Os02g0559650

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Revision as of 02:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0559650| Description = E3 ubiquitin ligase EL5 (EC 6.3.2.-)| Version = NM_001186094.1 GI:297721320 GeneID:9272206| Length = 9166 bp| Defin...")
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Gene Name

Os02g0559650

Description

E3 ubiquitin ligase EL5 (EC 6.3.2.-)

Version

NM_001186094.1 GI:297721320 GeneID:9272206

Length

9166 bp

Definition

Oryza sativa Japonica Group Os02g0559650, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22107523..22116688

Sequence Coding Region

22116150..22116353

Expression

GEO Profiles:Os02g0559650

Genome Context

<gbrowseImage1> name=NC_008395:22107523..22116688 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22107523..22116688 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cttggcatgagaagcgcggccggcggtggaggaggcgacctcggtgcgaggagaagttgccagtgggtgtggcgcggcctacagcacacgaatgctggtcggcagggggcgccggtgcaagggtcccacatgtcgtcagaggttgagtggtggtggagcatcggtgcatcagccgtggattcgcaggtggtgagcggtgggtga</cdnaseq>

Protein Sequence

<aaseq>LGMRSAAGGGGGDLGARRSCQWVWRGLQHTNAGRQGAPVQGSHM SSEVEWWWSIGASAVDSQVVSGG</aaseq>

Gene Sequence

<dnaseqindica>8628..8831#ggggcgatctcgtctgtgttcctttgttggtctagcggcgatcggtcacgcttagcggcggccggtccggtgctagccttctcccggatttgtgtgttggcgctgtcggtgtgtgggtggtggtatattttttccttttttccggattacaaccctccacagggttgtaatcttgtaatttttcctgctcaatcaaaattaactttgcagcgtctcatgctaggcgttcaaaaaaaaaaaacgttgaaggttgaggaggccatcggtgtgagggtgtccagtgttatcccaggagtggcccaaatagctgggccatcagtgtccttgtaggcttcaattcttgtaggccttcctttgttcgtgggcctattttggagtgggctgtagctgtccgtgtagggagtgagtgggcagaaatctgatagtcaagatttggctgaaattcatattcggctcacaattcatggaacatacggagagggatgcttctcactgccatccatacatttctctttgctacttgactgatgaacaaataatttctacttaaatgtttctaatcttaaaaatgaaattgatattttctaaaatcgtaggaattaatggcgattccagttcggttctaccgatatgtacagggagatcgccttataatacttgacgacctcgccgccgtcaattccggacatgcgcggcggcggttcttgcaccggcctcggcctccggtggccgtgccggcgttgccgcctccacggcgcggatggcgacggtgacgctgacaccgtgctcgacgtcgccgtcgtcgttgtctcctccggtggcgcaggagcatgacgacgtcgaccccgccgccccttgccgcccgaagctccagagccttctcagtgacctcagccgcgccaagctcggcgacgacctcgccgccgcgtcgcgcggggtcgtcgaagccgcggattcggggatctcgatcaccagcgtgctgcggccctccgctgtcatggtcaccgcgccggcgccatggtcggacaggccgagcaggacgctcgccgggaggctcacggtgtagctcgccggcggctccggcgggacgggaggaagaggcggcggcggcacgacgacggtgaggcggcagagcgggcaggtggagtgggagccgagccacatgtcgacgcactcggcgtggaagccgtggccgcaccgggggaggaacctggcctcctcgccgtcctcgagctccgcgaggcacaccgcgcactcgacgccgtcgtcgtcctcctcctcctcctccttcgccgccgccgccgccgtgctgcggctgtacaccgtgaccggcagcgaccggagcacctccgggtcgacccctcctcccgttccaccgtccccgccgctcccagagcgccgccgcggccgcggccgccgcccgcgcccgctcgtcgacgtcgtcgtcacggcgcggcgccgctcgtcgcagtagcactggagcaggacgaaggcgagcgtgagcgccgcgaagacgatgagcacggccgccacggtggcgatgccgccggccgtcatggctgcctgccctgcaggcgcggacaccggcgacggcgacgacgacgacgaagactcgtccatggcggggccgccctgctcgacaccccgcaccataataatcgaccgtcacatgcatatgtgaccgcgcgcactcgagctcgcgtcgcatatttatacacacacacacatagcggagtagtaggctagagtggtagatggaatgagacgcggtgagatgcgagcgcaagcagaggcttcctggaagggggatgcgcgcctgcggggcttgggcggcaagtacttgtgttggtgtttgctagcgcgcgcgcattcgtcttcgtcctcgtcttccaaacgagctatcaacgtcgtccgctgttgatgttgatgcaggcaaagtggtgtttgtgcgtgggcaacttccatttggtttgggtaccactactacagaacccaaatagatgtgctggttcataacaaaccggccctaattattaattataagaaccggttacgcgtataaaccggcaccgatatgtgccggttattttaaaaaaacaatatacaccaaccggttctatttattaaaaaaaccagggcaactatattcatccggccgcgcacttcagtacctgtgaatcctcctatatgtgcttgtttatttgaaaaaaatggtacctatagttctaaaacccacacctatactaatagggattggtacctataaattggttccggctgagaaaccgacacctatagtcaactagcaccaatatgaatttctccagcagtgtatggtgagatcgagttaaatcagttttggatcaacggatgcaatgtcctctactcctctcgttcatttgcatatcgtttaaatagtatgaaaagaaataagatatattaatatgtgatatatcattttaggaacatataacttagaaaaatatgattgtgagtacatatatactggttaaagttaggttttgttgttctaaactttaacatgtatgtttgtctagtgggtatatcacatatcaatatatcttgttaatctttttaagaacttttttttaaaaaatgggactatatagtgcatgtgcactaattagggcaaactagttgtcatcctgactaaatgatggaattaacatgtagctattttatttaaagcttaggtggtaggaatatattttctacttatttgctagatgaactagtacaaattagatttttctgaacatcacatttgcagacaacatcaaatgacctgcactaattagattacatatttaatttcaaactactctcttcatccaaaaataagtttattttttacttactccacacataacaatacaaaagctaatcctattcactttatcaaatcctaaatattattgtaattgttttttcactttatctacttccaatatcgtatatatcctctacttttacaaattctagtacaacgattgcttaaagataaactcatttcggaacggatgtggcattatttcgatgatacgcaatatggagcaaaacatccccggctataatccacacttccgatggcaatatgagcagtttttaagtttttcttttggactgattgggaccggaccgccgcgggtaacgaccgaagaagagcagaaaacagcaggtggccgcgcgcatgcagacaaactccagcctccaggttaccaagatgacgcttaaaacacgcacgaggaagccatgcgtgaggcagcaggaacgcccgggcttcgtcgcgagctcgcccagtccagctgccgacacggacatctgcggtcaaaaggacaaattaacttagacacgtgaagtacttcctccatcttaaaatgtatctacctagtactttctctgttttatattataagactttctagcattgctgacattcatatgtatgttaataaatctaacatatatgtgtgtttagattcattaatatctatataaatataggcaatgctagaaaatcttataaactaaaacggaggtagtactagatatgtatctacctagtactacgaatctgaacagcctcctatccaaatttgtattactagataatgtcacatctagtacttagatagttatatcttgagacggaggtagtaataattaaggcaaaatctaaatcaagaggcctctcgttttagtgctaacgagagaccctatttgccttagtactagttcccattaagtaagtagaaaatataatcctatcacctatgtttcaaataaaattttctcttaaactactcatccgatttatgattcgattacacggttgtgttcgtaaaaattaaatctttacaacaagatctcacatgattatattttgatgaaaaactacaaattacttttatggtatatctaaattacttttagatttcactaaattacttcttacacatataaaaataattttagtagagcttaaaagtaatttacatatattatagaagtaacttaagacaaaaaagaaagtaactttgtcatgacattaaaagtagatccgttatggaggtaaaaacgtgagtctatctaaaaattaaatttaatcagcacaaattatagaattgactaaaaaggataatagaataaacaactcacaacattatgattgtataataagtaatttaatcaaatcgaaaagtaatttatatatatatgataaaagtaacttacatatataataaaattaatttacaatatagatatttcttttatcaaaatatagtcatgtaagatcttgttgtaaagatttaattgaaacgaacacaatggtgtaatcggattaaaaatcggataaataatttaaaagaaaaatctataagaagaaaaaaaatgtatcatttggtgtactagtatgcaaccaggtctaagatgagtctctggttaagacaatatagagtgcggtctctatctagtcatgtccaataattaactgtaataccaaataccaaatctaccctttcacatactgctaataccaaatctatcctttcacatactgctagtatcaaatctaccctttcacatactgctagtatatactagcagtagaatgtaccgtaaaaagtcctctaataatgttatacaggtggtgattggttgcgacgggtggaactcggtggtggccaggtacgtggggctaggcgcgccgtcgcagctccctcgtttcatcgtcctcggcttcgcgagctacccagaggggcacccgtttgggaccgagttctcgcaaatcatagcggatgattttgccgtcggacgggtgcccattaacgaaaatctgttgcatttcttcgtaagcaggagtccctcaccaggtataattaattaacctatggtttaataatggcattggcaggtaatttaattttaagcattaattaatttataaagtacacatgtgtcctgtaatattttgattcggatttacggttccttgatagtcgacgttttgataaagatgaagtcaaactttttaaaaaatttaactattaataacttttaaaaatatttagtttgatgatactaaagcaaacatatataaatttatcaaacaaagtactgtaataaaaataaaaatttgtttatttatttattgtatattactttctccgtttcacaatgtaagtcatcctaacattttccacattcatattgatgctaatgaatatatatatatatatataatggattcattaacattaatataaatatggaaaatgctataatgtcttacattgtgaaatggagggagtacaatagaaaaatatggtaaaagataggagtaatatcactgtccaaaattaagaattacggagatgagtgactaattaattaactttgtcaagaacgtgtttatcgatccaggacgtacggacgttgatgaggacgcggcgaggaagtacgtgctggagaaggtcgacgagctccccggcgaggtcgccgacatggtgcgtcggtgcgacgcggcgtcgagctggacgctgacgaaggtgtggtaccggccgccgtggcaggtggcgctcgccgggttccggcgcggcgcggtgacggtcgccggcgacgcgatgcacgccatggggcccttcatcggccagggcggctccgcggggctggaggacgccgtcgtgctcgcccgctcgctgtcgtcggcggcggccggcgatggccgggcgccgccgcgtcagcagctgcgcgacgacgccgtcggcgcggcgatagacgagtacgtcgcggagaggcggcggagggcgacgacgctgtgcctgcacagcttcgccatcgggacgttgctgacgacgaggtggctcgccgtgaagctcgcgtgcgtcgccgtcctggcgctcctcggcggcgactcgcgccgtgatgcggactacgactgcggccgcctctagcggaccatccgtttcgtttattcgcgaaacaagtcaaacgatatatttataaactaaaagtaatttgtttttatatacgtgttcttaacgatcaaaaagcaaatgctgaaaataaacttcgatgaagaaatctcaaaaccagctttaaatttaatgttgcaaattcaaaatttaggttacacacaaggaaaaaaaagcactatgacgagaatagcatctataaacacaccttgttaatttagtaattagctcctctgggtggttaatcagtgagtatcatgttgattgttgaggtaggagtgcaacagtgagtatcagtacttattagtatgcaataaatccgatgataatcttgtttcaaaagctgaacaaaaggctgtggacatcactttgatttaggaagtccccgttcccacccccaccccccgcgttgcccacgcgctagcaacacggggggtgaaaaccctagcagcgccgccaccttccctctcccccctcccccacctcatcgccgttggaaagccggcgagcgagctatgatggtggcggcggggcttcctccatggcggcgaccactatcaggcgcgggagaggcggcgaacggcggcggcccatcctggcgaggagacggtggattcggcgctgccttcgccggatctggccatcccttggctcaggggcggaactgggcctagggcagcttgggcccgggccctactcatagcaaaatcgttagtgaattaatacccatatatttctcaaatttttacaaatcctcatggtccagccctactcgtctggcctagccccacatggcctttcccaggccccaggtgtcccagtcttcccagcccagtagacagcccagtagaaaagccaaccctagtccccacctcctcagctcctctcgtcttgctctcggctctccccatcacgcagacgcagcagcgccgccgcatcccgcttgtcctcgattcctcggcatcagcgctgcgcatcggggcggaagggagcggcgcacccgtgccacagcggcgcgaatcgatggaaggaggcagcgcgcataggaggcgtgtctcggcagcggcgcgcgcattggcgtcgagccggcgacgggccgacggcagcgggctagcagcgcttccgtagttcccctttctcatccacctcgcctcaaagcttggttcaccaaatctaggtcaatgtcctctctaatctttgatgttcgatctgcatccaacatccttattcttcttttgatagcaattagtctcaattagaaattggtttgattttttagatgaagaggaatagaactttaaaatcattctaccaagtcccaatccagtgagtccacttcaacccagaaacatgagaaacaatttgtaacttgcatcatttcagcaatgaaatatttaatttggtacttgatgaaattattgttgagttaaacaatcgctttgctgaaaggtctactcggctattaagatgcattgcttgtcttgatccaaggaattcttttaccaattatgatgaagataaggtcattgaacttgctaagatatatgtggctaactttttaaatattattgtatagtgcttagagatcaacttgacacatttagttcaacttgacatatttagtttaatcttgtttttttctatacttttactgtacttcgttgtatgattagaaattgtatttcagtcttgcattttttttcaacttcgttgtatgattagaaattgtatttcagtcttgcattttttttcaacagtgtatgcattgtatggtcctcatggatagttttagcctttaatttgagccctaggcgtgtagagatcctggctccgccactgccttggctagatccggccggagcgtgggagctggcggcggcgacagcgcggcgttggcagcagaggccgccgcggcatggcggggtgcgaggccagcgcggtggcataacaagggtagcggctacgacgcgatgacacgccagcaacggcgtgatgaggcggcggcgacgatgcgatgacacgccggcgacggcgcttgcactgctgctggcggcgcccgccgcggcaaggcggtcggccactgcagaggacggcaaggcgtagtggtgggagcccctggtgcccgacggtggtcggccgttggggacgacggcgacggcgtcggtggcagccgcggcaacacccgtggtggtagcagcagtggttgacggtgcggaggcagagctcgtcgcagcggcgattgcaagcacggagctcgtcgtggcggtcgcgtcagcggctggcaggcgacagcaggtggctggacgacggtagcagcggctgttgtagcgattgtggttgcggtgggaggatgcactgtggtggcgatcgtggctgaggtgggaggaggcatggtgtcctcggacggctagccgagggcgtggaagacggctgcatctggccggcgcggcagcgtttggaggagggtcgaagattggcttggcgcggcagcgtttggaggagggtcgaagattggcttggcgcagagagaagcagctgatggcagcggaggctggctcgacgcgagatggcgcgggcggcggaaatggaggacggcttggcgcgagaggcgcatcaggtggaggaggctagcttggcatgagaagcgcggccggcggtggaggaggcgacctcggtgcgaggagaagttgccagtgggtgtggcgcggcctacagcacacgaatgctggtcggcagggggcgccggtgcaagggtcccacatgtcgtcagaggttgagtggtggtggagcatcggtgcatcagccgtggattcgcaggtggtgagcggtgggtgaaaacccagcccggccttggccgaactgacaaggatggttaattcctccttctgagggcgttgtcatgctctcacccctaaaggttggttgccgggcgaaagccaagtcttggctcctttgagccccgacggacggtggcggcggttttccgtcgcttctcttcttgaagatttcgttatggcatcccctagctatggggcgatctcgtctgtgttcctttgttggtctagcggcgatcggtcacgcttagcggcggccggtccggtgctagccttctcccggatttgtgtgttggcgctgtcggtgtgtgggtggtggtatattttttccttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0559650, RefSeq:Os02g0559650