Os02g0555600

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Revision as of 02:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0555600| Description = Amino acid-binding ACT domain containing protein| Version = NM_001053658.1 GI:115446686 GeneID:4329656| Length = 817...")
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Gene Name

Os02g0555600

Description

Amino acid-binding ACT domain containing protein

Version

NM_001053658.1 GI:115446686 GeneID:4329656

Length

8178 bp

Definition

Oryza sativa Japonica Group Os02g0555600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21843837..21852014

Sequence Coding Region

21848685..21848743,21848866..21848911,21849035..21849149,21849258..21849325,21849759..21850442
,21850648..21850749,21851357..21851728

Expression

GEO Profiles:Os02g0555600

Genome Context

<gbrowseImage1> name=NC_008395:21843837..21852014 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21843837..21852014 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgccttactttgatccggagtatgagaacttcagtcagcgcatcaaccctcctagggtatgcattgacaacagcacctgcagcgactgcaccttagtgaaggtcgacagcatgaacaagaatggcatcctgttggaggtggtgcaagttctgagcgatctcgatctcgccatctcgaaggcgtacatcacctctgatggtggatggttcatggatgtgtttcatgtggtggacaagcaagggcagaaggtgactgatgagaagaccattaagcacattgagaaggcgttaggcccagacagcaacctgctgggtggcgcgaagggcgggtcgtcgccggtgaggtcggtggggatgcactccatcggcgaccacaccgccatcgagctcaaggggcccgaccggacgggcctcctctccgaggtcttcgccgtgctcgccgagctcggctgcaacgtgctcgccgccgaggtgtggacgcaccgcgcccgcgtcgcctgcgtcgtgtacgtgaacgacgtcgcgtcggggcaggccgtcggcgacccgtgccgcctgtcccggatcgagcaccgcctccgcctcgtcctccgcggccacgccggcggcgacgacggcgacggcgacgacggcccggcgcacgccaacttcttctcctccggcggcgccgggtcgaacacccacgtcgaccggcggctccaccagttgatgcacgccgacgtggacgccgacgacgacgacggcctcgacagccgcgccatcgtgtcgggcgaggccgggaacgcggcggcggcggaggagaggccggtggtgacggtggagcactgcgaggagaaggactactcggtggtgaacgtcaagtgcagggacaggtccaagctgctgttcgacatcgtgtgcacgctcaccgacatgcactacgtcgtctcccacgcctccgtctcctccgacggcatctacggcatccaggagctgtacattcgtcggaaggatgggcgcacgctacagaaggacgaagcagggagggtgatcaagtgccttgaagcggccatctccagaagagtatctgagggattcaccctggagctgtgcggcagggacagggtcgggctgctgtccgacgtgacgcgggtgctcagggagcacggcctgacggtgacgagggccgacgtcacgacggtcggcggccaggccatcaacgtcttctacgtccgcgacgcctccggcgagccggtggacatgaagaccatcgagggcctccgcgtccaggtcggccacaccgtcatgctcaacgtcaagaaggtgccctcctccccctcctcctcctccgccgccgccgccgccgccgccaacggcaagtcgccggggcagcctgcctccggcgccctgtccaggaccagcttcttctccttcggcaacctcttcgccaagctcagagcatga</cdnaseq>

Protein Sequence

<aaseq>MLPYFDPEYENFSQRINPPRVCIDNSTCSDCTLVKVDSMNKNGI LLEVVQVLSDLDLAISKAYITSDGGWFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDS NLLGGAKGGSSPVRSVGMHSIGDHTAIELKGPDRTGLLSEVFAVLAELGCNVLAAEVW THRARVACVVYVNDVASGQAVGDPCRLSRIEHRLRLVLRGHAGGDDGDGDDGPAHANF FSSGGAGSNTHVDRRLHQLMHADVDADDDDGLDSRAIVSGEAGNAAAAEERPVVTVEH CEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVSHASVSSDGIYGIQELYIRRKDGR TLQKDEAGRVIKCLEAAISRRVSEGFTLELCGRDRVGLLSDVTRVLREHGLTVTRADV TTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVGHTVMLNVKKVPSSPSSSSAAAAAA ANGKSPGQPASGALSRTSFFSFGNLFAKLRA</aaseq>

Gene Sequence

<dnaseqindica>4849..4907#5030..5075#5199..5313#5422..5489#5923..6606#6812..6913#7521..7892#gtgagtccctctttccctgtcatctctcccctactaggcccatttgccctctcccccctccatccatccatccattcatccatatctcccttccttttgccgtccctttttcttgatttgattcttcttcctcccatggtctctcctcttctctccccttccttacactaacagagagctcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcctctcagctagccgtgctccggctgcgtgagatgtaagacgacgcgcgaatcaaaaatctcaaaatctcaagaagccaagaacagcagcagcaagtagaaggaaaaaggaggagagaattaagagggaatccaagaacagtggtaattaacgctttaccaatctctctctctttttctctcttaaattatttctctcctggattctttggtttgccttgtttgacggtagattagaatcgtgttgtttttcattttcatttttatgtttattagcgtcgaatgattgcagtcttcgtcaatcaggtgggccgacacaaccgacttgctgttcgtgtctctgtttctttccttcttcttcttttttttctgttctaagtatttttcaaaaaaacaaaacaaaaaaaaataaaaacagagagagttttgtcttggttcttggctggtttgcatcatgttgattgggaaagcaaaaatctctctttcgaagccccccatctgccctactgttgctgctgctgttactactactgcctccatcagccgtcggctgcagtcgccgaccggtgggccccactcgtccactttgttgcaaaatctctgtgtctttattgtttcttctggtcgcgatcagagggaggagagaattaattaattaattaattaattaaaggggaaagaaaatcatggatgttatgattggagattggatggttggcttgtgacggcgcatgtacactgtagtcgtatctctctggtagcaccacgtacaattaattagttaattaattgcatagagttttttttttgttcatttttgtttgcttgttttgggaagcctttgattgatgtagcagtagcagtagtatagtactgtagttaccgtgccacacgctgctgataggaggaaggggggcgcgtggcctatctggaccgtcggatggagatcggacggaagggagtgctccacgtggcatcgagattccaatcggggaggcgccgccgcccgccgcacctgcggaaagcggattccctttttgggaaagcgtaaagcgcgcgtggctggctgcctggcctcctctcgcgcagcggattgggcccgcctgtcggtgacaggtgccccaccgggccacgtggctggctgaccaccagtggtagttgactactccgcaattaactactcctacctggataaaaggcaattatgtgccaatcagaaattcagaaatgtgaattcctcttaccagttgacttgagaccatgtggattaccaaggcaaagatgatttggtctatcaccctgctgattaatctaccctccgttcaaaaaaaaaatcaaaccctatatttaaatttggacatatttgattttttttacagagtagtaggttaggtttaggtcttaggacatctctgtgattagtgattaatccccaattgtttcaagtacttgcttgcctatttgtaagtaactttatactctctgtttgtttcagaaaaacaacaaaaaaaaaggaacatttcacattagtatcttcatacaaaatcgttcacctaactacaaactatatacaatagtgaaccgatgacctttctcgcacttaaaaatcttgaacaagattacttgttttgttaaaaaaaactattcccttcatcatgtggatatagtaatctacaactgaaatggatgttttataatagatgtatcccatccgattctagattgttatattctgagacagagcgagtaaatctgatcattttgcatttaacttttcacgattatttgctctttaaactccatattgttcaaaactgggcaatgctccatctattttaaaatacaagacataactatccttagtccaaagaccaaaaaccaattattatcatttttcttgttcatatcatcataataaatacaatacatgcacccaataaaattagagatattgagaataaatgatttaaataataacatttaacttaaagttgccattttcgtattcaaacacgtgctactaactgacaggtgggccctaaccgcggcatgcaacgctggaaaaataagacctaatcaaccgaattttttatttatattaattaataagtcttgaattaaataagtggtaaatcttaaattgaatttgtaaaaataggatggacgttgtttcaaagggcgtccagatttggacgctgttccaagaagtgtccagaggtggacgctgtaccgaagcacgtccaggctcggtttggggcgcccatgccgccatgcggagaggcgccatcgtcgactctcctctcctcaggcccaatgttggtgcagggctcgggcaaggtgctgccatgcccgccgttcacctcgactctgggagactgcaacagccgccttccggcttccgtctccacaatgtcaggaatctgccattgcagttcacctcaactcacctcgaaggctctcgaatccggagaggacgccgccgctttttgccttcacaccgggaggtcgcagccgctatccacgttctggttgagtcatgctggaacaataacccactcgtgccggcttgtgttgcgtcgtctgtccgcccctcttggttcctaacagcaagtccaggcatcgcctcactccaggtggctggccgagcaagtatgctcagttcatagattttggtattcaggtgtatatgttctgcaatagaaagtttacaaagaatgcaaaattacgaagggtaggacgcaaacatcctccttctatcagatcatctgtcgcccgatgacttccaatctctggcttgttgcaaaaggaaaaaaagcatcgatcgaaaacctcgcatgcagttcatctggcggccgcttctcaagattcagtcagcagagagctcgatgcgtagtaaacaatggaccagaacaaaaaccaaactaatcaaatatctcaaaataaaagtggtggctgttcacatatgaccccgagtagagtgtccgtcatgcggaacagcggaagcattgaaggagagccgggggatggcgaccctgtctggcagatcaggtagagagcggtgcctactcggcaagcaagcaatcaacaagagacaatagtctgcataggagtaacgaggcagagttcgaccattgtgtgattggatccaaagtccaatcttagtccggtgaattggacggctctgtggggtcttcaactgcagcattatggacgcccttgtaagaagcgtccccatctggacgttgtctacaacagcatccacacctggacgtcctatgcaatagtgtccttcctattttcgtaaaaattgactttgctttattatatatttaatttctgcattattaattattatgaataaaaaattcggcctaatcaacatcacaacaagaacctctgaaataaaaaaaacacagtaataacaggtataagtaacaaaccacaacgaaccctaataagttcagataatagaaaaggtcttctcaagattcagtcatggcgatcgccgcaagcagggccaacgccaacgccaaccgaagccgccaccatcatcaaccgaggcggtgggaaaaaaattcctcccaatgctggcacgcacgcgcactcgctcgagaatccggcgggtgggactgaaaaaacaaaacaaaaaaaagcagatcgattttgtcatctgcggcgcaaagcgggtgtgcatttcttttcttttatccccacatccagtcaccgtgacgtggttcttgattcctcaggccgggcgattattctagctctagttgggatgattggattggatccccagccagcagcagcaagcaattcttggccatcggttgtgggtggctgttgattcatgcatcacgagcactcaataaagtatgcagatctgtgcgcccctctctgatttgttcatccaggcaaaagagtatcttgcttctgtgaggtgaggtgattgattgattgatcaatgggggtggattgctttcagggagatgtgtatatgttgtgtttgcagtagcccatggtttcttggcaattgttagttttctgatcacagtggttcaagttggttgcctttttttatggttataagcgatgtgctctgaacttctgatccagatttcgatccagttctgcctgcgattcttgagtttttatgtgttccatgtcagtgtctgaatttttgacaggcagttttcagggtgagcaggtgcgttcaggtttcaggtatcgttgtacagaaattgactcgaaactgctcatgactttttcaggatactaaagcgtgaagtgttgggggttagcttttgattgaagccatcgaaaattttccagtgaactttcaggccctgctgaaagaagaatctactgaaaggttggtctaatctactctctaaagtaatttagatcttctttatgaggagcccatcattggtccggtgatgattttaagatcgaagtttctaccctcatgattggaaactatcacagatggttcacaagacgaaactgtgtacttctgtttgcttatatatatctgcatacctcgcatcatgacagtgctggttttcaactcgtaattctttcagagggaagattcgtaaccttggaagatatgctgccttactttgatccggagtatgagaacttcagtcagcgcatcaaccctcctaggtggatctctaatttaaacatctaaattccagagctcctcatatcattatcctgtttcatttcaggctattgtcggaagctccgctactttctgtagctaacaagctgataattttctgcagggtatgcattgacaacagcacctgcagcgactgcaccttagtgaaggtaagaactacttactactctctctcaaaacttgactggataatcttactgaacactgcttccaatattcaagaaccgtttcactgattgcttcgagcaccgtctgtttgcgtttggaggtaggtcgacagcatgaacaagaatggcatcctgttggaggtggtgcaagttctgagcgatctcgatctcgccatctcgaaggcgtacatcacctctgatggtggatggttcatggatggtaaggcagcctatgctatgcaattatatcatatatatgcaaactcatgtatggttcgcggacatcaattgccggtttattcatgatgtctgttacaacctgatgcagtgtttcatgtggtggacaagcaagggcagaaggtgactgatgagaagaccattaagcacattgagaaggtttgtaattttttttccacctgaaaattggtcttaaaatttaccacctgaaagttgaaaacctattttatcctctatatcaagctttcagaattatttttggtgcaactgcatcctgatagtgtttggtttgaaagtattggtagtttaggtgaagtattttcgtatctgttcatcatgtcagtatgtgtttcagtttttgaaaaacattttaaaggttttcctttaatgaattacaaatttagaccgcagtactatttttcatgaggtgtttggaatggatagtggagatatggagccaacaattcctttgaaaactttccatgaaatcaagaatttttttgtgactatagatttacactgaagtgtaaattaaagttgaagtgaaaaactgaaaactgaagtggcagtatcaatttggttaaaattgcaggcgttaggcccagacagcaacctgctgggtggcgcgaagggcgggtcgtcgccggtgaggtcggtggggatgcactccatcggcgaccacaccgccatcgagctcaaggggcccgaccggacgggcctcctctccgaggtcttcgccgtgctcgccgagctcggctgcaacgtgctcgccgccgaggtgtggacgcaccgcgcccgcgtcgcctgcgtcgtgtacgtgaacgacgtcgcgtcggggcaggccgtcggcgacccgtgccgcctgtcccggatcgagcaccgcctccgcctcgtcctccgcggccacgccggcggcgacgacggcgacggcgacgacggcccggcgcacgccaacttcttctcctccggcggcgccgggtcgaacacccacgtcgaccggcggctccaccagttgatgcacgccgacgtggacgccgacgacgacgacggcctcgacagccgcgccatcgtgtcgggcgaggccgggaacgcggcggcggcggaggagaggccggtggtgacggtggagcactgcgaggagaaggactactcggtggtgaacgtcaagtgcagggacaggtccaagctgctgttcgacatcgtgtgcacgctcaccgacatgcactacgtcgtctcccacgcctccgtctcctccgacggcatctacggcatccaggtgtgtactctggactctagcatgtcaacagctgctactaccatatcgaagctcctaccacgacaatgctaagaatttcacatgaaataattcgatttgtagaaagaatattcctgcatttcaaaggagctctgcgccgcgactcggtcaacgttgacttttgacattgcaatgaacttccttttttttattttaatattgtcaggagctgtacattcgtcggaaggatgggcgcacgctacagaaggacgaagcagggagggtgatcaagtgccttgaagcggccatctccagaagagtatctgaggtctgaaccttctttgccactgtctgtacaagcaactagcatcactgcatcagtagaagtagtaactgttagtagtattttgcaaaagaatttctgagcttggctgcatctggaacaagggattaatcaggacatgttgcagattatggtgtatagttctcctagtagtaaagtcacattgattgatcgatacactcacactgaactctgttactagtatgtcggttttgctacagcacctggtaccacattaatctgttcatttttttcagtacactgtttcagttcatcatttagttctattaaccagtagtaacatactgcccttctacctgtcttttctccattttcatatatacctttgactgaattctgattctatttctgaaaaagaaaaaagataaaagtcagattgagttacatgcaccgaccagtacaatagctcgaacaccgagaagcaaatcctctgacttaactacacatgcatacacatacaattgagtcactgacatgtgagttccactttgatatggcgttaagtcagaggatctctttcagctcgaactggagcttgaatatgtgctaacactggtggttgatgatgcagggattcaccctggagctgtgcggcagggacagggtcgggctgctgtccgacgtgacgcgggtgctcagggagcacggcctgacggtgacgagggccgacgtcacgacggtcggcggccaggccatcaacgtcttctacgtccgcgacgcctccggcgagccggtggacatgaagaccatcgagggcctccgcgtccaggtcggccacaccgtcatgctcaacgtcaagaaggtgccctcctccccctcctcctcctccgccgccgccgccgccgccgccaacggcaagtcgccggggcagcctgcctccggcgccctgtccaggaccagcttcttctccttcggcaacctcttcgccaagctcagagcatgatataattcacctgaatctctgaagaattatggtccctttttcgggttgcgcaaatcgccataaggagaaggagatttcagttgaaattttagagtttagggggtgagggtgagaaactgcgtgtggcatatggcagaaaaagaaattgctgttgttgtatagtccataaaccataaggagctctacctaccagtgtaggaaatgagaaaaaaatgctggatccatggtgttggttctgttctgtgcaatgcagattgcagaatgcagactgctcttgagttgcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0555600, RefSeq:Os02g0555600