Os02g0551900

From RiceWiki
Revision as of 02:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0551900| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001053638.1 GI:115446646 GeneID:4329635| Length = 344...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0551900

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001053638.1 GI:115446646 GeneID:4329635

Length

3443 bp

Definition

Oryza sativa Japonica Group Os02g0551900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21658815..21662257

Sequence Coding Region

21659118..21659164,21659288..21659346,21660636..21660835,21660945..21661034,21661334..21661477
,21661557..21662048

Expression

GEO Profiles:Os02g0551900

Genome Context

<gbrowseImage1> name=NC_008395:21658815..21662257 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21658815..21662257 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgcagactgccgggcgccgccgccaccgatgggtcaaggagtgggttccgcaggatctggtcgtcgccggtggcccatgcgcgctctacaaatgggtgcgagaggataggttgtcagctctcaaatccagggacaaggaacaagaagcagaactggcaaaacctgaaccaaccaccgaggttctcttcctgtgcagctatgagggctgcgggaaaacttttgttgatgcaggggctcttaggaaacatgctcatgttcacggggagaggcagtatgtgtgtcactatgccggttgcgacaagaaatttttagacagctctaagctgaagaggcattttcttattcatacaggagagaagaactttgtctgccctcatgaaggctgtggaaaggctttctcattggattttaatttaaaggcacacatgaaaacacattctgtggataactatcatgtgtgcaagtacccagaatgtgctcgaaggtttacacaggaatcaaaattaagggctcatatcaagcaacagcatgaaaagggtggtctccagaatccaggtgggtctgcaacaaaccgcagtggtctagcagaccactcccataatagtcacacaccgaaaccgtcagcagctccacccactccctcagctgatcgcccatacgtctgtccttatgatggttgtgccaaggcatacattcatgagtacaaacttaacctccatctgaagaaagagcaccctaatcactaccaggatgccggtgctcaagccgcctcttcgaagatgtcgaagcgaagaagcaagccctccttgacggccaagatgccactgcccaaggtccctaagcgcaggggttacacagagccataccaacctcctgttagtgttgtcgaagagcaccagtggccgaggaatgtgctgtacgaggacgatagcgaggagactgaggaagagggagataatgttggggacggggcgaggtacagagctgctagcagcgacgacgatgaggagactgaggacgaagaatga</cdnaseq>

Protein Sequence

<aaseq>MMQTAGRRRHRWVKEWVPQDLVVAGGPCALYKWVREDRLSALKS RDKEQEAELAKPEPTTEVLFLCSYEGCGKTFVDAGALRKHAHVHGERQYVCHYAGCDK KFLDSSKLKRHFLIHTGEKNFVCPHEGCGKAFSLDFNLKAHMKTHSVDNYHVCKYPEC ARRFTQESKLRAHIKQQHEKGGLQNPGGSATNRSGLADHSHNSHTPKPSAAPPTPSAD RPYVCPYDGCAKAYIHEYKLNLHLKKEHPNHYQDAGAQAASSKMSKRRSKPSLTAKMP LPKVPKRRGYTEPYQPPVSVVEEHQWPRNVLYEDDSEETEEEGDNVGDGARYRAASSD DDEETEDEE</aaseq>

Gene Sequence

<dnaseqindica>304..350#474..532#1822..2021#2131..2220#2520..2663#2743..3234#aatcgcaaccgcaagccaccttgctctgcttgctactctcgttgttggcgcggcgcggcccggccttggggggggatggatggggatgtggctggggtgggagtgggagcagccatagatttcctcctcctcctcctcccttagccgccaccaccacctccctccaccaccatgccgtcaccatcccagccgtcctcctcctcctcccccaagcttctcaaccctagccgcaacgcaaaccctccactcctcctctccccttagcccccccctaacgccgccgcaaattaaccgacgtcgacgatgatgcagactgccgggcgccgccgccaccgatgggtcaaggagtggtccgttcctctttcctcctcgaattccaatcccttcttctaatgggagagagcttcttgttggtttgattcggattcggatctgatctctcgtccgcgccacgcgcttatacatgttgttagggttccgcaggatctggtcgtcgccggtggcccatgcgcgctctacaaatgggtgcgaggtacgccccgccctcttcaattttttgctttgcctccccgccctgttactactttgctatgtgcggtttatcgtccgtatgctcgcgcgtgatgttatcatgcgcgatgggatcccttgcagttgccggctgcttgaattccatgggaggttggtttatcagagaggacctgtttaggcattttttttctgaattggcccctcccctggctagctttaccgcaggggagctatgcgatttgcttggcctgtgactttgtgacagctttgacggtaattagtacgcgttctaaacagctaatggatgtatggattatttgtgcaacgctcttggaagtacgatttcttaaaaaaaaaaaagaagctcttggaagtacaatttgtttttaaaaaaaagctttctacatcagcattgtttagataagtttttctaagctttttgctagctttatactccctccatttacttttgataggcatatttccaaatctgaaaattttatttttcataagcatatttcaatccaacaacctatcctcttaatgactttctcagatttaatgcgtgactctccattcttccacacaagattgactacatgggcatcgagaaatgtaaatattaatgaatcgcttgtttacgaggaataactagtagcatgcttaaatggatgataagtagaattacttatctttggtctgtgtaccaagatgaaatatgaccatcaaaagtagatggagtgagtaatatttaatccatccatatgagcaattttcctctgtctgtctatgatctatccaatcacccagttaaaacgcgcccttagttcgctttcggttttcatgctgtccgttcattactgtatggcataagcattgcagtccaagtacctgggactgcgaggcacaggtgtagtccttttgacttttggaatagtgagatttactatgttttttttatcatttccaaatttcagaccctataaaccaatttgttctagtaaataaataacttgatctgagataaatgtagcgaacaattgaaattttgtcaaacgtttttttagcgagttacaagtatatcttttgaccaatatcccatgcctttgcagtctgcactacatctgagcttcacttcgacatatttatgagcagtgtagagttctcattcggcatgtccaaccaataaggatactaaactagttgaattcatttgttgggcttgggcatgccttttgttctgtgaactaccctttcagctgttaatattttcaccttatttctttacagaggataggttgtcagctctcaaatccagggacaaggaacaagaagcagaactggcaaaacctgaaccaaccaccgaggttctcttcctgtgcagctatgagggctgcgggaaaacttttgttgatgcaggggctcttaggaaacatgctcatgttcacggggagaggcagtatgtgtgtcactatgccggttgcgacaaggtactgcctgtaatctttcttgcctgcgttggcctttctggatcactatggcattgctgcttctgggttgttcgctaatgttattttctttttgaatctgactttgcagaaatttttagacagctctaagctgaagaggcattttcttattcatacaggagagaagaactttgtctgccctcatgaaggctgtggaaaggtaattaatatgatctctccattgtaaactttgtcattcatttctattccttgactgcattttccgtacgatgcataaatttcaaatacatgttaaatagtccatatggagtggcatatcaacacttattccctttctctaatagtattgagtttttttgggccatgcttggatatggtcaaacattctaattatggaataaaccccccaccccctttggcattatcggtaattgttgctgttaatttgttaggttttggtatgtttcttgttaacatatttggtcctggttattgcaggctttctcattggattttaatttaaaggcacacatgaaaacacattctgtggataactatcatgtgtgcaagtacccagaatgtgctcgaaggtttacacaggaatcaaaattaagggctcatatcaagcaacagcatgaaaaggtaagatctaattatacctccagatttgtgcttaggaaggaaccagttctgaccacttactttcataacactgatatagggtggtctccagaatccaggtgggtctgcaacaaaccgcagtggtctagcagaccactcccataatagtcacacaccgaaaccgtcagcagctccacccactccctcagctgatcgcccatacgtctgtccttatgatggttgtgccaaggcatacattcatgagtacaaacttaacctccatctgaagaaagagcaccctaatcactaccaggatgccggtgctcaagccgcctcttcgaagatgtcgaagcgaagaagcaagccctccttgacggccaagatgccactgcccaaggtccctaagcgcaggggttacacagagccataccaacctcctgttagtgttgtcgaagagcaccagtggccgaggaatgtgctgtacgaggacgatagcgaggagactgaggaagagggagataatgttggggacggggcgaggtacagagctgctagcagcgacgacgatgaggagactgaggacgaagaatgagctgctcagatcagtcgttttttcatccagtgcttgtgcatatgatttacaaaatcttagcttttgggttatagttttgcatacatgtacaatattcaaaataaggctgggtagttggtcagaattgagaattaccccccttccttctgaattatgcaggttggtaatgttgggctgctcccattaatcaaattcaaaaggacaatcac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0551900, RefSeq:Os02g0551900