Os10g0416500

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Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0416500| Description = Similar to Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb chitinase-1) (TBC-1)| Version = NM_001071142.1 GI:11548202...")
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Gene Name

Os10g0416500

Description

Similar to Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb chitinase-1) (TBC-1)

Version

NM_001071142.1 GI:115482027 GeneID:4348633

Length

1069 bp

Definition

Oryza sativa Japonica Group Os10g0416500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15047251..15048319

Sequence Coding Region

15047307..15048167

Expression

GEO Profiles:Os10g0416500

Genome Context

<gbrowseImage1> name=NC_008403:15047251..15048319 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15047251..15048319 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaacggctacttgttccgggagtacatcggcgcgcagttcaccggcgtgcgcttctccgacgtgcccgtcaacccgggcctcagcttccacttcatcctcgccttcgccatcgactacttcatggcgacgcagtcctccaagccggcgccagccaacggcgtgttcgccccgtactgggacacggccaacctgtccccggccgccgtcgccgcggccaaggcggcgcaccccaacctcagcgtcatcctcgccctcggcggcgacaccgtccagaacaccggcgtcaacgccacgttcgcgccgacgtcgtccgtcgacgcgtgggtgcgcaacgccgccgactccgtctccggcctcatcgacgcctacggcctcgacggcgtcgacgtcgactacgagcacttcgccgccggcgtggacacgttcgtggagtgcatcggtcgcctcctcaccgagctcaaggcgcggcacccgaacatcgccacctccatcgcgccgttcgagcaccccgtggtgcagcgctactaccagccgctgtggcggcgctacgccggcgtgatcgactacgtcaacttccagttctacggctacggcgccaacaccgacgtggcgacgtacgtgatgttctacgacgagcaggcggcgaactaccccggcagcaagctgctcgccagcttcaagaccgggaacgtcaccgggctgctctcgccggagcaggggatcgccggcgcgaaggagttgcagcggcaggggaagctgccggggttgttcatctggtcagcggatagctccatggtcagcagctacaagtttgagtacgagaccaaggctcaggagatcgtcgccaaccactga</cdnaseq>

Protein Sequence

<aaseq>MVNGYLFREYIGAQFTGVRFSDVPVNPGLSFHFILAFAIDYFMA TQSSKPAPANGVFAPYWDTANLSPAAVAAAKAAHPNLSVILALGGDTVQNTGVNATFA PTSSVDAWVRNAADSVSGLIDAYGLDGVDVDYEHFAAGVDTFVECIGRLLTELKARHP NIATSIAPFEHPVVQRYYQPLWRRYAGVIDYVNFQFYGYGANTDVATYVMFYDEQAAN YPGSKLLASFKTGNVTGLLSPEQGIAGAKELQRQGKLPGLFIWSADSSMVSSYKFEYE TKAQEIVANH</aaseq>

Gene Sequence

<dnaseqindica>57..917#atgcgccgcgtccacagctcgatcgctagccctactcgctagctagatcggcggccatggtgaacggctacttgttccgggagtacatcggcgcgcagttcaccggcgtgcgcttctccgacgtgcccgtcaacccgggcctcagcttccacttcatcctcgccttcgccatcgactacttcatggcgacgcagtcctccaagccggcgccagccaacggcgtgttcgccccgtactgggacacggccaacctgtccccggccgccgtcgccgcggccaaggcggcgcaccccaacctcagcgtcatcctcgccctcggcggcgacaccgtccagaacaccggcgtcaacgccacgttcgcgccgacgtcgtccgtcgacgcgtgggtgcgcaacgccgccgactccgtctccggcctcatcgacgcctacggcctcgacggcgtcgacgtcgactacgagcacttcgccgccggcgtggacacgttcgtggagtgcatcggtcgcctcctcaccgagctcaaggcgcggcacccgaacatcgccacctccatcgcgccgttcgagcaccccgtggtgcagcgctactaccagccgctgtggcggcgctacgccggcgtgatcgactacgtcaacttccagttctacggctacggcgccaacaccgacgtggcgacgtacgtgatgttctacgacgagcaggcggcgaactaccccggcagcaagctgctcgccagcttcaagaccgggaacgtcaccgggctgctctcgccggagcaggggatcgccggcgcgaaggagttgcagcggcaggggaagctgccggggttgttcatctggtcagcggatagctccatggtcagcagctacaagtttgagtacgagaccaaggctcaggagatcgtcgccaaccactgatcgtccatcgaacggtcgtgataatacttatgaaataagagcaaataaattgcgaaataatggtcgtattatatatcgagcgtcattatgcacgacttacgtgctaaataagaaatggacttatgtgccgattggtaatcggcgatatatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0416500, RefSeq:Os10g0416500