Os02g0543100

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Revision as of 02:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0543100| Description = Conserved hypothetical protein| Version = NM_001053607.2 GI:297599388 GeneID:4329602| Length = 4130 bp| Definition ...")
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Gene Name

Os02g0543100

Description

Conserved hypothetical protein

Version

NM_001053607.2 GI:297599388 GeneID:4329602

Length

4130 bp

Definition

Oryza sativa Japonica Group Os02g0543100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21026161..21030290

Sequence Coding Region

21026161..21026283,21026990..21027071,21027528..21027847,21028342..21028535,21028621..21029015
,21029935..21030290

Expression

GEO Profiles:Os02g0543100

Genome Context

<gbrowseImage1> name=NC_008395:21026161..21030290 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21026161..21030290 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgaagcccaaggcaaagaggcccacgccgccacgggctcaccggcgatccaccgccgcgggcgcgggcgcgggcgggctgggcctggcggccgcggcgtacgtgggcgtggactacgcgcgccgccacctgccgccggcgtggtggcggtggcacggccggctgcagccggcgctctggggggcgctggcgctggccgccgccgcgcgcgcgcccttctaccgccggtgggacgccgagctccgcgccgcgccgcggttcctcgccgccatggcgctcatgctcgccgcgttcctctgcgaggccgtctccgtccgcttcgtctccaccgtcctcggcctccattggcaccgatctacagctcctcttcccgacactgggcagtggctgcttctagcattgaatgagaaacttccgcaaattgtggttgatctcctcagagcacccatcatcagtcttcatcactatctgatgttgtttatcatgctggggttttcagctctgtttgactgcatcaaaggccctggacttggcatagctgcaagatatatgttcacaatggcagttggacgttcgctgcggactgtaacatttcttgctacgattctaccatccgcgaggccttggtgtgctgaagctcgatatcaaatacctgatcatcctcatccttgggcacagaaatactatgctccatatgcctctgatccagatgcgatccgtagggtcatacaagaggatatgccatatgctttcgttaaagagtaccctcgtgagtatagacctaagtggggacatatgagcttcttagtagacattttgaggccaactgttgaagaggggtcctcatggtatcattttctgaagaaggcaagtggtggctgcagtgatcttatgtatagtggccacatgcttgttgctgtcctcaccgctatggcatggacggaagcatatgggggatggatctctgttgttatatggtttcttgtcctccacagcgctcagagggagatacgggagcgccatcattacagtgttgattgcatcgtggcaatctacgtcggaatcctcttgtggaggatgactggtttcatttggtctgcgatagacaacagtcatgccagaaggcttgcaaagctcgacaaggttcagaacagactatttcaggctgcaaaagattcagacatggatgaaataaggggtctgctgaacgaagttgagctggctggccaagagaggaagggcttctcgcagcgtgtcatctttccaaagaaatggttcttcccatggcagcctgagctggaacatggaaatggaccaatgactccacgagaatgtggcccgcttggcaagaaaattcttgtgtacaaatcagattgcgtataccgtgttttacatagacggttctgtggttttgcatcgttcccgcggttacttccagcactgagcgcttccaaatcagcgctctga</cdnaseq>

Protein Sequence

<aaseq>MPKPKAKRPTPPRAHRRSTAAGAGAGGLGLAAAAYVGVDYARRH LPPAWWRWHGRLQPALWGALALAAAARAPFYRRWDAELRAAPRFLAAMALMLAAFLCE AVSVRFVSTVLGLHWHRSTAPLPDTGQWLLLALNEKLPQIVVDLLRAPIISLHHYLML FIMLGFSALFDCIKGPGLGIAARYMFTMAVGRSLRTVTFLATILPSARPWCAEARYQI PDHPHPWAQKYYAPYASDPDAIRRVIQEDMPYAFVKEYPREYRPKWGHMSFLVDILRP TVEEGSSWYHFLKKASGGCSDLMYSGHMLVAVLTAMAWTEAYGGWISVVIWFLVLHSA QREIRERHHYSVDCIVAIYVGILLWRMTGFIWSAIDNSHARRLAKLDKVQNRLFQAAK DSDMDEIRGLLNEVELAGQERKGFSQRVIFPKKWFFPWQPELEHGNGPMTPRECGPLG KKILVYKSDCVYRVLHRRFCGFASFPRLLPALSASKSAL</aaseq>

Gene Sequence

<dnaseqindica>4008..4130#3220..3301#2444..2763#1756..1949#1276..1670#1..356#atgccgaagcccaaggcaaagaggcccacgccgccacgggctcaccggcgatccaccgccgcgggcgcgggcgcgggcgggctgggcctggcggccgcggcgtacgtgggcgtggactacgcgcgccgccacctgccgccggcgtggtggcggtggcacggccggctgcagccggcgctctggggggcgctggcgctggccgccgccgcgcgcgcgcccttctaccgccggtgggacgccgagctccgcgccgcgccgcggttcctcgccgccatggcgctcatgctcgccgcgttcctctgcgaggccgtctccgtccgcttcgtctccaccgtcctcggcctccattggcaccggtcagtcccttcttcttctagccggccgcagcgaaatcagcgagggtttctttttttggggggtttcgggtaaaaatgtcgggggcttggtgacatcgtttgttcgcgttcttgcgctaatcatcgtggagcctgtggatcgcggttgttgtgattaggatttttcgaagaaggatgctcttgcagcggttactcgtagcaatgtgtaaaactgagcattgattaactgtggttcaaatgcttgatttggttacccgccaatcaaaaccatttcggtgaattgcttgctggtaggattgggttttgctttcgtttatattttatttatcagatgatttgcaagacaggtactttttacctctggtaacggattggtgtgagaactgagaactgtagataagacatcaattgtttctgaaatctaacaattgtgggttagtgcatttctattagttcgtgaagattaagaatctgttcttagttcttgctcacactttatttggatgattaactcaagtccacaatgcttggaaactttttaaggatcctagtggtgctttggataggaaatagaatggttcctttagggggaaaacacagaaatctattaactgtttatgtgcatttatgcaacattttgttccatatataacctttttcgccttgttagttaaatatgtagtgaggttagcaccttcacttttttttttccattaatggtatgttttttactccacccatgaaattgaactaccactagaagatattactagtagtgaggcagtgacaactttttgtcctgaccaacttcctccctttgtgcttatgcttatttgactgcactgtttattctgcacttttgtgccataaaaatcttaacaagagataaactaagactggtccatttttttctccacagatctacagctcctcttcccgacactgggcagtggctgcttctagcattgaatgagaaacttccgcaaattgtggttgatctcctcagagcacccatcatcagtcttcatcactatctgatgttgtttatcatgctggggttttcagctctgtttgactgcatcaaaggccctggacttggcatagctgcaagatatatgttcacaatggcagttggacgttcgctgcggactgtaacatttcttgctacgattctaccatccgcgaggccttggtgtgctgaagctcgatatcaaatacctgatcatcctcatccttgggcacagaaatactatgctccatatgcctctgatccagatgcgatccgtagggtcatacaagaggatatgccatatggtcagcacatccaacttataacccttactgatatggcttcttttattggcctgcagtagctaatgttcttccttcctaattatagctttcgttaaagagtaccctcgtgagtatagacctaagtggggacatatgagcttcttagtagacattttgaggccaactgttgaagaggggtcctcatggtatcattttctgaagaaggcaagtggtggctgcagtgatcttatgtatagtggccacatgcttgttgctgtcctcaccgctatggcatggacggtaagctatggctattttgtcttccagattgtcacaagtcacgaccaagatgcattcatttattctccttatgccctgctaaaaccaaaacggaattaactggctgcacgttaaatcgaaagaatgttatacactcatcaagccatccttgctatatgttcttttaaaaaatgcacatggttatgcctgcttttatagtttcatggcctgtgtcaatgcatcattaattggatttatttctttgcaagtgacatcatgaaccagttttaagcattccctaacatgctctgtgataattattgttaaatcaatcaagcactacatttatgtgacagctaggactcttgcggtgaagagttcagtttacccttgtctattttcttttcgtaggcatggcccttcctcctgatgataactccatcttgattaatttctgtgttgggctgttacttactgttcaattatcataatagatcctttttccatcgtcacaggaagcatatgggggatggatctctgttgttatatggtttcttgtcctccacagcgctcagagggagatacgggagcgccatcattacagtgttgattgcatcgtggcaatctacgtcggaatcctcttgtggaggatgactggtttcatttggtctgcgatagacaacagtcatgccagaaggcttgcaaagctcgacaaggttcagaacagactatttcaggctgcaaaagattcagacatggatgaaataaggggtctgctgaacgaagttgagctggctggccaagagaggaagggcttctcgcagcgtgtcatcttgtctttctcctctgctatgatagttttcaccctctcatgtgttctcctagcattcacactaaccagcgatggatgatttcttcgcaggcttcatactttcagtttcatattggcagattgagttttacttttacatgatcccagctctagattttttttgtagtgtaggttgagagattacgttgatgctacttacctagtagttgaattagcagtgaaacttgtttcaggggtgctctctcttggcactaaatttttgttgatatctgtagcaaacaaaatctagatacttgtgaggaaaataaggattatctcctgtgttacagttgttgagaagccctttgctaatgagatgagatggttatgacgataatggtggtggatgtgttagagaattagtgatgggaaaccatgtgaaccattgatgcaataatgcattttaatttgttttttcagtccaaagaaatggttcttcccatggcagcctgagctggaacatggaaatggaccaatgactccacgagaatgtggcccgcttgtcaccaaaatcatctaaaaatatgatttggaaatatatgctatattctagacttagtcaagctaagctggaaattttatttctagactcttattaagctggagatgtctctgtcaattgatcgtaatttggtttgaaagtcagctcatttctacatcgtcagacaagtattaattgtagtgcttctggtgatgaattttgtgaaccattttgaaggaaaaggaaagggataagttgcagttaacttgtaaattgccagactgatacacatattatctatgcgcgcgggagatgatttcatacatatatacgagagtattttacaactgaaaaatgtcaagtttcagatatatttactgtgagttgttgttatctattgatcgtaatacaggcagaaactagtggagttttcttttggacaattaatccccggacgtgcgcaaggcgtgcattcagacccttgacagcgcctcaaagtgaaaacgaaaaccagggaagggatggacaaatgatatctactactccctctgaatccaaatgtaagttactttagccttctcaattctttcctagatgtaaaatgtaaatcttgtttaaactctttctttaatcttttcttgtatatttgcttttgccaaataaatgttatcctcctcacaaatacaccgttcttcttttctaatatagtcaattcgatcaaataaagggcaagaaaattcttgtgtacaaatcagattgcgtataccgtgttttacatagacggttctgtggttttgcatcgttcccgcggttacttccagcactgagcgcttccaaatcagcgctctga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0543100, RefSeq:Os02g0543100