Os10g0419400

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Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0419400| Description = Similar to SIPL| Version = NM_001071153.1 GI:115482049 GeneID:4348646| Length = 2347 bp| Definition = Oryza sativa ...")
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Gene Name

Os10g0419400

Description

Similar to SIPL

Version

NM_001071153.1 GI:115482049 GeneID:4348646

Length

2347 bp

Definition

Oryza sativa Japonica Group Os10g0419400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15209178..15211524

Sequence Coding Region

15209406..15209469,15209571..15209641,15209985..15210109,15210220..15210334,15210454..15210548
,15210660..15210771,15211422..15211439

Expression

GEO Profiles:Os10g0419400

Genome Context

<gbrowseImage1> name=NC_008403:15209178..15211524 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15209178..15211524 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaacgaattccaggatggtaagacggaggtgatagaagcatggtacatggatgatagcgaagaggaccagaggcttcctcatcaccgcgaacccaaagaattcattcatgttgataagcttacagaactaggagtaatcagctggcgcctaaatcctgataactgggagaattgcgagaacctgaagagaatccgcgaagccagaggttactcttatgtggacatttgtgatgtgtgcccagagaagctgccaaattatgaaactaagatcaagagtttctttgaagaacacctgcataccgatgaagaaatacgctattgtcttgaagggagtggatactttgatgtgagagaccaaaatgatcagtggattcgtatagcactgaagaaaggaggcatgattgttctgcctgcagggatgtaccaccgctttacgttggacaccgacaactatatcaaggcaatgcgactgtttgttggcgatcctgtttggacaccctacaaccgtccccatgaccatcttcctgcaagaaaggagtttttggctaaacttctcaagtcagaaggtgaaaatcaagcagttgaaggcttctga</cdnaseq>

Protein Sequence

<aaseq>MENEFQDGKTEVIEAWYMDDSEEDQRLPHHREPKEFIHVDKLTE LGVISWRLNPDNWENCENLKRIREARGYSYVDICDVCPEKLPNYETKIKSFFEEHLHT DEEIRYCLEGSGYFDVRDQNDQWIRIALKKGGMIVLPAGMYHRFTLDTDNYIKAMRLF VGDPVWTPYNRPHDHLPARKEFLAKLLKSEGENQAVEGF</aaseq>

Gene Sequence

<dnaseqindica>2056..2119#1884..1954#1416..1540#1191..1305#977..1071#754..865#86..103#gagagagcagcagcgagagacgaacaaaaaacagaatccatcgccataatcgaaggttcgctcttgcttccaccccgcaatccacatggagaacgaattccaggtacacgatcgatctttcccacggttttctttccgcggatttttgtttttcttttctccactgttatcttctttctctgggagcgagcagtacagcagcagagtacaggattctgcttgtttcctgtgcaatgtttctcttttgggggtttagggttggggttggtttgagttctctggcagtagagagattcttgagggtgaagtgagaaatgagagggctttttcgtgtattaggtacggatttattatagaaaggatcttcagggagattgtaattcttggaaacgacaaggatgatttgtttggctaaatcccagttattcttggaaccgttttatttcggtttctgttgtaaagcagagactaaatcagcagtcacattttcttcttaaaaaattggcacagtgcctagagaaaatctgatactcatatggaatatggatacctactgtgtaacctgacaatatgaaatctgtgtgttttcatgctcatgaatgctgattgggggttaagttcagttaggaaacgttttatgtgtcctcattttgcagacaatttattgtaagtacatcatttgtggtgtgcggtgtttaagttctggtaatcttgttgattgttgtactgttctttttccccccaaaaaaaaaggatggtaagacggaggtgatagaagcatggtacatggatgatagcgaagaggaccagaggcttcctcatcaccgcgaacccaaagaattcattcatgttgataagcttacaggtttgcacatatgtagatcagcacattgcctttgtgcattgaagctcttgttattgttgttgttgttgttcatacaagctagtaaaacatgtgtgtttctttaatatctagaactaggagtaatcagctggcgcctaaatcctgataactgggagaattgcgagaacctgaagagaatccgcgaagccagaggttactcttatgtggtttgtcctcagctcagacctgcatttgcaacatactgtgttatgttccaacatagtactgttcagtgactgtaaattcaaatatgagaactctttagtgactgctttgccctggtcaggacatttgtgatgtgtgcccagagaagctgccaaattatgaaactaagatcaagagtttctttgaagaacacctgcataccgatgaagaaatacgctattgtcttgaagggagtggttcgtatcttatcgtgttcattttatgtaattaagtgcatgttatgcagccattgaaaccgaggtcatccttctcaatataatcctgtattttgttctatgttgttaaggatactttgatgtgagagaccaaaatgatcagtggattcgtatagcactgaagaaaggaggcatgattgttctgcctgcagggatgtaccaccgctttacgttggacaccgacaactatatcaaggtactcctctaccttgtcagctttgtctgatcatcccattgcacacatcatttgtcattaattaaaaaaaaatgtgacgacgttgttccaaatgggtaattgcatcatgtgtctggtactgcctaaccaagtacatacccaatgagcaaattcatcatcaactgagatgaaattttgtgagggtttggtaactgatctactgaaggaaaaaattgctttgttgagttattccaatcaaatacatacatataatccattttttgttttttgaaatctgaactcttgcattgactcttatgaataataaacaacttattagttcattggacatattcttttacaggcaatgcgactgtttgttggcgatcctgtttggacaccctacaaccgtccccatgaccatcttcctgcaaggtaagcccaggatttcgacgtcattctcattgctgcctaccatcaatttttgtttccctccttttcttgttcctctacggagccttgctgtattctttcagaaaggagtttttggctaaacttctcaagtcagaaggtgaaaatcaagcagttgaaggcttctgagggttttgttgggctcctgcactgcggttctatattcaacctgaataagatgtgctatagcaatgtaaatttagcacagtggctatggtcgccactcaccaacttgaagtgaaagatttaatgatttttgttaattcttatgtatcaatcggcatatagcatttccgaaatgtgttttcaataaacagaaagtaagagtcatgaagctgaaaatgaacaaaatttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0419400, RefSeq:Os10g0419400