Os02g0556000

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Revision as of 02:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0556000| Description = Glycosyl transferase, family 8 protein| Version = NM_001053661.2 GI:297599422 GeneID:4329660| Length = 3163 bp| Def...")
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Gene Name

Os02g0556000

Description

Glycosyl transferase, family 8 protein

Version

NM_001053661.2 GI:297599422 GeneID:4329660

Length

3163 bp

Definition

Oryza sativa Japonica Group Os02g0556000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21872651..21875813

Sequence Coding Region

21872651..21874388,21874952..21875155,21875791..21875813

Expression

GEO Profiles:Os02g0556000

Genome Context

<gbrowseImage1> name=NC_008395:21872651..21875813 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21872651..21875813 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaaaacaaataggttcatcaacagcctgagcaagaggggatacataggaagctaccactacgagaaggatgccaagtacaggccattcagtgcactgctccctgagggttcaaaccccaagatgctctatgtcaagctcgtcctcatcatcctcatgtgtggctccttcgtcagcctcctcaactcgccatctatccatcacaacgatgatcaccacacagagtcatcagctggagtgccgagagtgagctacgagccggatgataccaggtacgtgtcggacgtgacggtggactggccaaagatctccaaggcgatgcagctggtcgccggagcggaacacggcggcggcgcgagggtggcgctgctcaacttcgacgacggcgaggtgcagcaatggaggacggcgctgccacagacggccgccgcggtggcgcgcctcgagcgcgccgggagcaacgtgacgtgggagcacctgtacccggagtggatcgacgaggaggagttgtaccacgcgccgacgtgccccgacctgccggagccggcggtggacgccgacggcgacggcgaggaggtggccgtgttcgacgtcgtcgcggtgaagctgccgtgccggcgcgggggtggctggtccaaggacgtggcccggctgcacctgcagctcgccgcggcgcgcctcgccgccacgcgcgggcgcggcggcgccgccgcgcacgtgctcgtggtgagcgcgagccggtgcttcccgatcccgaacctgttccggtgcagggacgaggtggcgccgcgcgacggcgacgtgtggctgtaccggccggacgccgacgcgctccgccgggatctcgccctccccgtcggctcctgcaggctcgccatgccgttcagcgcgctggcggcgccgcacgtcgcggcggcgtcggcgccgccgccgcggcgggaggcgtacgcgacgatcctccactcggaggagctgtacgcgtgcggcgcgctagtggcggcgcagagcatccggatggcctccgcctccggggcgccgtcggagccggagcgcgacatggtggcgctcgtggacgagacgatcagcgcgcgccaccgcggcgcgctggaggcggccgggtggaaggtgcgcgcgatccggcgcgtccgcaacccgcgcgcggcggcggacgcgtacaacgagtggaactacagcaagttctggctgtggtcgctgacggagtacgaccgcgtcgtcttcctcgacgccgacctgctggtgcagcgccccatgtcgccgctcttcgccatgcccgaggtgagcgcgacggcgaaccacggcacgctgttcaactccggcgtgatggtggtggagccgtgcggctgcacgctccgcctgctcatggaccacatcgccgacatcgactcctacaacggcggcgaccaggggtacctcaacgaggtcttctcgtggtggcaccgcctcccgtcgcacgccaacttcatgaagcacttctgggagggggactccggcgagcggctcgccgccgccaggcgcgccgtgctcgccgcggagcccgccgtggccctcgccgtccacttcgtcgggatgaagccgtggttctgcttccgcgactacgactgcaactggaactcgccgcagctcaggcagttcgccagcgacgaggcgcacgcgcggtggtggcgcgcgcacgacgccatgccggcggcgctccaggggttctgcctgctcgacgagcgccagaaggcgctgctccggtgggacgccgccgaggcgagggcggccaacttctccgacggccactggagggtccccatcgccgaccctcgccggaacatctgcgccaccgccgccggcgacggcgaggcggcggcggcgtgcgtcgagagggagatcgagaacaggcgggtggaagggaatagggtgaccacgtcgtacgccaagctcatcgacaacttctga</cdnaseq>

Protein Sequence

<aaseq>MVKTNRFINSLSKRGYIGSYHYEKDAKYRPFSALLPEGSNPKML YVKLVLIILMCGSFVSLLNSPSIHHNDDHHTESSAGVPRVSYEPDDTRYVSDVTVDWP KISKAMQLVAGAEHGGGARVALLNFDDGEVQQWRTALPQTAAAVARLERAGSNVTWEH LYPEWIDEEELYHAPTCPDLPEPAVDADGDGEEVAVFDVVAVKLPCRRGGGWSKDVAR LHLQLAAARLAATRGRGGAAAHVLVVSASRCFPIPNLFRCRDEVAPRDGDVWLYRPDA DALRRDLALPVGSCRLAMPFSALAAPHVAAASAPPPRREAYATILHSEELYACGALVA AQSIRMASASGAPSEPERDMVALVDETISARHRGALEAAGWKVRAIRRVRNPRAAADA YNEWNYSKFWLWSLTEYDRVVFLDADLLVQRPMSPLFAMPEVSATANHGTLFNSGVMV VEPCGCTLRLLMDHIADIDSYNGGDQGYLNEVFSWWHRLPSHANFMKHFWEGDSGERL AAARRAVLAAEPAVALAVHFVGMKPWFCFRDYDCNWNSPQLRQFASDEAHARWWRAHD AMPAALQGFCLLDERQKALLRWDAAEARAANFSDGHWRVPIADPRRNICATAAGDGEA AAACVEREIENRRVEGNRVTTSYAKLIDNF</aaseq>

Gene Sequence

<dnaseqindica>1426..3163#659..862#1..23#atggtgaaaacaaataggttcatgtaagaatagagtcaaaggtagaaaaaaagaaaaataataaggaacaaagctattagggattaaagcgataatgaagagggaattggcacgatgatggagacgatgactagttgtagatgtaagcctggaccgttgaagcatggaactgactgttcttgatgacttcttacaagaggagatgaagaaagagagccattcctttaaaaaaaacaagaagaaagaaagaaagctatgacacatatgactttctggtcttggtctgaaagtaatagaggagatgttatgaaattggtcgtttgaagaaaagtagaaaatgaccaaatgcagaaatagtgattgctgatcacatattggtaaaagccaaagaaaacttaacacctaagttttttttaaaaaaaaccaacaccttagtaaagactgacaagtaattttagttacaggtaatgatttggtcacaaggggcaatcttgttcagttcaaccatatgatttgtgacctttgttagaacttttgaagccctcaactgcacatgctatcgttttctacatatggtctaaatagttatgcaatattctgaagaaaatcgcaaccggattatgaactaattgtgattatttacccgtgttaatttcagcaacagcctgagcaagaggggatacataggaagctaccactacgagaaggatgccaagtacaggccattcagtgcactgctccctgagggttcaaaccccaagatgctctatgtcaagctcgtcctcatcatcctcatgtgtggctccttcgtcagcctcctcaactcgccatctatccatcacaacgatgatcaccacacagagtaagaaaaaaaaaccatacaaaattcatgtttttattcgcaagatttttttaaaaagcaataagttgtaacaaatatttcttttgaaaagataaaggttacgatcattaccacaaagctaccaaattatgtaacataaaatgtagtaccgtttggtgtcttgtaccaggagataccatatttcacaataaaatgtagcacatctttgtatctcctcaaatattataaaattactctttgaaaaaatgattttaatgtcgttgaggaggtagtgaaatgtaccaattttttaagccaagggtcataaaatccgtcttgcagccccattgtttggctgataagaggaaataacgaaacaacacatttgcaaacgaaaaataatttgtgaataaaatttttatatgcgtgttcttaataatctaaaaacaaaggttgaaaaataaactacgatgggaaaaaaatcccaaaatcaactctaaatttaagcataaacgaaaagatgaggccgttgatacgatggtcagtgattaatcctttgcttcgtctgaacttgaaacgcgcaggtcatcagctggagtgccgagagtgagctacgagccggatgataccaggtacgtgtcggacgtgacggtggactggccaaagatctccaaggcgatgcagctggtcgccggagcggaacacggcggcggcgcgagggtggcgctgctcaacttcgacgacggcgaggtgcagcaatggaggacggcgctgccacagacggccgccgcggtggcgcgcctcgagcgcgccgggagcaacgtgacgtgggagcacctgtacccggagtggatcgacgaggaggagttgtaccacgcgccgacgtgccccgacctgccggagccggcggtggacgccgacggcgacggcgaggaggtggccgtgttcgacgtcgtcgcggtgaagctgccgtgccggcgcgggggtggctggtccaaggacgtggcccggctgcacctgcagctcgccgcggcgcgcctcgccgccacgcgcgggcgcggcggcgccgccgcgcacgtgctcgtggtgagcgcgagccggtgcttcccgatcccgaacctgttccggtgcagggacgaggtggcgccgcgcgacggcgacgtgtggctgtaccggccggacgccgacgcgctccgccgggatctcgccctccccgtcggctcctgcaggctcgccatgccgttcagcgcgctggcggcgccgcacgtcgcggcggcgtcggcgccgccgccgcggcgggaggcgtacgcgacgatcctccactcggaggagctgtacgcgtgcggcgcgctagtggcggcgcagagcatccggatggcctccgcctccggggcgccgtcggagccggagcgcgacatggtggcgctcgtggacgagacgatcagcgcgcgccaccgcggcgcgctggaggcggccgggtggaaggtgcgcgcgatccggcgcgtccgcaacccgcgcgcggcggcggacgcgtacaacgagtggaactacagcaagttctggctgtggtcgctgacggagtacgaccgcgtcgtcttcctcgacgccgacctgctggtgcagcgccccatgtcgccgctcttcgccatgcccgaggtgagcgcgacggcgaaccacggcacgctgttcaactccggcgtgatggtggtggagccgtgcggctgcacgctccgcctgctcatggaccacatcgccgacatcgactcctacaacggcggcgaccaggggtacctcaacgaggtcttctcgtggtggcaccgcctcccgtcgcacgccaacttcatgaagcacttctgggagggggactccggcgagcggctcgccgccgccaggcgcgccgtgctcgccgcggagcccgccgtggccctcgccgtccacttcgtcgggatgaagccgtggttctgcttccgcgactacgactgcaactggaactcgccgcagctcaggcagttcgccagcgacgaggcgcacgcgcggtggtggcgcgcgcacgacgccatgccggcggcgctccaggggttctgcctgctcgacgagcgccagaaggcgctgctccggtgggacgccgccgaggcgagggcggccaacttctccgacggccactggagggtccccatcgccgaccctcgccggaacatctgcgccaccgccgccggcgacggcgaggcggcggcggcgtgcgtcgagagggagatcgagaacaggcgggtggaagggaatagggtgaccacgtcgtacgccaagctcatcgacaacttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0556000, RefSeq:Os02g0556000