Os02g0546600

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Revision as of 02:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0546600| Description = Similar to AP2 domain containing protein RAP2.2 (Fragment)| Version = NM_001053616.1 GI:115446602 GeneID:4329612| Le...")
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Gene Name

Os02g0546600

Description

Similar to AP2 domain containing protein RAP2.2 (Fragment)

Version

NM_001053616.1 GI:115446602 GeneID:4329612

Length

1110 bp

Definition

Oryza sativa Japonica Group Os02g0546600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21348729..21349838

Sequence Coding Region

21348975..21349423,21349542..21349836

Expression

GEO Profiles:Os02g0546600

Genome Context

<gbrowseImage1> name=NC_008395:21348729..21349838 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21348729..21349838 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gccctcagcaagatcaagtgcacgttcgatctcgacgtcgccacgcgaaatcccactggacggacagcgttcttgaatataatcttgatcgatgcggccgccggcaatggcggcgctcttcgaggccgcggagacggcggccatcgtggctgcgctgacgcgcgtcattgccgacggcgggcgtggaggcggcggcggcgtctgcgtgccgccgcccgcgccgtcgttggtcgtgccgccgcgggcgggaacaggcggcgggcggcgcgtcgacgttgcgcgggaggaggagatgcgggagatcacgccggcggggcaaacgtggccgaggcggcggcggcggtggtggtggcggcgccggcgacagcgcgcaggtaccgcggggtgaggcggcgaccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctggctgggcaccttccgcaccgccgaggacgcggcgcgcgcctacgacgccgccgcgctacgcttccgcgggcgccgcgccaagctcaacttccccgaggaggtgtcccgcccgtggcagggtcacgatgtcgatcacatgtcctgctcgccgccgtcgatctcgaacgctcgctttctgggttcgtggaccttcggaccgccgcagccgccatcgcggtccgtcgcggcggcggcgacgactctgcttggtgggagccatggaggcaacggagcagagaacgggagggaatag</cdnaseq>

Protein Sequence

<aaseq>ALSKIKCTFDLDVATRNPTGRTAFLNIILIDAAAGNGGALRGRG DGGHRGCADARHCRRRAWRRRRRLRAAARAVVGRAAAGGNRRRAARRRCAGGGDAGDH AGGANVAEAAAAVVVAAPATARRYRGVRRRPWGKWAAEIRDPRKAARVWLGTFRTAED AARAYDAAALRFRGRRAKLNFPEEVSRPWQGHDVDHMSCSPPSISNARFLGSWTFGPP QPPSRSVAAAATTLLGGSHGGNGAENGRE</aaseq>

Gene Sequence

<dnaseqindica>416..864#3..297#atgccctcagcaagatcaagtgcacgttcgatctcgacgtcgccacgcgaaatcccactggacggacagcgttcttgaatataatcttgatcgatgcggccgccggcaatggcggcgctcttcgaggccgcggagacggcggccatcgtggctgcgctgacgcgcgtcattgccgacggcgggcgtggaggcggcggcggcgtctgcgtgccgccgcccgcgccgtcgttggtcgtgccgccgcgggcgggaacaggcggcgggcggcgcgtcgacgttgcgcgggaggaggagatggtcggcgtcgtctccggtacctctgtttgttgctccatcctgtgctgctcgacccgcggaacggatgatgatgatgtgtgtttatgttgtgttgtgtactgcgatgtttaatttacagcgggagatcacgccggcggggcaaacgtggccgaggcggcggcggcggtggtggtggcggcgccggcgacagcgcgcaggtaccgcggggtgaggcggcgaccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctggctgggcaccttccgcaccgccgaggacgcggcgcgcgcctacgacgccgccgcgctacgcttccgcgggcgccgcgccaagctcaacttccccgaggaggtgtcccgcccgtggcagggtcacgatgtcgatcacatgtcctgctcgccgccgtcgatctcgaacgctcgctttctgggttcgtggaccttcggaccgccgcagccgccatcgcggtccgtcgcggcggcggcgacgactctgcttggtgggagccatggaggcaacggagcagagaacgggagggaatagcgcgcgagacaaaaagggctggagagatgggaatcgtcgtcccgggtactcctagtccacagaacttgaattagactcgcatttcgttttttttcggcatagtagtatttattttgttttaagttggtggtgtagccttttcttttcttcttcttttcgttcttcttggataatgctgctgcattttgttcgatattatcggtagtactgtttggtgatgttttaatatatttctaaataaaagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0546600, RefSeq:Os02g0546600