Os02g0550600

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Revision as of 02:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0550600| Description = Plant neutral invertase family protein| Version = NM_001053630.1 GI:115446630 GeneID:4329626| Length = 3834 bp| Def...")
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Gene Name

Os02g0550600

Description

Plant neutral invertase family protein

Version

NM_001053630.1 GI:115446630 GeneID:4329626

Length

3834 bp

Definition

Oryza sativa Japonica Group Os02g0550600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21575760..21579593

Sequence Coding Region

21576352..21576647,21577079..21577637,21578477..21578908,21579024..21579425

Expression

GEO Profiles:Os02g0550600

Genome Context

<gbrowseImage1> name=NC_008395:21575760..21579593 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21575760..21579593 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctggcggtgggagcgggcgggatgcggaggtcggcgtcgcacacgtcgctgtcggagtcggacgacttcgacctgtcgcggctgctgaacaagccgcggatcaacgtcgagcggcagcgctcgttcgacgaccgctcgctcagcgacgtctcctactccggcggcggccacggcggcaccaggggcggcttcgacggcatgtactcgccggggggtggcctgcggtcgctcgtcggcaccccggcctcctccgcgctccactccttcgagccccaccccatcgtcggcgacgcctgggaggcgctccgccgctcgctcgtcttcttccgcggccagcccctcggcaccatcgccgccttcgaccacgcctccgaggaggtcctcaactacgaccaggtgttcgtgagggatttcgtgccgagcgcgctggcgttcctgatgaacggcgagccggagatcgtgaggcacttcctgctcaagacgctcctgctgcagggctgggagaagaaggtcgatcggttcaagctcggggagggcgccatgccggccagcttcaaagtgctccatgactccaagaagggcgtcgacaccctgcatgcggatttcggggagagcgccattggcagggtggctcccgtggattcggggttctggtggatcatacttctacgggcatacaccaagtccaccggggatctcacgctcgcggagacgccggaatgccagaagggaatgaggctgatactgagcctgtgcttgtctgaggggtttgataccttcccaacattgctgtgtgcagacggttgctgcatgatagatcgcagaatgggtgtttatgggtaccctattgagattcaagccctgttctttatggcactaaggtgtgctcttcaattgcttaagcatgataacgaagggaaagagtttgtagagaggattgcaactcgtcttcacgctctaagttatcacatgcggagttactattggcttgatttccagcagctaaatgatatttatcgctataagacagaggaatattcccacactgctgtcaacaaattcaatgtcatcccagattctattccggattggttatttgattttatgccttgccagggtggttttttcattggtaatgttagtcctgcaaggatggacttccggtggtttgcacttggaaacatgattgctatactatcatcccttgctacacctgagcaatcaacggccataatggatctcattgaggagcgatgggaagagcttattggtgaaatgcctctgaagatatgctaccctgctattgagaatcacgaatggcgtattgtgacaggctgtgatccgaagaatactagatggagttaccacaatggaggatcttggccagtactactatggctgctcacagcagcctgcatcaagactggccggccacaaattgcaaggcgtgcaattgacttagctgagagaaggctgttgaaggatggttggccagagtactatgatgggaagcttgggcggtatgtcggcaagcaggcaaggaaattccagacttggtctatcgcagggtatttggtcgccaagatgatgcttgaggacccttctcatctcggaatgatatcactagaggaggataaggcaatgaagcctgttttgaagaggtctgcctcatggacaaactaa</cdnaseq>

Protein Sequence

<aaseq>MELAVGAGGMRRSASHTSLSESDDFDLSRLLNKPRINVERQRSF DDRSLSDVSYSGGGHGGTRGGFDGMYSPGGGLRSLVGTPASSALHSFEPHPIVGDAWE ALRRSLVFFRGQPLGTIAAFDHASEEVLNYDQVFVRDFVPSALAFLMNGEPEIVRHFL LKTLLLQGWEKKVDRFKLGEGAMPASFKVLHDSKKGVDTLHADFGESAIGRVAPVDSG FWWIILLRAYTKSTGDLTLAETPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDR RMGVYGYPIEIQALFFMALRCALQLLKHDNEGKEFVERIATRLHALSYHMRSYYWLDF QQLNDIYRYKTEEYSHTAVNKFNVIPDSIPDWLFDFMPCQGGFFIGNVSPARMDFRWF ALGNMIAILSSLATPEQSTAIMDLIEERWEELIGEMPLKICYPAIENHEWRIVTGCDP KNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIARRAIDLAERRLLKDGWPEYYDGKLG RYVGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKAMKPVLKRSASWTN</aaseq>

Gene Sequence

<dnaseqindica>2947..3242#1957..2515#686..1117#169..570#atcgagattcgcgtggccttgtggtcaccgccgccgccgccgcctagatctctcgctgcgtctctccctccctcccctccggcgatccgcgtagatctgggcgggaggcggcggagatccgcggcgaggaggggagggaggggaagcaagcaagcaaagcggaggggcatggagctggcggtgggagcgggcgggatgcggaggtcggcgtcgcacacgtcgctgtcggagtcggacgacttcgacctgtcgcggctgctgaacaagccgcggatcaacgtcgagcggcagcgctcgttcgacgaccgctcgctcagcgacgtctcctactccggcggcggccacggcggcaccaggggcggcttcgacggcatgtactcgccggggggtggcctgcggtcgctcgtcggcaccccggcctcctccgcgctccactccttcgagccccaccccatcgtcggcgacgcctgggaggcgctccgccgctcgctcgtcttcttccgcggccagcccctcggcaccatcgccgccttcgaccacgcctccgaggaggtcctcaactacgaccaggttggttagctattcgcggcggcggcgctttcggattgtgcggattcagctcatctggaaaccgcatggcttgtctcatctggggagcttttgctttgctttgctttgctcgcaggtgttcgtgagggatttcgtgccgagcgcgctggcgttcctgatgaacggcgagccggagatcgtgaggcacttcctgctcaagacgctcctgctgcagggctgggagaagaaggtcgatcggttcaagctcggggagggcgccatgccggccagcttcaaagtgctccatgactccaagaagggcgtcgacaccctgcatgcggatttcggggagagcgccattggcagggtggctcccgtggattcggggttctggtggatcatacttctacgggcatacaccaagtccaccggggatctcacgctcgcggagacgccggaatgccagaagggaatgaggctgatactgagcctgtgcttgtctgaggggtttgataccttcccaacattgctgtgtgcagacggttgctgcatgatagatcgcagaatggtaaactttactgtggcgctcaagttttttttttttataaaaacatgtttcaaactcacaagtgtataaactataattaacatttctattataacggaagcatctggtctgatttttgctgacagtaacatcactaataaacttttggataatttaccatttgtaccaaaagtcatgacgctgtagatttaattttacattggtattggttaaattatgtgagatttcagtaatttcatgacaatttgcttgatttctgtgatctgcctgcaacatatttgattcttcatacgataactttcttgtggtttgaatgattcttcatcttcatacagttaatatattgcacattggcagcactattttataactgggacagggctctcagttcgttcttgtgggcgcggtttagatttcaaatgccattactatatttgaacctacatttgctaatgagtggagaatatcatataggcatgtagccttctgcttgcttcatctgctggatcctgcttttaccatttgtatgggtccatgccctaatacgtggacatgcaacactctactcagtcctgataactgtcccctttcttgttatatgaagttccagatgctattttggttacacagaagtgtagaatagaaattagaattatggaaatcgctgatagatctgtttacttgtgaacatttgtttctgacttttcacatatgcttctgatatgtcttatgtctttatgagtaactgatgagctcatgggctgtaatgcttacttaaatcaaaatggcctatggctaagcttccttttgctcactcctgttgttgatctttgttgtagggtgtttatgggtaccctattgagattcaagccctgttctttatggcactaaggtgtgctcttcaattgcttaagcatgataacgaagggaaagagtttgtagagaggattgcaactcgtcttcacgctctaagttatcacatgcggagttactattggcttgatttccagcagctaaatgatatttatcgctataagacagaggaatattcccacactgctgtcaacaaattcaatgtcatcccagattctattccggattggttatttgattttatgccttgccagggtggttttttcattggtaatgttagtcctgcaaggatggacttccggtggtttgcacttggaaacatgattgctatactatcatcccttgctacacctgagcaatcaacggccataatggatctcattgaggagcgatgggaagagcttattggtgaaatgcctctgaagatatgctaccctgctattgagaatcacgaatggcgtattgtgacaggctgtgatccgaagaatactagatggagttaccacaatggaggatcttggccaggttagaaggttttcttattatttaaatctctcttaaatattacagtttttagtcgcaaaaatgttatcatgcttcccttttatcattatgtgatttggacgctgaattaaaccaattgataaccatataccatctttcggtgattagtgaaggaccatatacatttgtgcccaagatttctgtttatgagctatggccttaaatgaaatttttatgtgctgagaagagcaatgtttattaaatttgatgccttctcttttttcctcacggagtcacggtacatgtgcccatgaaacctacgtataaacatataacatcacattatatctcttctgattttctgtgttatttgtactacaaacggatagcatgacattgagtaacttcaacatgttataactttaacacaatttttcccattctttctgcagtactactatggctgctcacagcagcctgcatcaagactggccggccacaaattgcaaggcgtgcaattgacttagctgagagaaggctgttgaaggatggttggccagagtactatgatgggaagcttgggcggtatgtcggcaagcaggcaaggaaattccagacttggtctatcgcagggtatttggtcgccaagatgatgcttgaggacccttctcatctcggaatgatatcactagaggaggataaggcaatgaagcctgttttgaagaggtctgcctcatggacaaactaagatgtcgacgaaaatttttagggaagcaaagtcagtttgggaacaaaaattcttttggtagctcttctctgctcatccctccgtttgacttttcgaaccggaaaggtttgtttcatctggatttcccggttgtacaatatgtcagcccatttcttagctaaaaagaagcaattgcggaaatgggtgttttggtttcaatccctgcttgtaagaagattcctgctttgggtcaaaaatcttaaagctgattccagtttcctggtcttttgatggagagaagtgctactctaacgaataataaaagctcatttttctgcagtgcctcctatccagagggttcgttaacttgctgcctgagaagggcaagtcatacaaactgtgtgccttgtatgtttcttcctcttttcgttctcttacaaaattgaagttgtacttgtgttcaaggaaagatcttggcaaaagcttttccctggtcccctggttggatatcacagtatcttgggttcttgagacattgttggaacatgcttgctagtttgtgcaagcaagtgataataattcatttggagttatctcaacgactttatcttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0550600, RefSeq:Os02g0550600