Os02g0539900

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Revision as of 02:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0539900| Description = WD40-like domain containing protein| Version = NM_001053594.1 GI:115446558 GeneID:4329588| Length = 3423 bp| Defini...")
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Gene Name

Os02g0539900

Description

WD40-like domain containing protein

Version

NM_001053594.1 GI:115446558 GeneID:4329588

Length

3423 bp

Definition

Oryza sativa Japonica Group Os02g0539900, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20884501..20887923

Sequence Coding Region

20884501..20884973,20885608..20885701,20885811..20885902,20886028..20886079,20886189..20886346
,20886658..20886748,20886865..20887923

Expression

GEO Profiles:Os02g0539900

Genome Context

<gbrowseImage1> name=NC_008395:20884501..20887923 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20884501..20887923 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaagatcagactattccgatgatggagaagacgacgtcttcttcgacgcgtttgacgatgacgacgacgacgacgacgataagaacagaagctcaacggagattagtacaagtgaagctgggtacgagctgtgggcaggtgagccgatgagtgtcagagaaaggagacacagattcctgaaaggaatggggtttcttgagcccggtcctaccgggacggccttcccccagtggctggcagaaatcgcaacaacggattgctgctcatttcacgatttcgaggagaggatcagtagcatctgctcttccttccgttcttgcttctctgacagtattttggcagcaacagacaatactaatgatagtgctgataactgcacaagggatgtggattataacagtagtggaaggagaagcacaacatctcatgatcaaggccagcacgatgtcctctcggagattgttgaggaggctggaacatcatctgatgaaatggtgactccaaatgcgcctgagattgtgcctggattctctaaactaatgcgaaaactactgcgcattcgcttcggtcacggccctaagagaaacgaattcaagagcttgtgggaaatcttcatgaggaagaaggtttcagatagagtactttccatggatgatgtacatgtccaaccaagaggattgaactcaggcacattgtacaggacaaaagttcatcagcagaacaagaagtggatggacttcactgccgtctacatgtgccaggagatccaggcacacgagggattgatcagggtgatgaagttcagttcatccgggtggcatctagccagtggcggcgaggattgcgtcgtgcgcgtttggcagatcacagaggttgaatcttcgcctgatttgtacggcagagatgttcctgaagacatgaacaagaagaaggacgtgaaaattaagcccctcgcgatcataccaaagaaggttttcagtatcacagagacacctctgcatgagtttcaaggccatacaagtgatgtcctggatttggcatggtcaaagtcagattttctcttgagttcatcgaaagacacgacaatacgcatgtggaaagttggctgttatgactgccttgcagtattcagacatggagattatgttacatgtgttcaattcaatccagttgatgaaaggtacttcatcagtggctcaatagatggcaaagttcgtgtttgggatgtttcagacaagcgagtagttgattgggatgacacaaaatacatcataacagctataagtcaccgaccagatggaaagggtttcgttgtcggttctgtcaaagggagatgccgcttctatgatcaatctggtcttttcccattaggtcgaaacattgaaaggaacaaactgatgcgcataaagcggagacggtgtgctgccaacaagattaccaatattcagttctctcagggccatccatctaggatgataatcacatcgaaagatcacaaaatccgagtctctgaaggtcataagatcacccaaaagtttcaaggacaatggaggtccaaggtgttggtgcctccgtcgctgacgcccgacggcaggtacctgatatcggcggggagggactccaagatccgcatctggaacttcgacggcggcggcaggcggcggagggtggtgagctcgcgcgagctcttcttctccgagggcgtcacggcggtggcgccgtgggcgagggcgatgggcggcggcggcggcggagcggacgcgccgacgctgtgctacgaccgggagcggtgctcgttcggcacgtggttcgtcgtgcccgacggggcggcggcggcggcggctacgacgtggccggaggagaggctgctgccgtcgctgaggtacgtgaactgcgccgggatggacgactgccggtcccaggttccggcggcgtggaacatggtggtggtgaccggcagccgcggcggcgccatcagggccttccacaactacggcctgccggtcaggctgtag</cdnaseq>

Protein Sequence

<aaseq>MPRSDYSDDGEDDVFFDAFDDDDDDDDDKNRSSTEISTSEAGYE LWAGEPMSVRERRHRFLKGMGFLEPGPTGTAFPQWLAEIATTDCCSFHDFEERISSIC SSFRSCFSDSILAATDNTNDSADNCTRDVDYNSSGRRSTTSHDQGQHDVLSEIVEEAG TSSDEMVTPNAPEIVPGFSKLMRKLLRIRFGHGPKRNEFKSLWEIFMRKKVSDRVLSM DDVHVQPRGLNSGTLYRTKVHQQNKKWMDFTAVYMCQEIQAHEGLIRVMKFSSSGWHL ASGGEDCVVRVWQITEVESSPDLYGRDVPEDMNKKKDVKIKPLAIIPKKVFSITETPL HEFQGHTSDVLDLAWSKSDFLLSSSKDTTIRMWKVGCYDCLAVFRHGDYVTCVQFNPV DERYFISGSIDGKVRVWDVSDKRVVDWDDTKYIITAISHRPDGKGFVVGSVKGRCRFY DQSGLFPLGRNIERNKLMRIKRRRCAANKITNIQFSQGHPSRMIITSKDHKIRVSEGH KITQKFQGQWRSKVLVPPSLTPDGRYLISAGRDSKIRIWNFDGGGRRRRVVSSRELFF SEGVTAVAPWARAMGGGGGGADAPTLCYDRERCSFGTWFVVPDGAAAAAATTWPEERL LPSLRYVNCAGMDDCRSQVPAAWNMVVVTGSRGGAIRAFHNYGLPVRL</aaseq>

Gene Sequence

<dnaseqindica>2951..3423#2223..2316#2022..2113#1845..1896#1578..1735#1176..1266#1..1059#atgccaagatcagactattccgatgatggagaagacgacgtcttcttcgacgcgtttgacgatgacgacgacgacgacgacgataagaacagaagctcaacggagattagtacaagtgaagctgggtacgagctgtgggcaggtgagccgatgagtgtcagagaaaggagacacagattcctgaaaggaatggggtttcttgagcccggtcctaccgggacggccttcccccagtggctggcagaaatcgcaacaacggattgctgctcatttcacgatttcgaggagaggatcagtagcatctgctcttccttccgttcttgcttctctgacagtattttggcagcaacagacaatactaatgatagtgctgataactgcacaagggatgtggattataacagtagtggaaggagaagcacaacatctcatgatcaaggccagcacgatgtcctctcggagattgttgaggaggctggaacatcatctgatgaaatggtgactccaaatgcgcctgagattgtgcctggattctctaaactaatgcgaaaactactgcgcattcgcttcggtcacggccctaagagaaacgaattcaagagcttgtgggaaatcttcatgaggaagaaggtttcagatagagtactttccatggatgatgtacatgtccaaccaagaggattgaactcaggcacattgtacaggacaaaagttcatcagcagaacaagaagtggatggacttcactgccgtctacatgtgccaggagatccaggcacacgagggattgatcagggtgatgaagttcagttcatccgggtggcatctagccagtggcggcgaggattgcgtcgtgcgcgtttggcagatcacagaggttgaatcttcgcctgatttgtacggcagagatgttcctgaagacatgaacaagaagaaggacgtgaaaattaagcccctcgcgatcataccaaagaaggttttcagtatcacagagacacctctgcatgagtttcaaggccatacaagtgatgtcctggatttggcatggtcaaagtcagatgtaagtcttctgtctcatgtagtttggatatttaaatgattgaagtgtattttttttgtgagaagtgtaatgttaaatttggtatgaactgatctagtagtatatacctcctgcagtttctcttgagttcatcgaaagacacgacaatacgcatgtggaaagttggctgttatgactgccttgcagtattcagacatggagattatggtatgtgcaaacatcccatagcagttaactatggtgatggaaatatcaaacaggctttgtgcttaagcgtttttattcaaagctcaaattctgggaacgtgttattttgctagcattctttattttaaactggaaatacttctttgtaataatgaatggtttagtccatggcttatgaagaggccggaataaatatattccttttcctaaaaaagttaattgcccacaaaatattttttcctaatttttctttccttatgtagtagattcaacttaatgatgttgacctgatattcttttcttgtcaacagttacatgtgttcaattcaatccagttgatgaaaggtacttcatcagtggctcaatagatggcaaagttcgtgtttgggatgtttcagacaagcgagtagttgattgggatgacacaaaatacatcataacagctataagtcaccgaccagatggaaaggttcatgctttatcaaaatgctatttttttcaaaaattgattatcaaaatgtcattgaattttatttcccagtaactagctgctgattcttgcattttacccttgtcagggtttcgttgtcggttctgtcaaagggagatgccgcttctatgatcaatctggtatatatgactgcattttatttttatttttctgatccttcagatatttctcattttaaggacaaggagggaataatgttgttattaactaagcattgtacattattatttttctttcccaataggtcttttcccattaggtcgaaacattgaaaggaacaaactgatgcgcataaagcggagacggtgtgctgccaacaagattaccaatattcaggttagttgcttaaatttttttttcatcccatgcatatatatatagtttatgattttagcctgctacacgaataccggccaattgattattattgtcatctctcatgcagttctctcagggccatccatctaggatgataatcacatcgaaagatcacaaaatccgagtctctgaaggtcataagatcacccaaaagtttcaaggtataaaagacttcatttcagtctctttcaccattctattgtatgaaaacaaatctcctcaaaatttcataagcggttttcacttgatatatataggccctgtttgagggagctttaaattttgagaagcagctgtttggtagccagcttatgagaatctggaaaagctctgaaacccagcttctccagcttctggcttcttagttcattttttagaatctgtaactacaaattctcagaagctgtggactgtttagggcagcttatagcagaagcagctgggagaagctcccccaaacagggccatagtactccatccgtttgagtttcagattataagtcgttttgattttggtcaaagtcaaattactttaagtttgtcctagtttagagacaaatataataataatatttacaacaccaaattagtttcactaaatctataattgaatatattttcataatatatttttacgtttggttgaaagtattactattttttctacaaacttaatcaaacttggggcagtttaaccttgagcaaaatcaaagtgacttataatctagaacagggagagtatatgtcatcatgttttggaatattcaaaaaatcaagcatttattatatttccaggacaatggaggtccaaggtgttggtgcctccgtcgctgacgcccgacggcaggtacctgatatcggcggggagggactccaagatccgcatctggaacttcgacggcggcggcaggcggcggagggtggtgagctcgcgcgagctcttcttctccgagggcgtcacggcggtggcgccgtgggcgagggcgatgggcggcggcggcggcggagcggacgcgccgacgctgtgctacgaccgggagcggtgctcgttcggcacgtggttcgtcgtgcccgacggggcggcggcggcggcggctacgacgtggccggaggagaggctgctgccgtcgctgaggtacgtgaactgcgccgggatggacgactgccggtcccaggttccggcggcgtggaacatggtggtggtgaccggcagccgcggcggcgccatcagggccttccacaactacggcctgccggtcaggctgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0539900, RefSeq:Os02g0539900

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os02g0539900&oldid=22719"