Os10g0418100

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Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0418100| Description = Similar to Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8)| Version = NM_0...")
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Gene Name

Os10g0418100

Description

Similar to Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8)

Version

NM_001071147.1 GI:115482037 GeneID:4348639

Length

1503 bp

Definition

Oryza sativa Japonica Group Os10g0418100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15139204..15140706

Sequence Coding Region

15139330..15140706

Expression

GEO Profiles:Os10g0418100

Genome Context

<gbrowseImage1> name=NC_008403:15139204..15140706 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15139204..15140706 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tggaaaggcgccgccgagatggtgctcgcgaggtgcaccgtgtacgtcggcgcagacggcgccgcgcgcgagctcggcgtggagcagaggaggaagctcgagcaggtgatcaacgacatggcggcggcgagcctccgctgcatcgcgttcgcctacaagcaagtcgtcgacggcggcgacagcgacaacgccaagatcgacgacgaggggctgacattgctgggcttcgtcggactgaaagacccgtgcagaccagaggtaaaatccgccatcgaagcttgcaccaaagcaggcatcgccgtcaagatggtcaccggcgacaacgtcctcacggctcgcgccatcgccaaggaatgcggcatcatctccggcaacgacgacgacgccgccggcgtcgtgatcgaggggcacgagttccgcgccatgtcggagcaggagcagctcgccatcgtcgacaacatccgcgtcatggcgcggtcgctgccactcgacaagctggtgctcgtccagcgcctgaagcagaagggccacgtggtggccgtcaccggcgacggcacgaacgacgcgccggcgctgaaagaagccgacgtgggcctctccatgggagtccagggcaccgaggtcgccaaggagagctccgacatcgtcatcctcaacgacaacttcgacacggtggtgacggcgacgcggtggggccgctgcgtgtacaacaacatccagaagttcatccagttccagctcaccgtcaacgtcgcggcgctcgtcatcaacttcgtgtcggcggtgaccacgggcaggatgccgctgaccacggtgcagctgctgtgggtgaacctgatcatggacaccatgggcgcgctggcgctcgccacggacacgccgacggcggggctgatgcgccgcccgcccatcggccgcgcggcgccgctgatcagcaacgccatgtggcgcaacctggcggcgcaggcggcgtaccaggtggccgtgctgctggcgctccagtaccgcggcttcggcggcgccggcgccggcgagagggcgaacgggacgatgatcttcaacgcgttcgtgctgtgccaggtgttcaacgagttcaacgcgagggagatcgagaggaggaacgtgttcgccggcgtgcaccggaacaggatgttcctgggcatcgtcgccgtcacggtggcgctgcaggtggtgatggtggagttgctgaccaagttcgccggaacggagaggctggggtgggggcagtggggcgcctgcgtcggcattgccgccgtgtcgtggcccatcgggtgggccgtcaagtgcatcccggtgccggagcggccgttccacgagatcatcacggcgaggaggaggaggagaagatcgacataa</cdnaseq>

Protein Sequence

<aaseq>WKGAAEMVLARCTVYVGADGAARELGVEQRRKLEQVINDMAAAS LRCIAFAYKQVVDGGDSDNAKIDDEGLTLLGFVGLKDPCRPEVKSAIEACTKAGIAVK MVTGDNVLTARAIAKECGIISGNDDDAAGVVIEGHEFRAMSEQEQLAIVDNIRVMARS LPLDKLVLVQRLKQKGHVVAVTGDGTNDAPALKEADVGLSMGVQGTEVAKESSDIVIL NDNFDTVVTATRWGRCVYNNIQKFIQFQLTVNVAALVINFVSAVTTGRMPLTTVQLLW VNLIMDTMGALALATDTPTAGLMRRPPIGRAAPLISNAMWRNLAAQAAYQVAVLLALQ YRGFGGAGAGERANGTMIFNAFVLCQVFNEFNAREIERRNVFAGVHRNRMFLGIVAVT VALQVVMVELLTKFAGTERLGWGQWGACVGIAAVSWPIGWAVKCIPVPERPFHEIITA RRRRRRST</aaseq>

Gene Sequence

<dnaseqindica>1..1377#tggaaaggcgccgccgagatggtgctcgcgaggtgcaccgtgtacgtcggcgcagacggcgccgcgcgcgagctcggcgtggagcagaggaggaagctcgagcaggtgatcaacgacatggcggcggcgagcctccgctgcatcgcgttcgcctacaagcaagtcgtcgacggcggcgacagcgacaacgccaagatcgacgacgaggggctgacattgctgggcttcgtcggactgaaagacccgtgcagaccagaggtaaaatccgccatcgaagcttgcaccaaagcaggcatcgccgtcaagatggtcaccggcgacaacgtcctcacggctcgcgccatcgccaaggaatgcggcatcatctccggcaacgacgacgacgccgccggcgtcgtgatcgaggggcacgagttccgcgccatgtcggagcaggagcagctcgccatcgtcgacaacatccgcgtcatggcgcggtcgctgccactcgacaagctggtgctcgtccagcgcctgaagcagaagggccacgtggtggccgtcaccggcgacggcacgaacgacgcgccggcgctgaaagaagccgacgtgggcctctccatgggagtccagggcaccgaggtcgccaaggagagctccgacatcgtcatcctcaacgacaacttcgacacggtggtgacggcgacgcggtggggccgctgcgtgtacaacaacatccagaagttcatccagttccagctcaccgtcaacgtcgcggcgctcgtcatcaacttcgtgtcggcggtgaccacgggcaggatgccgctgaccacggtgcagctgctgtgggtgaacctgatcatggacaccatgggcgcgctggcgctcgccacggacacgccgacggcggggctgatgcgccgcccgcccatcggccgcgcggcgccgctgatcagcaacgccatgtggcgcaacctggcggcgcaggcggcgtaccaggtggccgtgctgctggcgctccagtaccgcggcttcggcggcgccggcgccggcgagagggcgaacgggacgatgatcttcaacgcgttcgtgctgtgccaggtgttcaacgagttcaacgcgagggagatcgagaggaggaacgtgttcgccggcgtgcaccggaacaggatgttcctgggcatcgtcgccgtcacggtggcgctgcaggtggtgatggtggagttgctgaccaagttcgccggaacggagaggctggggtgggggcagtggggcgcctgcgtcggcattgccgccgtgtcgtggcccatcgggtgggccgtcaagtgcatcccggtgccggagcggccgttccacgagatcatcacggcgaggaggaggaggagaagatcgacataactatcaacgcttaccactgttcatattttcggatttttgtcggtagcttaggccattcttttggagatattataccatcttgttatttgccatatataatatgatatatgatttgtttggttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0418100, RefSeq:Os10g0418100