Os10g0416800

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Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0416800| Description = Similar to Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)| Version = NM_001071143.1 GI:115482029 GeneID:4...")
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Gene Name

Os10g0416800

Description

Similar to Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)

Version

NM_001071143.1 GI:115482029 GeneID:4348634

Length

1134 bp

Definition

Oryza sativa Japonica Group Os10g0416800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15059729..15060862

Sequence Coding Region

15059753..15060619

Expression

GEO Profiles:Os10g0416800

Genome Context

<gbrowseImage1> name=NC_008403:15059729..15060862 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15059729..15060862 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgaacgggtacctgttccgggagtacatcggcgcgcagttcaccggagtccgcttctccgacgtgcccatcaacccaaacctcagcttcaacttcatcctctccttcgccatcgactacacgagcccggccggcggcgccacgccggcgccgaccaacggcgtgttctcgccgtactgggacacggccaacctgtccccggccgacgtcgccgccgtcaaggcggcgcaccccaacgtcagcgtcatggtcggcctcggcggcgacagcgtgcaggacaccgccaaggtcttcttctccccgacctccgtcgactcgtgggtggccaacgccgtcgcctccgtctccggcatcatcgacgcctacggcctcgacggcgtcgacgtcgactacgagcacttcaacgacgacggcggcgccggcgtcgacacgttcgtggagtgcatcggccgcctcctcaccgagctcaaggcgcggcacccgaacatcaccacctccatcgcgccgttcgaggacgccgtggtgcagcgctactaccagccgctgtggcggcgctacgccggcgtgatcgacctcgtcaacttccagttctacggctacggcgacaacaccgacgtgccgacgtacgtgatgttctacgacgagcaggcggcgaactacccgggcggcaaggtgctcgccagcttcaagaccggcgacgtcgccgggctgctctggccggagcaggggatcgccggagcgaaggagttgcagcggcaggggaagctgccgggattgttcatctggtcggcggacagctcaaaggtcagcagctatggctttgagtacgagatcaaggctcaggagatcatcgccaaccactga</cdnaseq>

Protein Sequence

<aaseq>MTNGYLFREYIGAQFTGVRFSDVPINPNLSFNFILSFAIDYTSP AGGATPAPTNGVFSPYWDTANLSPADVAAVKAAHPNVSVMVGLGGDSVQDTAKVFFSP TSVDSWVANAVASVSGIIDAYGLDGVDVDYEHFNDDGGAGVDTFVECIGRLLTELKAR HPNITTSIAPFEDAVVQRYYQPLWRRYAGVIDLVNFQFYGYGDNTDVPTYVMFYDEQA ANYPGGKVLASFKTGDVAGLLWPEQGIAGAKELQRQGKLPGLFIWSADSSKVSSYGFE YEIKAQEIIANH</aaseq>

Gene Sequence

<dnaseqindica>25..891#aactcgagcaacaaggtcgtagccatgacgaacgggtacctgttccgggagtacatcggcgcgcagttcaccggagtccgcttctccgacgtgcccatcaacccaaacctcagcttcaacttcatcctctccttcgccatcgactacacgagcccggccggcggcgccacgccggcgccgaccaacggcgtgttctcgccgtactgggacacggccaacctgtccccggccgacgtcgccgccgtcaaggcggcgcaccccaacgtcagcgtcatggtcggcctcggcggcgacagcgtgcaggacaccgccaaggtcttcttctccccgacctccgtcgactcgtgggtggccaacgccgtcgcctccgtctccggcatcatcgacgcctacggcctcgacggcgtcgacgtcgactacgagcacttcaacgacgacggcggcgccggcgtcgacacgttcgtggagtgcatcggccgcctcctcaccgagctcaaggcgcggcacccgaacatcaccacctccatcgcgccgttcgaggacgccgtggtgcagcgctactaccagccgctgtggcggcgctacgccggcgtgatcgacctcgtcaacttccagttctacggctacggcgacaacaccgacgtgccgacgtacgtgatgttctacgacgagcaggcggcgaactacccgggcggcaaggtgctcgccagcttcaagaccggcgacgtcgccgggctgctctggccggagcaggggatcgccggagcgaaggagttgcagcggcaggggaagctgccgggattgttcatctggtcggcggacagctcaaaggtcagcagctatggctttgagtacgagatcaaggctcaggagatcatcgccaaccactgatcgctgatcggacggtcgagatatcgctgtggttggatttggtatgaatgaatgactgaataagcggatatatttgcccagtacagttctgggcacgcatggtgttctaatacttattgcgtatatatgcagtgagatggatattatatatatctacagaatataaataagtttcttcaacatatatgctatttctccaatctatgaattagtgacagacatatatctgtttcgagttcactt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0416800, RefSeq:Os10g0416800