Os02g0538700

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Revision as of 02:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0538700| Description = Harpin-induced 1 domain containing protein| Version = NM_001053589.1 GI:115446548 GeneID:4329582| Length = 1076 bp| ...")
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Gene Name

Os02g0538700

Description

Harpin-induced 1 domain containing protein

Version

NM_001053589.1 GI:115446548 GeneID:4329582

Length

1076 bp

Definition

Oryza sativa Japonica Group Os02g0538700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20812441..20813516

Sequence Coding Region

20812698..20813372

Expression

GEO Profiles:Os02g0538700

Genome Context

<gbrowseImage1> name=NC_008395:20812441..20813516 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20812441..20813516 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcaaggagaagcaccacaagcgggagcaccacctccggcgatgctgcggcgggatggcggcgtgcatcctggcgctggtcctcgtcgtcggcttcatcgcgctcgtcgtctacctcgcgctccgcccctccaagccgtccttctacctgcaggacctccagctccgctccgtcgacctcggcgacccctccctctccgccaccgcgcaggtcaccctcgcctcccgcaaccccaatgaccacgtcggcgtccactaccgccgcctcgacgtcttcgtcacctaccgcgacgaacccgtcacggtgcccgtctccctcccgccgacctaccagggccaccgcgacgtcaccatctggtcgcccgtgctctccggcgagtccgtccccgtggcgggcttcgtcgccgacgcgctcaggcaggacgtcgccgccgggtacgtcgcgctgcaggtgaaggtcgacggccgcgtcaagtggaaggtcggcagctgggtctccggcagctaccacctctttgtcagctgccccgccatgctcgcctccgccggaccaggcggcgtcggccccatgcctctcggcggcgcctccgccgccgtcgtgaacggcaccggcgccggcgccgtcgcgtcgctcaggttcacgcagccgacagggtgcagcgtcgaggtgtga</cdnaseq>

Protein Sequence

<aaseq>MSKEKHHKREHHLRRCCGGMAACILALVLVVGFIALVVYLALRP SKPSFYLQDLQLRSVDLGDPSLSATAQVTLASRNPNDHVGVHYRRLDVFVTYRDEPVT VPVSLPPTYQGHRDVTIWSPVLSGESVPVAGFVADALRQDVAAGYVALQVKVDGRVKW KVGSWVSGSYHLFVSCPAMLASAGPGGVGPMPLGGASAAVVNGTGAGAVASLRFTQPT GCSVEV</aaseq>

Gene Sequence

<dnaseqindica>145..819#cattattactctcttactcgctttcatatctaacgcccctctctctctctctctctcactcagcaacagctcgcagctcactctctcactctactactcgtagctaagctagctcgcgccgccgccgccgccgtcgccgccgccatgagcaaggagaagcaccacaagcgggagcaccacctccggcgatgctgcggcgggatggcggcgtgcatcctggcgctggtcctcgtcgtcggcttcatcgcgctcgtcgtctacctcgcgctccgcccctccaagccgtccttctacctgcaggacctccagctccgctccgtcgacctcggcgacccctccctctccgccaccgcgcaggtcaccctcgcctcccgcaaccccaatgaccacgtcggcgtccactaccgccgcctcgacgtcttcgtcacctaccgcgacgaacccgtcacggtgcccgtctccctcccgccgacctaccagggccaccgcgacgtcaccatctggtcgcccgtgctctccggcgagtccgtccccgtggcgggcttcgtcgccgacgcgctcaggcaggacgtcgccgccgggtacgtcgcgctgcaggtgaaggtcgacggccgcgtcaagtggaaggtcggcagctgggtctccggcagctaccacctctttgtcagctgccccgccatgctcgcctccgccggaccaggcggcgtcggccccatgcctctcggcggcgcctccgccgccgtcgtgaacggcaccggcgccggcgccgtcgcgtcgctcaggttcacgcagccgacagggtgcagcgtcgaggtgtgagtcacaaatttgagtagcggctagtggcaatatggtaattaattaagttcatcggtcgcgttaatccgcaagctgttaattttttttttgtgttcatgtagctcatgcatactctatgtgagagaataaagttacgtacgttcatatgtataccattgcaacacattaatttcctatatgaagtgtactagtataatttcgttgctgtaatttttgaattattgttaataatatatattcaggtaatatttctcgag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0538700, RefSeq:Os02g0538700