Os02g0537400

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Revision as of 02:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0537400| Description = Chaperonin clpA/B family protein| Version = NM_001053583.1 GI:115446536 GeneID:4329576| Length = 3285 bp| Definitio...")
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Gene Name

Os02g0537400

Description

Chaperonin clpA/B family protein

Version

NM_001053583.1 GI:115446536 GeneID:4329576

Length

3285 bp

Definition

Oryza sativa Japonica Group Os02g0537400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20719086..20722370

Sequence Coding Region

20720573..20720647,20720733..20721073,20721166..20721445,20721538..20721735,20721848..20722120

Expression

GEO Profiles:Os02g0537400

Genome Context

<gbrowseImage1> name=NC_008395:20719086..20722370 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20719086..20722370 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaaataacaatggaaatacgtcagtgaatggagtgaacgaagcaattgttggcccagatcatgttgctcaagttgtgagccgatggactggcatcccggtcactacacttgatcaagaggagaaggagaagttaatccacctggcagacagattgcacgagcgagttgttggccaggatgaagctgtcaaactggttgcacaggcagttttacgttctagggcaggccttgaacaacctggccaacctataggctctttcctctttctgggctcaaccggtgttggaaagacggagcttgcaaaagcccttgctgagcagctatttgacagcgagaagatgttgatccgctttgacatgtctgaatttgttgggagtggatctgtgttgcgtctcattggagcacctccaagctatcatggccatcaagatggcggacaattgacagaaaaagttaggacgcgtccttacagtgtcatcctttttgatgaggtggagaaggcagatccctcggtgttcaacgtgttccttcagctcctcgatgatggcatgttgactgatggcaaaggaaggacagtagatttcaagaacaccatcatcattatgacctcaaatctgggagctgagcacctaactgaaggagtgactggtgaaagaacaatggaagctgcacgggaccttgttatgaaacaagttcagaagtatttcaggcctgaacttctcaacaggctgagtgagattgtgatatttgagccgctttcgcacgacaatcttaaggaggtcgtcaaaattcagatgaagagtgtcgttaccagtgtggctcacaagggcgtatctctacttgcaagtgatgatgccttggacgtcatcttgtctgaatcatacaacccaatgtatggggcaagaccagtaaggaggtgggtgcagaagaatgtgatgacaaagctctctgagatgcttattacaggagatgctggacaggggtcaactatttccattgacgctactgatgacaagaaggggctgaactttcaagtattgaaggaggaggtagtggttccgcgaggcaagaggccagtcgaggagcttcaaagcgactcggatagcgatgacgatgtgttcgagatcgcccccataccaaagaggaagaaaggtgattattag</cdnaseq>

Protein Sequence

<aaseq>MQNNNGNTSVNGVNEAIVGPDHVAQVVSRWTGIPVTTLDQEEKE KLIHLADRLHERVVGQDEAVKLVAQAVLRSRAGLEQPGQPIGSFLFLGSTGVGKTELA KALAEQLFDSEKMLIRFDMSEFVGSGSVLRLIGAPPSYHGHQDGGQLTEKVRTRPYSV ILFDEVEKADPSVFNVFLQLLDDGMLTDGKGRTVDFKNTIIIMTSNLGAEHLTEGVTG ERTMEAARDLVMKQVQKYFRPELLNRLSEIVIFEPLSHDNLKEVVKIQMKSVVTSVAH KGVSLLASDDALDVILSESYNPMYGARPVRRWVQKNVMTKLSEMLITGDAGQGSTISI DATDDKKGLNFQVLKEEVVVPRGKRPVEELQSDSDSDDDVFEIAPIPKRKKGDY</aaseq>

Gene Sequence

<dnaseqindica>1488..1562#1648..1988#2081..2360#2453..2650#2763..3035#ttcaggatgctgccattgtcgctgctgcacagcttgcggaccgctacattaccggtgagaaaatttttcattttgtttaagggaccgaaaaacagtcagatttttcattatactgtaagttacacatatttacacttaacactgtaaatgtctcttgcaatgtaatgtttgcatagtgtgcaaattgcttaactatacttggaagaggagataggagaaaacatgcttatatatacaagagagcgaggtagcaatcaagtaaaaaaaatgtgagaccatatttttagcaaaaccgtttaattagtttattccttgtgctttcatgatactaccggttaagggggattgcacatattctagggttgttgtacatgtcttttgggattacgagttttgttccgggattacattccctgttgtttaagttttgtagggattttaatatcaaattcccattgtcagtatacaattttgttagaagctagtggtatagaacttcacctttttatgaattcggtagcatggacaacactaggaatctcacagtcgggatgccagtatttggccagatgaaaatttggagttgggtcaaattttaacatctgggagaggacttaggtgactcttcatgttagacattcttaaatttgtacaatccatttttttaattggagctaagaattcttatttttaattcatgtatgtgagatgaatcaggccatgaactttcagaaaaaaagaagtcatctcgttgaccctgatttttttttttctaaaacatcatagattactctatactattattagctcacatatcatggcgctgttagtgaaaatgcatttagtcattttatgccttgtactgttgagttctaagttcattacatgtatatttggcttctgagattatccaccaaagagcaactggtaatttgtgggtctatatcactcaatcgttaaagacccttttaattaaaattttccattaccaatccaacatgagggttgattattagtggctgcagtcacctacatttaggaattgcaataaaaagaaagagaagaaaatcgaataaaacgttaattggatatcatggttgtgttctgttccttaactgtatgtaccttcacttgttgacttgatcaactcaactacttttgtaaaggcgactgcaattgacagcataatcattcattccctgctgttctgtgtggtttcttacataagtttacgtaagatctcctgatataatggatcacatgaatttaaagattgatagaattcccgagaatgcttcatgggcaaatatggcacagtgtttctagcgattttcatgcgcatgacagctgagtattaggtaatttgacagatggtatttcttcctgtaggtcgtcaatttcctgacaaggcgattgatctgattgatgaggcttgctccaccgtaaggctgaagattgatagtcaaaaaggggtgaacaccacaggaatgcaaaataacaatggaaatacgtcagtgaatggagtgaacgaagcaattgttggcccagatcatgttgctcaagtaagcatgctacttgtatttgtataataattctgtttcgatcattcattctaatatcctaattatgttcaaatgttatatgaaggttgtgagccgatggactggcatcccggtcactacacttgatcaagaggagaaggagaagttaatccacctggcagacagattgcacgagcgagttgttggccaggatgaagctgtcaaactggttgcacaggcagttttacgttctagggcaggccttgaacaacctggccaacctataggctctttcctctttctgggctcaaccggtgttggaaagacggagcttgcaaaagcccttgctgagcagctatttgacagcgagaagatgttgatccgctttgacatgtctgaatttgttgggagtggatctgtgttgcgtctcattggagcacctccaaggttttgcatacccctgctcccttagtgaaactttacacattccatatttttcattattgacttgttttagtgctttcttggacatcttaaagctatcatggccatcaagatggcggacaattgacagaaaaagttaggacgcgtccttacagtgtcatcctttttgatgaggtggagaaggcagatccctcggtgttcaacgtgttccttcagctcctcgatgatggcatgttgactgatggcaaaggaaggacagtagatttcaagaacaccatcatcattatgacctcaaatctgggagctgagcacctaactgaaggagtgactggtgaaagaacaatggaagctgcacgggaccttgttatgaaacaagtttgttctagtcccgatctatcctgattttgaaatcctggactggctgcagtagcttctttctgattgttatatatactttgcacatgcaggttcagaagtatttcaggcctgaacttctcaacaggctgagtgagattgtgatatttgagccgctttcgcacgacaatcttaaggaggtcgtcaaaattcagatgaagagtgtcgttaccagtgtggctcacaagggcgtatctctacttgcaagtgatgatgccttggacgtcatcttgtctgaatcatacaacccagtaagtgcagattctttacaacatcatcacaagttcgctctaccattttgtaatgaccatgagatctttcagttcgtactaatatagttgaccatgcttccatctctttcagatgtatggggcaagaccagtaaggaggtgggtgcagaagaatgtgatgacaaagctctctgagatgcttattacaggagatgctggacaggggtcaactatttccattgacgctactgatgacaagaaggggctgaactttcaagtattgaaggaggaggtagtggttccgcgaggcaagaggccagtcgaggagcttcaaagcgactcggatagcgatgacgatgtgttcgagatcgcccccataccaaagaggaagaaaggtgattattagcatataggagcagcctgacaagtagctaggttgccacttttgggttatccatattatattagtgaattgcaacatggtagtatctcctttagcttgaacttatgccggttttagccagtgggcgttgtgtctgtgagaactcgcgactcatatggtaaggagggctgcttgcttgcttgcatcggctttcctccatgacgctgtaagagctgaatgagacgacctgatgtccttaatgcatgttactttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0537400, RefSeq:Os02g0537400