Os02g0557300

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Revision as of 02:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0557300| Description = Similar to RING-H2 finger protein ATL1G| Version = NM_001053673.1 GI:115446716 GeneID:4329673| Length = 3354 bp| De...")
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Gene Name

Os02g0557300

Description

Similar to RING-H2 finger protein ATL1G

Version

NM_001053673.1 GI:115446716 GeneID:4329673

Length

3354 bp

Definition

Oryza sativa Japonica Group Os02g0557300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21962563..21965916

Sequence Coding Region

21962712..21963120,21964550..21964632,21964739..21964948

Expression

GEO Profiles:Os02g0557300

Genome Context

<gbrowseImage1> name=NC_008395:21962563..21965916 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21962563..21965916 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttgtacctccccagacccgcccgattactgctcggccgcatcgcctgagcttaagctataccaagccttcatcttctccgtgccggttttcttcacgttcgtcttgcttctcttcttctacttgttctacttgcgacggcgcagagcaaactggcagtccttgcgcatgaggactaataacttgatacggggagataaccccagattggagtgcggcataaagaaggagatgcgggaaatgttgcctgttgtggtcttcaaggagagcttcttgatcagggaaacacaatgctctgtctgcttagcagactatcaaccggatgagcggctccagagaatacctccttgtggccataccttccacatcgattgcatcgaccactggctctcgacaaacaccacttgccctctttgtcgagtatccctccttccatcccccaaaaccgccagcattgatccagtggatttggaagcacagaccgttgaagagaacagctctttggatgtacagtatcaggagggccgcattgacgagaacacgcgacaggaggatcagacattgcaacaaggtagtgagggtccaacgcatcaagctgaagaaaacgaagagacatcagtcagagtaaccactgagccccaagtagaggccgaggggtctccaagcacaacctgccggccttgtaaaacgaagaaataa</cdnaseq>

Protein Sequence

<aaseq>MSCTSPDPPDYCSAASPELKLYQAFIFSVPVFFTFVLLLFFYLF YLRRRRANWQSLRMRTNNLIRGDNPRLECGIKKEMREMLPVVVFKESFLIRETQCSVC LADYQPDERLQRIPPCGHTFHIDCIDHWLSTNTTCPLCRVSLLPSPKTASIDPVDLEA QTVEENSSLDVQYQEGRIDENTRQEDQTLQQGSEGPTHQAEENEETSVRVTTEPQVEA EGSPSTTCRPCKTKK</aaseq>

Gene Sequence

<dnaseqindica>2797..3205#1285..1367#969..1178#gcgtgtgaaagccgcttctttttttcccatcatttgctgctgctgctgcacactcctcggcgcgagcccaactccgtccctaccgcccgccccgatccggccgccgccgccgcgcattcccaaaaccccctcctctctgctcttgccctgacccccgccacggaactcctctccgccggcgtggtggtagccccccccccccccccccggcgctccggccggcggcctccggatcgcgcgatctgactttgtgctggaatccccgtcgcgtgtgatattatagctgttgcccttacctcgctgtttcggttgcggtgcggggggttagggttcttgcacaccgctgtggaattgtggatcctagcggctgggatctctctccctcggtccacccacacatgatcttcgcggggaatttggtgtggttttaccaccattacgtgtagggagactagggctcgtgttgtcgtgtgtttgttgttgttgttgttgtactagcttggaggaggctgctgctgcttgctgcttattctcgcgtggttgaccatgaaatcctgaatccccgttttgctttcgattggcgctattgaattgagttttagttttcagctatctttgacttagggaaaccaaacccaaacaaagaagctgcactttccccctactctacctcccatagcagtttgctcattttttgtttggtggcgtgcacatcactatcaaagtagtagtagtatctaaggtccatctcttcgcaagcggtcatcaatcacttaattcttgcaatgcattttgtaattcaatcatagggaatcaaggtgcggtggttaagcccatgcaatttggtaataagcactatagctcatcagtgttatagataagagatcttgtgagtgtttagggttttcgataattcggtcgaccattcgttggttcttggtggaagggagggaggttcttgtttggtgatgtcttgtacctccccagacccgcccgattactgctcggccgcatcgcctgagcttaagctataccaagccttcatcttctccgtgccggttttcttcacgttcgtcttgcttctcttcttctacttgttctacttgcgacggcgcagagcaaactggcagtccttgcgcatgaggactaataacttgatacggggagataaccccagagtaagctagcctccgcgcccttctgttgagtaacttggcttttcaggatatgttagtgtatggggattttgttgtttgatctgtattgtcttgaatatatgcgtagttggagtgcggcataaagaaggagatgcgggaaatgttgcctgttgtggtcttcaaggagagcttcttgatcagggaaacacagtcagtgatctactcctaatctctcttcaatgcagttcatatactgttgtgctagaccataaatctttctcaattgataaccacttccattaatatgtgttgcaccttttattgctccaaaatcatgaaagcacttcgatgtaggttttccgttgggtctggaccaccaatatctcaataattagttcagtaatgaatggaagtgcttctaaattagagccttgagctacatttagagaatgtttccgaagggcaatagcaagcatatcaatgccctgaggccctgaaccatatatgcagttagttaattgctaacgttatagtggatgtgtgccacttgcgcagttagaaaatatattggacaaaacaaagttattcaaatactccaatatttggaaattcttcaaaattggtgcaaggtcggtaagcttaattgatgggtgtattgcttccagctttccataacaatgtgtaaaatcctagtaatgtgtaaaattaggcttgaataaagttctgatggactttctttagaagagatgccatagagtattcgtgagcttaggtgaaattcttttgcatattatcatttgccgaattattgccaaggattttattttgtcaatagttatgtggttatatggtcatatcataatggatatgcataaacagtgcactggttggacacggtaacatatgtattgcaacttattgaatgtacatcaaaatcgcctgttgattcagactttcagaggttcacatgggctaatatgcactcaaaaaaaaaaactgaaagaacatacattagtaaggtttccaatattacccccaaccctcatccccaaaataccaaagaattgtacatgaattacaggaaggcaagatccagcccaagtgctaatattttttaacaatcacggttttcaaatttggtaaataactagaattagtctggaggaaaggacagaaagaagaaagcacttgaatacagaaaatcacatgcgagtcatcctacggatcttatgcatatggagcaacctgtaggtcactcagagttagtctgttccagaataatgttgaattttgtacagataatttactcaaatgtttgacccttattgtggtatttgatcagtgtgtagaattgttttctctgttgctcagagaaactatggatcagtagcaaaccactacaattggcatggtacctttaacacggtagatagtatattatttgcaattaccatatggcttaaaggctttcgttgagactttcttatttcacatttgtcaactggaatatatgtccatagcatagctgagttaagattgtgtgttggttaaactagaatagttgttttctgtcttctgagtactggcattttaccctgaattggttcttttgttctgaacatacaatcattcttgacagatgctctgtctgcttagcagactatcaaccggatgagcggctccagagaatacctccttgtggccataccttccacatcgattgcatcgaccactggctctcgacaaacaccacttgccctctttgtcgagtatccctccttccatcccccaaaaccgccagcattgatccagtggatttggaagcacagaccgttgaagagaacagctctttggatgtacagtatcaggagggccgcattgacgagaacacgcgacaggaggatcagacattgcaacaaggtagtgagggtccaacgcatcaagctgaagaaaacgaagagacatcagtcagagtaaccactgagccccaagtagaggccgaggggtctccaagcacaacctgccggccttgtaaaacgaagaaataaggcttctgctgatgtaccatgtcgtggcgatctgtattttagatgctcattaagagcgtataaagatgtcaggttatagatgggtaaatggtctaatctctgtattcagacagaaataatggtgatggttcatacaaaatttcagatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0557300, RefSeq:Os02g0557300