttcctgatatcattactctttaggctttgatattatcttactgcattctcatacctgaacttgattctgcatcataggatacttgccatgcgctcgctgttctgcaagtggaatgctattgaacagcaagagtttttcactttcatgtgacaacggccataatatgtggtctacaaccgaaaggtgccccaattgttcaggagctggaaaggtacccgctatcgaattctgtttcgtttcagaaaactcagtttgataccgtcaacaagattaaatttagaaactaaacagtttatgtacacaagaggattaaatgattagggagcagcacatactattcatatgctacttagtgcctaaattcagtgctgaccaaactttttgtttactccttctgccaaccatcctgcaagtttatcttgaactggccttttaggttgcagagtaggaaagaaatgccatttcatttcttgttctactgatctacttccccaacctgataaactcataaactgccctaattcacgtacatggtcgctattttcaggtgatgtgcccaacttgcttgtgcacaggaacggcaatggcaagcgagcatgacccacggatagaccccttcgattagtgatgagcaattggaatctggaagtgtgtattctagctgtactgttggctgccccccctttttgtttgtgttgctgtgataggcctgaatacctgaagaatgaagttcagatcacacaacgaaagccaaaagctgtaaccgtacgatgaatgaactctgtgactagtatagaactctcgtctgtggaactttttccgaattatttttgtaaagatttaaggaattacttatcgcacgtcgaacacaacgcgacggtttggccgagtggtctaaggcgccagatttaggctctggtccgaatgggcgtgggttcaaatcccacagctgtcaattctatttttaatttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0535000, RefSeq:Os02g0535000