Os02g0539200

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Revision as of 02:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0539200| Description = U box domain containing protein| Version = NM_001053592.1 GI:115446554 GeneID:4329585| Length = 1643 bp| Definition...")
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Gene Name

Os02g0539200

Description

U box domain containing protein

Version

NM_001053592.1 GI:115446554 GeneID:4329585

Length

1643 bp

Definition

Oryza sativa Japonica Group Os02g0539200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20839396..20841038

Sequence Coding Region

20839609..20840937

Expression

GEO Profiles:Os02g0539200

Genome Context

<gbrowseImage1> name=NC_008395:20839396..20841038 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20839396..20841038 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaggcggcggcggaggtgccgtcctacttcctgtgcccgatctcgctggagatcatgagggacccggtgacgctggcgacggggatcacctacgaccggagcagcatcgagcggtggatgttcggcggcggcggcggcgacggggggaaggggacgtgcccggtgacgcggcggcagctggcgccggcggagcgggaggcgacgcccaaccacacgctgcggcggctcatccaggcgtggtgcgccgcgcacgccgtcgagaggttccccaccccgcgcccgcccgtcgactcctgccgcgtcgccgcgctcgtcgacgaggggacgacgacgatgctcggcggcggcggcaggcagcggcagctcgccgcgctccgggagatcaaggccatcgccgccgagagcgaccgcaacaagcgctgcgtcgaggccacgcccggcgccgtcgagttcctcgtctccgtcgtcgtccagagccatgccgccgcctccacctcagccagctcggacgacgacgacctgttcgactcggtgatcgattcccccatgtcgacgagctcgccggaggaggaggccctgggcgtgctctactccctcaagccgtccgagcccaccctgcgccgcgtcctcggcaaggacaatggcgtcggcttcctcgacaccctcgcctccgtgctccgccgcccgagctaccgttcgcgcgcgtatgccatcctcctcctgaaggcggtgacgtcggcgatgccgccggagcggctgatggcggtgagccccgagctggtggaggaggtggtccgggtggtgtccgacggcgtgtcgtcgaaggcggtgaaggcggcgctgcacgtgctgtgccggctgtgcccgtgggggcggaaccgcgtgaaggcggtggaggccggcgcggtggcggcgctggtggagctcctcctcgacgaggagggcggcggcgggcggcggcgcgcggcggagctggcggtggtggcgatcgaccacctgtgcgggtgcgcggaggggaggtcggagctggtggcgcacccggcggggctcgccgtggtgtccaagagggcgatgcgggtgtcgccggcggccaccgagagcgccgtgcgcgcgctccacgccgtcgcgaggaacgcggcgacgccggccgtgctgcaggagatgctcgccgtcggcgtggtggcgaagctgctgctggtgctgcaggcggacggcggcgagcgcgccagggcgagggcgagggagatgctcagggcgaacgctagggtttggaaggactcgccatgcttgcaagctcaccttaaggcttcttacccctcctga</cdnaseq>

Protein Sequence

<aaseq>MEEAAAEVPSYFLCPISLEIMRDPVTLATGITYDRSSIERWMFG GGGGDGGKGTCPVTRRQLAPAEREATPNHTLRRLIQAWCAAHAVERFPTPRPPVDSCR VAALVDEGTTTMLGGGGRQRQLAALREIKAIAAESDRNKRCVEATPGAVEFLVSVVVQ SHAAASTSASSDDDDLFDSVIDSPMSTSSPEEEALGVLYSLKPSEPTLRRVLGKDNGV GFLDTLASVLRRPSYRSRAYAILLLKAVTSAMPPERLMAVSPELVEEVVRVVSDGVSS KAVKAALHVLCRLCPWGRNRVKAVEAGAVAALVELLLDEEGGGGRRRAAELAVVAIDH LCGCAEGRSELVAHPAGLAVVSKRAMRVSPAATESAVRALHAVARNAATPAVLQEMLA VGVVAKLLLVLQADGGERARARAREMLRANARVWKDSPCLQAHLKASYPS</aaseq>

Gene Sequence

<dnaseqindica>102..1430#cattcccttcaactcaaactcctcttcttcttcttcctcccatcgatctctctccttcgcgatcaactcgagctcgaactcgtctcgtggtagtagcgagcatggaggaggcggcggcggaggtgccgtcctacttcctgtgcccgatctcgctggagatcatgagggacccggtgacgctggcgacggggatcacctacgaccggagcagcatcgagcggtggatgttcggcggcggcggcggcgacggggggaaggggacgtgcccggtgacgcggcggcagctggcgccggcggagcgggaggcgacgcccaaccacacgctgcggcggctcatccaggcgtggtgcgccgcgcacgccgtcgagaggttccccaccccgcgcccgcccgtcgactcctgccgcgtcgccgcgctcgtcgacgaggggacgacgacgatgctcggcggcggcggcaggcagcggcagctcgccgcgctccgggagatcaaggccatcgccgccgagagcgaccgcaacaagcgctgcgtcgaggccacgcccggcgccgtcgagttcctcgtctccgtcgtcgtccagagccatgccgccgcctccacctcagccagctcggacgacgacgacctgttcgactcggtgatcgattcccccatgtcgacgagctcgccggaggaggaggccctgggcgtgctctactccctcaagccgtccgagcccaccctgcgccgcgtcctcggcaaggacaatggcgtcggcttcctcgacaccctcgcctccgtgctccgccgcccgagctaccgttcgcgcgcgtatgccatcctcctcctgaaggcggtgacgtcggcgatgccgccggagcggctgatggcggtgagccccgagctggtggaggaggtggtccgggtggtgtccgacggcgtgtcgtcgaaggcggtgaaggcggcgctgcacgtgctgtgccggctgtgcccgtgggggcggaaccgcgtgaaggcggtggaggccggcgcggtggcggcgctggtggagctcctcctcgacgaggagggcggcggcgggcggcggcgcgcggcggagctggcggtggtggcgatcgaccacctgtgcgggtgcgcggaggggaggtcggagctggtggcgcacccggcggggctcgccgtggtgtccaagagggcgatgcgggtgtcgccggcggccaccgagagcgccgtgcgcgcgctccacgccgtcgcgaggaacgcggcgacgccggccgtgctgcaggagatgctcgccgtcggcgtggtggcgaagctgctgctggtgctgcaggcggacggcggcgagcgcgccagggcgagggcgagggagatgctcagggcgaacgctagggtttggaaggactcgccatgcttgcaagctcaccttaaggcttcttacccctcctgatcatttcatcaccatcacatccatccaccgatctattaattattattaattgctaagaggagcacatgctttaatttgcactcctcttagtagttaattagattttgtgattacttttagttctttaatttgtttatgatctgaatgtacaaaatacactgtaaatctttcattaattctgtacaaaaatacactataaatctttcattgcct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0539200, RefSeq:Os02g0539200