Os02g0551400

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Revision as of 02:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0551400| Description = Myb, DNA-binding domain containing protein| Version = NM_001053635.1 GI:115446640 GeneID:4329631| Length = 4184 bp| ...")
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Gene Name

Os02g0551400

Description

Myb, DNA-binding domain containing protein

Version

NM_001053635.1 GI:115446640 GeneID:4329631

Length

4184 bp

Definition

Oryza sativa Japonica Group Os02g0551400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21621261..21625444

Sequence Coding Region

21621611..21622833,21622921..21623065,21623445..21623813,21624632..21624718,21624873..21625071
,21625201..21625337

Expression

GEO Profiles:Os02g0551400

Genome Context

<gbrowseImage1> name=NC_008395:21621261..21625444 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21621261..21625444 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaaaaggagttccccggccaagcgccgacgagtcggttacactccgagatggacgcggcggcggccggcgggggcggggcggcaaagcggaagcgcagcttctccgaggacgacgcctacctcatcctgcacaggtaccagccggcgacgatcctgacgatgctgcaggagatggggaagcaggtgggcgcggggaaggggatcgactggagggcgctggtgcggaggacgagcaccgggatcacctccgcgcgcgagtaccagatgctgtggcgccacctcgcctacggccacgagttcgtcgagagcgtcgagcccgcctccctgccgctggacgatgggagtgatctagaatgtgagattgagattgtccctgctccgggtaatgaagcattagctgaggccacatcgtttgccaagactattatcaccggatcttcacgtgaacaaacctctggtcaacgtgtcaactcagaagctgctgcgctaaacactccaaatgaaaagatagtgcgtgttccatctgataaacagcttgtgcctggtcaccgtctaacaaacggtacaggtccggtttccagctcaaagcagccctcccacacaggctcatctcctgatcctttggaccctaatggacatcccaaaaagaaaaagaagcctaaaccatggtccagagaggaggacatggaactaggagcaggtgtacagaagcatggtgaaggaaattggatggaaattctgcataaatataaatttgatagttcaaggacgcatcttcaacttcaacagagatgggcgcttatttgcaagcgtcaggggtcaaccaagcctgctacccctaaaatacccaatgttatgtcggaggaactaaaggcagcacaaaaagcattttcattggccattgggacgaccagatcgtctacattaagaccaggaggtgtgccacatcacaatccaatggttactactacgaatcctgaggtgaaatctgttacagcaccttcaccattgccggtaccggtgcatgttgttccggtgcctgttccagtgcaaccagtacaagtgcagttaccaccacctcagttgcatcaagcacctgcgcaatctgcacctccacctccaaaagtatcaaatgcttcaaataagtcacgaaataattctaagaaacaagttgcccaatcaattcctgtgaatggccctttgtcgatacaagaggcagctcttgctgctggtgggcgaattgccgaaccaagtgttgccaccaattttttaaaagctgcacagtccacaaaagctgtgcacataagatctcgaggaacaggatcttcaaaatcttctacgggatctaaaacacctactgtggctggtgaacctgggacacagcttggcagtgatcaacacctagaattacaaagtactggtggtccatctcaagttttgactgcacatgcaactgaacaagttcataatgtttcagaagtcgctggggttaatcctctgggacaatccgctggagtgcatttatcagaaactaagaaagcactgaacaccacaccagtgtctggatcttctgacaaaatggaaatagatgacaactctaattattttgcagtcacaatggaggacttgttccctgaggatgtgaagcaggaagatgttcaagatcccaagattgaggaggccatagaccccaaggatgcagacatgttagaatttgatcgctttgtggcccaaggatgcttaaataaggataatgtggataagagcaaggctgccaagattgctccagaagctcaaagcgttattggcagccagaaaaaacagctgaagacgctgcccacagttggcaaaagcaaccctgtatttgctggacctccagcaactgcgaaaaagaccaaagctccagttccacagggtgggatgtctagcggcatagttggcgtgctgaatagatcattaggagggaaggcacctgctcctgctaccacaggcacccaaagtactgtccagaagcagcaaagcatgagctcaaagggcaacttgttagtgcccaagaatgtggcgcctggcaccgtaacaccagccaacaaccgggccaacacagcggtgaacggggctagcaaggtgaatccaccagccagccagaagccagcctaa</cdnaseq>

Protein Sequence

<aaseq>MKKEFPGQAPTSRLHSEMDAAAAGGGGAAKRKRSFSEDDAYLIL HRYQPATILTMLQEMGKQVGAGKGIDWRALVRRTSTGITSAREYQMLWRHLAYGHEFV ESVEPASLPLDDGSDLECEIEIVPAPGNEALAEATSFAKTIITGSSREQTSGQRVNSE AAALNTPNEKIVRVPSDKQLVPGHRLTNGTGPVSSSKQPSHTGSSPDPLDPNGHPKKK KKPKPWSREEDMELGAGVQKHGEGNWMEILHKYKFDSSRTHLQLQQRWALICKRQGST KPATPKIPNVMSEELKAAQKAFSLAIGTTRSSTLRPGGVPHHNPMVTTTNPEVKSVTA PSPLPVPVHVVPVPVPVQPVQVQLPPPQLHQAPAQSAPPPPKVSNASNKSRNNSKKQV AQSIPVNGPLSIQEAALAAGGRIAEPSVATNFLKAAQSTKAVHIRSRGTGSSKSSTGS KTPTVAGEPGTQLGSDQHLELQSTGGPSQVLTAHATEQVHNVSEVAGVNPLGQSAGVH LSETKKALNTTPVSGSSDKMEIDDNSNYFAVTMEDLFPEDVKQEDVQDPKIEEAIDPK DADMLEFDRFVAQGCLNKDNVDKSKAAKIAPEAQSVIGSQKKQLKTLPTVGKSNPVFA GPPATAKKTKAPVPQGGMSSGIVGVLNRSLGGKAPAPATTGTQSTVQKQQSMSSKGNL LVPKNVAPGTVTPANNRANTAVNGASKVNPPASQKPA</aaseq>

Gene Sequence

<dnaseqindica>2612..3834#2380..2524#1632..2000#727..813#374..572#108..244#cctatgtgactatcttcaattcttcatcccctcttcgctctcatcaacaagcaaatcgagaaaaaaaaaagaaggggagaaaaaataatataataacagaaaaggagatgaaaaaggagttccccggccaagcgccgacgagtcggttacactccgagatggacgcggcggcggccggcgggggcggggcggcaaagcggaagcgcagcttctccgaggacgacgcctacctcatcctgcacaggtaaatccatctcccccatctctctctctctccgttctctcgccccgcggcggaggcggcgggtcgtttctagggtttcgtttcaccggcgcggcgctgcccccccccccccccccccgaacctcgcaggtaccagccggcgacgatcctgacgatgctgcaggagatggggaagcaggtgggcgcggggaaggggatcgactggagggcgctggtgcggaggacgagcaccgggatcacctccgcgcgcgagtaccagatgctgtggcgccacctcgcctacggccacgagttcgtcgagagcgtcgagcccgcctccctgccgctggttcgccactcgccgagatttctgttacttttttatatatattcgggaaattgttgagattttatacagtagtagaagtagatctcagcttgttttcagtgttggttgttcgtttctctgatggtgctgtgctgctgtgaccgataattcgtaggacgatgggagtgatctagaatgtgagattgagattgtccctgctccgggtaatgaagcattagctgaggccacatcgtttgccaaggtatcactttctggaaagaccattatcttgtacaaccgaagcctataatttcgtatagcgtggatgcttctttcgagtataagatgctaaaactggttgatttccccttattttcgcacctttttttttctgtgtgattatgtagttcttgtgtgtgtgcgtgtgtcattttgggttcatacgaggcagttgttgcacatattatttgattatggtcgtgatctcctattttatcaccgttcagtatctatctgataatgtgtagtgtttctattattgttggcttccgcaagcacagtttatgctttgacactaacataggttgttgaataacttagtagttatgctagtgtgtatagtttgagatagacagaatatgggcaaacatattcaaaggctattattgatgctcaatactggcagtgttcatagcttgattggtgcttcattatcaactggaagatagtgctccgtgtgtttttcactacaaatagggcaataaaaagttcctttgtggatgtgaaaatgcatgggaaaaatgttctcttttttcagtgtgtggccttccctgccatctaataatttacaagttaaaattgtgtgtagtggcacacttatagtgcttgcaggcagtcttgaattacatgtgtctagaaagacataaaagggcaatcaattttagtttatggaaaagattgtcgtatggaatgtgatgcacaaaaccacctaacctctagtttctttggcaattttgcatggtattcttttgaggcctgtggttctgtgtaatggcacctgatcctgtcatgcaatttcagactattatcaccggatcttcacgtgaacaaacctctggtcaacgtgtcaactcagaagctgctgcgctaaacactccaaatgaaaagatagtgcgtgttccatctgataaacagcttgtgcctggtcaccgtctaacaaacggtacaggtccggtttccagctcaaagcagccctcccacacaggctcatctcctgatcctttggaccctaatggacatcccaaaaagaaaaagaagcctaaaccatggtccagagaggaggacatggaactaggagcaggtgtacagaagcatggtgaaggaaattggatggaaattctgcataaatataaatttgatagttcaaggacgcatcttcaacttcaacaggtaagatcaccttgtcaattgcataccagcacccatcattgtgctttgttcattcttattcgcctatatgggattaccattcctgaagtcgcccaacttatggttacatgcattgcaacaattctataatgaaagagtcggcacctccttgcacacagtgcaagtatttaaaaaattaggtgtgctgctgttgcaatcgtttgatcgcttttcatctaagcctatattagagttttcacccatcctagttgagttcttttgtgtaatcgtgcatctggcagttgtgactgctgataactgataaccatggttgatattcccccattttcctcatgtagacagctgtagtctaataagataatgtatgtttttttttcagagatgggcgcttatttgcaagcgtcaggggtcaaccaagcctgctacccctaaaatacccaatgttatgtcggaggaactaaaggcagcacaaaaagcattttcattggccattgggacgaccagatcgtctacattaagaccaggtatcgcaactggcattttttttcccatgtgatcttcggggtggtctttgctgatactttttgtgcttatatgaactgttcatgcaggaggtgtgccacatcacaatccaatggttactactacgaatcctgaggtgaaatctgttacagcaccttcaccattgccggtaccggtgcatgttgttccggtgcctgttccagtgcaaccagtacaagtgcagttaccaccacctcagttgcatcaagcacctgcgcaatctgcacctccacctccaaaagtatcaaatgcttcaaataagtcacgaaataattctaagaaacaagttgcccaatcaattcctgtgaatggccctttgtcgatacaagaggcagctcttgctgctggtgggcgaattgccgaaccaagtgttgccaccaattttttaaaagctgcacagtccacaaaagctgtgcacataagatctcgaggaacaggatcttcaaaatcttctacgggatctaaaacacctactgtggctggtgaacctgggacacagcttggcagtgatcaacacctagaattacaaagtactggtggtccatctcaagttttgactgcacatgcaactgaacaagttcataatgtttcagaagtcgctggggttaatcctctgggacaatccgctggagtgcatttatcagaaactaagaaagcactgaacaccacaccagtgtctggatcttctgacaaaatggaaatagatgacaactctaattattttgcagtcacaatggaggacttgttccctgaggatgtgaagcaggaagatgttcaagatcccaagattgaggaggccatagaccccaaggatgcagacatgttagaatttgatcgctttgtggcccaaggatgcttaaataaggataatgtggataagagcaaggctgccaagattgctccagaagctcaaagcgttattggcagccagaaaaaacagctgaagacgctgcccacagttggcaaaagcaaccctgtatttgctggacctccagcaactgcgaaaaagaccaaagctccagttccacagggtgggatgtctagcggcatagttggcgtgctgaatagatcattaggagggaaggcacctgctcctgctaccacaggcacccaaagtactgtccagaagcagcaaagcatgagctcaaagggcaacttgttagtgcccaagaatgtggcgcctggcaccgtaacaccagccaacaaccgggccaacacagcggtgaacggggctagcaaggtgaatccaccagccagccagaagccagcctaacatggtaaattccttgctataataacgccctaggacttttgtgcgcttagtttacttttgaaatgtaaatagggccacgtagataccatctattctttgcccccctttgcatttgtagctcaattcctttctgaaccaaagcactggtgaaaacattaggttagactggatacaccgtttaatcgctttgccttctctgtgatgtcttagactgatatgttccatttgttaagctggcctgagattatcatgccgccttcctgtacagcctcgcctctttctccgttggatagtttggttgattggccaaatattcagaaactatgtcattgtggcctgatcaaactgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0551400, RefSeq:Os02g0551400