Os02g0543400

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Revision as of 02:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0543400| Description = WD40-like domain containing protein| Version = NM_001053610.1 GI:115446590 GeneID:4329605| Length = 3924 bp| Defini...")
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Gene Name

Os02g0543400

Description

WD40-like domain containing protein

Version

NM_001053610.1 GI:115446590 GeneID:4329605

Length

3924 bp

Definition

Oryza sativa Japonica Group Os02g0543400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21040075..21043998

Sequence Coding Region

21040142..21040359,21040477..21040579,21041126..21041233,21041350..21041459,21041638..21041745
,21042924..21042969,21043160..21043291,21043420..21043500

Expression

GEO Profiles:Os02g0543400

Genome Context

<gbrowseImage1> name=NC_008395:21040075..21043998 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21040075..21043998 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcggcgcggctgccgcggacggaggccagggtgctgtcggggcacgagggggcggtgctggcggtgcgattcaatcgggacgggaactactgcctgagctgcggcaaggaccggatcatccgcctctggaacccccacaccggcgccctcgtcaagccctacaagtcccacggccgcgaggtccgcgacgtgaactcctcctcggacaatgccaagctggtgtcgtgcggcggggacaggcaggtcttctactgggatgtcgcatctgcccgtgtcatccgcaagttccgcggccacaacagcgagatcaattcagtgaagtttaatgagtttaacacagttgtagtctcagctggctatgatcgcacagtgcgtgcatttgattgcagatcacagagcagtgaccctattcagacaattgatacttttcaagatagtgtaatgtcagttaatttaaccaacacagaaataattgctggcagtgttgatggtactatccgcacatttgacattcgcatgggtagggagactgtcgacaacttggggcatcctgtcaactgtatatctttgtcaaatgaccgcaattgcctattagctaattgtttggattctactgtgaggcttctagacaagtccactggggaactgttacaagagtacaaagggcatatatgcaagtccttcaagatggattgctgcctaaccaacgatgatgcatttgttgttggtggatccgaggatggttacattttcttctgggagttagtggatgcacctgttgtttcaagctttcgagctcatagttctgtggtcactagcgtcagttatcacccaacaagggcttgcatgctaacttcatctgttgatggcaccattcgtgtttggacctaa</cdnaseq>

Protein Sequence

<aaseq>MAAAAAARLPRTEARVLSGHEGAVLAVRFNRDGNYCLSCGKDRI IRLWNPHTGALVKPYKSHGREVRDVNSSSDNAKLVSCGGDRQVFYWDVASARVIRKFR GHNSEINSVKFNEFNTVVVSAGYDRTVRAFDCRSQSSDPIQTIDTFQDSVMSVNLTNT EIIAGSVDGTIRTFDIRMGRETVDNLGHPVNCISLSNDRNCLLANCLDSTVRLLDKST GELLQEYKGHICKSFKMDCCLTNDDAFVVGGSEDGYIFFWELVDAPVVSSFRAHSSVV TSVSYHPTRACMLTSSVDGTIRVWT</aaseq>

Gene Sequence

<dnaseqindica>68..285#403..505#1052..1159#1276..1385#1564..1671#2850..2895#3086..3217#3346..3426#aaaaagaaaaaaaagaaacctagttcgtcaccgtcaccgacgccgggaaggaggaggaagcggggagatggcggcggcggcggcggcgcggctgccgcggacggaggccagggtgctgtcggggcacgagggggcggtgctggcggtgcgattcaatcgggacgggaactactgcctgagctgcggcaaggaccggatcatccgcctctggaacccccacaccggcgccctcgtcaagccctacaagtcccacggccgcgaggtccgcgacgtgaactcctcctcgtaagccacttcgcttcctcttcctcgctgcgattccgtccccccaacaccaacttcccctgtctgatttggaggagctgagcaccagtggggaatttgaggatcctttgcttgcagggacaatgccaagctggtgtcgtgcggcggggacaggcaggtcttctactgggatgtcgcatctgcccgtgtcatccgcaagttccgcggccacaacagcgaggtatggaccccaattctcactgtgatgatgaccgcgctgttgtaattgtttggtgatcgcggttggattgagcaagtgagaagtgctcatgaaaaattgtactattaagcagtttcagcaccatactatcagtgtgttaagcgccgctgctatttcaatactagtattgattttatctatacagagagagcacggttgtttatgataggattagcagtagcctgagattgtagtggaatagagcagttggcactgtttataatcaaacaacgtctgttccattgtgctatgtggagaacaccacgaaatcagcactctagcattatcgatctagtcacaactagtcaattgcagggtgaattgtgtgaaaatgagtgtgctgtaatgatacctctgtaatggtgttgttgtacttccttttaaatctagcactgcacatcgtcaatatgattattgggatactgaaaacagatcaagaacaacctcggtgacaggtttttgatccttgataatattgcttacatacctcaattctgtcttccatagatcaattcagtgaagtttaatgagtttaacacagttgtagtctcagctggctatgatcgcacagtgcgtgcatttgattgcagatcacagagcagtgaccctattcaggtattcttattattgttgaagaacatggacccattgattttagtagtattatttcccctttgtttctcatatacttgggtaactgggtttctggtgatttttttcacttggtgcagacaattgatacttttcaagatagtgtaatgtcagttaatttaaccaacacagaaataattgctggcagtgttgatggtactatccgcacatttgacattcgcatgggtaggtaagtacttttcttatttcacaatcaatattcaaccaattctcatttgttatcttagctttcctaaatggaactttgggtgcttctctttttgaatagaagtattcagatgcttatccatgcttcaacagattatccactgtgtctgatgcttctgttaccctcttgctgataacagggagactgtcgacaacttggggcatcctgtcaactgtatatctttgtcaaatgaccgcaattgcctattagctaattgtttggattctactgtgaggcttctagacaagtaagtattctctgcaagctgactttatacttcaacatcggcagtccctcctctatttcaagagtgacaaaacaacacccttctgtcaatttttaatttggaagacgacataacagcattttctgctaacactaatttcacatattagttacttttctcaccagttagggagctcactccattcctttactggataacatgctgtttcccttattaaattagtcaatccgtgggggctttcttgctcggctctgatacaacagtgatctcatctgccatcttcctcttaaacatgctagcaaaatttgctttccaagagcaagtagaatgagtccaacaactatattttgcatctgtgctgaacattgttggtgttgttgcctgtggagctacttcatttttgcatctgcagtttcctttaaagaaacaatttgggagtttgtattgcaaaatctggttagacactacttttgttttgtggaaaagaaagcttcaagttaacttgtgttatggaactgtttacctttttaatgtcaaatggaccactgtccttggtctttgcaacaaatgtcaagccaagtgaagttaatgtgccattgttgtgccacaccatgtattagtgaacaaatccataccaacagcatggtttaggagccatagtttgcttgtggtccacgtgacctggctactttggatgattttgttgtgcacttgtgcttaactacttacagtgtctgcattatgattgtctgtctgtcattcataggttagacctgcttctgttatagtacaatatggaatgtaagaggttatggttgttttgttttttgaagggagaggctatggttgtaaagggtggttttttctatcctttaattatttcctagcaagtccttagagtgcatcactaactttaatgccgtggacttgtggtacatgctgccacaaaattcaactctgactcagaccaaaagaaaaaaaaaactctaccatgtttccattatgaaaactgactgaacaggggatgttgtgactctgaccatgttattttgtagaattcgtgggtgttgtttttacaaaatgctatgtggagggccctaacccactgcaagtgcaccttcatcattaaattgtttcttttggtgattgatccatttatcttttgttgcattgattaggtccactggggaactgttacaagagtacaaagggcatatatgcaaggtatctctcaaataagcttccattgcattggtgattctgtagtcataatttctggattttcatatgtacattaccagtctgttcaactttttcttgcaattaatgttcgtgaatgaaatacttaagcgagatcaaaactatgcatctcatcattatcagtttttaaaacttttaactttcatatttccagtccttcaagatggattgctgcctaaccaacgatgatgcatttgttgttggtggatccgaggatggttacattttcttctgggagttagtggatgcacctgttgtttcaagctttcgagctcatagttctgtggtatttccttgttttgcttaaatctggccaaaccattattactgattaaatgacattttctcttgttttctgtcatttttgcttttaaccatgtcatatactatatatatatatttttcttatggcaggtcactagcgtcagttatcacccaacaagggcttgcatgctaacttcatctgttgatggcaccattcgtgtttggacctaaaagtgggaattgctgttgtgctggactcatatcctgacaacattgcttatgtggcattattctccaattcatctatttttgaagcagagaggattgaaaaggatagatgttcgcaagttcaaccctaactggaaccaaggagctgggtgttaagataagattgtgctacttggcagtagttctggacacggtcaaggcagcaatttgctagtgaggatgaactatatccaccaagctaagtcttctgcgcagcaagctccgacatgtgaaatacagtctgccgatgtaccatggccattacagctagttcaatcgtgagaactggaccagtcgaactgagtatccgtttggaactttacgatctggaacgagtgtacccatttgttactacggtcacctacgggtaatttttaacctgagattgatgatgatataatacggctcttttggtcataaataacttagttcttttcctctaaaaaaaatttaacttagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0543400, RefSeq:Os02g0543400