Os10g0419500

From RiceWiki
Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0419500| Description = Similar to SIPL| Version = NM_001071154.1 GI:115482051 GeneID:4348647| Length = 2637 bp| Definition = Oryza sativa ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0419500

Description

Similar to SIPL

Version

NM_001071154.1 GI:115482051 GeneID:4348647

Length

2637 bp

Definition

Oryza sativa Japonica Group Os10g0419500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15214333..15216969

Sequence Coding Region

15214627..15214755,15215313..15215552,15215644..15215738,15216498..15216576,15216683..15216694

Expression

GEO Profiles:Os10g0419500

Genome Context

<gbrowseImage1> name=NC_008403:15214333..15216969 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15214333..15216969 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcatctggtatggatgctgggggagaacggagaggagaagagcttcgagaatcccaacgagttgctgccactctccagacttgaagagatcggtgtgttgtattggcacttggatcctaagaagtctgaaagcgaagaagagctcacaaaaatccgcagagaaagaggatacagctactttgatcttactgagatatgccctgataaattggaaaattatgaggagaagctgaagagcttctattgtgagcacattcatgctgatgaagagatccggtactgcttggagggtagcggttactttgatgtccgtgacaaggatgacaaatggattcggatttggataaaagagggagacatgatcatcctgccagctgggatttatcatcggttcatcgtcgacagcaacaactatatcaagctcatgaggctcttcattggagaaccagtctggaccgcatacaaccggccacaggaagaccatcctgtgaggcaagagtatgtcaagaatgtgaagggggacaccggatttgctcttgccgcacattga</cdnaseq>

Protein Sequence

<aaseq>MAHLVWMLGENGEEKSFENPNELLPLSRLEEIGVLYWHLDPKKS ESEEELTKIRRERGYSYFDLTEICPDKLENYEEKLKSFYCEHIHADEEIRYCLEGSGY FDVRDKDDKWIRIWIKEGDMIILPAGIYHRFIVDSNNYIKLMRLFIGEPVWTAYNRPQ EDHPVRQEYVKNVKGDTGFALAAH</aaseq>

Gene Sequence

<dnaseqindica>2215..2343#1418..1657#1232..1326#394..472#276..287#agtgttccagggatctgcaatctgttgctctccactcacccgactccaaatcaactccgcaacctccctgtggctctcttcccatcaccaatctccgccacaatccgctcacaagaacacgacgaattcgagcaggacaatctttggtttctggaaccaaccagtaatccatcctcctcatcgatatatactccatacacgtccgggcaagcagaaaccaaaacggaaaagctctcggatttccccgtccccatctcgttctgttcccactagccatggctcatctggtgggtgcaagagcaagatcgatttttttttttggttcttgcaaatcttggtgattttgcggcgtgctgatgtggtgggtggttatggtgttggttcttggattaggtatggatgctgggggagaacggagaggagaagagcttcgagaatcccaacgagttgctgccactctccagacttgaaggtgatgacagtaatcccgtatctcccgttattctttctttttattcgggaaagaaaaggatgattcgtggaggcactagaaatcatcatctacttgttgatttcctgggttcttgagacctcttcctggtgaagaaatttagtcagagatgattttctgaccaaatgccccctttttgggatgggatgagaggtatattgtgagtttcacctgctgattgttgctatgctcttatatgcaactggttgaagagaggcacatgattcaactgggcaaaccatacaatgctaccttgagatttggatctgagcaactgtggtgaatttagtttgtgtggtcaaattctaacctgtttctcaaagattaattgtctttagcaaattatgtactgctattgtcaacaagagattcctctgaagtctgaatgcgtgctgcaatagcctgtcaaaaactgaacaactgtttacaatctgggaaaatacaaacaggatggcagacaaaggaggagatacattacagcttatctacaaccaacttcagttagctaggggatttgatcctacctaacgctgtctgcaagttgtttaacataccccatcaatgtaaatagtcagatagtatgaactaaccattgttcttaacttcttgagcctgtagcgatataacttagtaaagcagttgaccaaattgttcgagaatctggcctgtttttgtgctagacctgttctactgtgcaacttactgaccctatttttgcagagatcggtgtgttgtattggcacttggatcctaagaagtctgaaagcgaagaagagctcacaaaaatccgcagagaaagaggatacagctactttgtatggaactaacccctcaagagctgcaatttccttttgtccatccctctgctgtgcaccaattaatatgtgctgtattgctttttcttaggatcttactgagatatgccctgataaattggaaaattatgaggagaagctgaagagcttctattgtgagcacattcatgctgatgaagagatccggtactgcttggagggtagcggttactttgatgtccgtgacaaggatgacaaatggattcggatttggataaaagagggagacatgatcatcctgccagctgggatttatcatcggttcatcgtcgacagcaacaactatatcaaggtaggagccactaataatcttttttgtgtcactgaatcacagctacacacaactcacacaactgactatctgacttgcacgatcaatttcagaactgggacaaaggtagcataatttgaggtttaagatttatgacattttgtagaactacagaaaactttgaaatgttccacgtcccataactttgttgtcaacacacttggtaattagcctctcttattctagtcatgtaatcctcatggaccaagggaagaaagaagtaaaactaactgttatggcccctacgcaaatatgataacaccgatctagctatgtgtgtagagaatgtattgttcactcaatgctgaacatgcagatatctcaaaagctatatctctaaatttaacaaaactactgaactacataactggcattaaaacataaaacatggttcagctggtacagatttgataacactatagtttgagaaaaaaagtatgatatctcttgttttagagtttaagcaaaatatttatctgaaccctggccgatacattctgatccttttacatttgcagctcatgaggctcttcattggagaaccagtctggaccgcatacaaccggccacaggaagaccatcctgtgaggcaagagtatgtcaagaatgtgaagggggacaccggatttgctcttgccgcacattgagtttgctgaattgggggctcactatacaactgtcctatacatcacactactcatgaaatcatgaacccatgctgtttttatcatgaatcatgaaaacacatatgcagtacacttgaaaactatcatatgtagtactactatccggctatcctacaaaaattttagtactacttgaaacattgcagtatacacagtgactggtcctgtactcttgtgcaatgtactacaccaaaaattgtctataacaagtcggttggataccctaatgaaaatattgctctgtattccatttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0419500, RefSeq:Os10g0419500