Os02g0559800

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Revision as of 02:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0559800| Description = E3 ubiquitin ligase EL5 (EC 6.3.2.-)| Version = NM_001053684.1 GI:115446738 GeneID:4329685| Length = 1198 bp| Defin...")
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Gene Name

Os02g0559800

Description

E3 ubiquitin ligase EL5 (EC 6.3.2.-)

Version

NM_001053684.1 GI:115446738 GeneID:4329685

Length

1198 bp

Definition

Oryza sativa Japonica Group Os02g0559800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22107988..22109185

Sequence Coding Region

22108198..22109175

Expression

GEO Profiles:Os02g0559800

Genome Context

<gbrowseImage1> name=NC_008395:22107988..22109185 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22107988..22109185 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcggggtgtcgagcagggcggccccgccatggacgagtcttcgtcgtcgtcgtcgccgtcgccggtgtccgcgcctgcagggcaggcagccatgacggccggcggcatcgccaccgtggcggccgtgctcatcgtcttcgcggcgctcacgctcgccttcgtcctgctccagtgctactgcgacgagcggcgccgcgccgtgacgacgacgtcgacgagcgggcgcgggcggcggccgcggccgcggcggcgctctgggagcggcggggacggtggaacgggaggaggggtcgacccggaggtgctccggtcgctgccggtcacggtgtacagccgcagcacggcggcggcggcggcgaaggaggaggaggaggaggacgacgacggcgtcgagtgcgcggtgtgcctcgcggagctcgaggacggcgaggaggccaggttcctcccccggtgcggccacggcttccacgccgagtgcgtcgacatgtggctcggctcccactccacctgcccgctctgccgcctcaccgtcgtcgtgccgccgccgcctcttcctcccgtcccgccggagccgccggcgagctacaccgtgagcctcccggcgagcgtcctgctcggcctgtccgaccatggcgccggcgcggtgaccatgacagcggagggccgcagcacgctggtgatcgagatccccgaatccgcggcttcgacgaccccgcgcgacgcggcggcgaggtcgtcgccgagcttggcgcggctgaggtcactgagaaggctctggagcttcgggcggcaaggggcggcggggtcgacgtcgtcatgctcctgcgccaccggaggagacaacgacgacggcgacgtcgagcacggtgtcagcgtcaccgtcgccatccgcgccgtggaggcggcaacgccggcacggccaccggaggccgaggccggtgcaagaaccgccgccgcgcatgtccggaattga</cdnaseq>

Protein Sequence

<aaseq>MVRGVEQGGPAMDESSSSSSPSPVSAPAGQAAMTAGGIATVAAV LIVFAALTLAFVLLQCYCDERRRAVTTTSTSGRGRRPRPRRRSGSGGDGGTGGGVDPE VLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAE CVDMWLGSHSTCPLCRLTVVVPPPPLPPVPPEPPASYTVSLPASVLLGLSDHGAGAVT MTAEGRSTLVIEIPESAASTTPRDAAARSSPSLARLRSLRRLWSFGRQGAAGSTSSCS CATGGDNDDGDVEHGVSVTVAIRAVEAATPARPPEAEAGARTAAAHVRN</aaseq>

Gene Sequence

<dnaseqindica>11..988#gtcgattattatggtgcggggtgtcgagcagggcggccccgccatggacgagtcttcgtcgtcgtcgtcgccgtcgccggtgtccgcgcctgcagggcaggcagccatgacggccggcggcatcgccaccgtggcggccgtgctcatcgtcttcgcggcgctcacgctcgccttcgtcctgctccagtgctactgcgacgagcggcgccgcgccgtgacgacgacgtcgacgagcgggcgcgggcggcggccgcggccgcggcggcgctctgggagcggcggggacggtggaacgggaggaggggtcgacccggaggtgctccggtcgctgccggtcacggtgtacagccgcagcacggcggcggcggcggcgaaggaggaggaggaggaggacgacgacggcgtcgagtgcgcggtgtgcctcgcggagctcgaggacggcgaggaggccaggttcctcccccggtgcggccacggcttccacgccgagtgcgtcgacatgtggctcggctcccactccacctgcccgctctgccgcctcaccgtcgtcgtgccgccgccgcctcttcctcccgtcccgccggagccgccggcgagctacaccgtgagcctcccggcgagcgtcctgctcggcctgtccgaccatggcgccggcgcggtgaccatgacagcggagggccgcagcacgctggtgatcgagatccccgaatccgcggcttcgacgaccccgcgcgacgcggcggcgaggtcgtcgccgagcttggcgcggctgaggtcactgagaaggctctggagcttcgggcggcaaggggcggcggggtcgacgtcgtcatgctcctgcgccaccggaggagacaacgacgacggcgacgtcgagcacggtgtcagcgtcaccgtcgccatccgcgccgtggaggcggcaacgccggcacggccaccggaggccgaggccggtgcaagaaccgccgccgcgcatgtccggaattgacggcggcgaggtcgtcaagtattataaggcgatctccctgtacatatcggtagaaccgaactggaatcgccattaattcctacgattttagaaaatatcaatttcatttttaagattagaaacatttaagtagaaattatttgttcatcagtcaagtagcaaagagaaatgtatggatggcagtgagaagcatccctctccgtatgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0559800, RefSeq:Os02g0559800