Os02g0562300

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Revision as of 02:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0562300| Description = Calmodulin binding protein-like family protein| Version = NM_001053686.1 GI:115446742 GeneID:4329687| Length = 5174 ...")
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Gene Name

Os02g0562300

Description

Calmodulin binding protein-like family protein

Version

NM_001053686.1 GI:115446742 GeneID:4329687

Length

5174 bp

Definition

Oryza sativa Japonica Group Os02g0562300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22177806..22182979

Sequence Coding Region

22178150..22178274,22179373..22179448,22179553..22179611,22179748..22180241,22180329..22180489
,22180568..22180771,22181203..22181434,22182100..22182707

Expression

GEO Profiles:Os02g0562300

Genome Context

<gbrowseImage1> name=NC_008395:22177806..22182979 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22177806..22182979 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcggcaggggaggagcctgcagaggtcgggctcgaagcgtgtgctcgaccccaccggcggcggcggcggcgacgacgacgaccatgcggccaagcggcctcgcgtgcccgctctcgcaagtgtcattgtggaagctcttaaggtggatagtttgcagaagctttgttcatcactggagccaattcttcgtagagttgtaagcgaagaggtagagcgtgctttagccaagttgggtcctgccagaattcagggaaggtcctctccaaaaagaattgaaggacctgatgggagaaatcttcagcttaaatttacaactagattatctctaccactgtttactggtggaaaagtagaaggtgagcagggggcagcaatacatgttgttctgctagatgcgaacactggggttgctgttacttcagggcctgaatcgtgtgcaaaactggatgttcttgtgcttgagggtgacttcaacaacgaggaagatgaggattggacggaagaggagtttgagagtcacattgtcaaggagcgtgaagggaagagacctcttttgacaggtgaccttcaggtgacccttaaagaaggtgttggaaccataggggagcttattttcactgataactccagctggataagaagcagaaaattcaggcttgggctgagggttgccccagggtcttttgaaggtattcgtgttagggaggcgaagacagaagcttttactgttaaggatcacagaggggaattgtacaaaaagcactatccacctgccctaaaggatgatgtttggagattagaaaagattggcaaggatggtgcattccacaagaagttaaatgcaagtgggatttatacagttgaagattttctccagcttcttgtcaaggatcagcagaggttacggagtattcttggcagtggaatgtcaaataagatgtgggaaagccttgttgagcatgcaaagacttgtgtcttaagtggaaagcactatgtatattatgctattgactcaagaaatgtcggtgcaatattcaataacatctatgagttcactggtttgattgctgacgaccagttcatttcagcagaaaatctcactgacaaccagaagatctatgcagatggattggttaagaaagcatatgaggattggatgcatgttgtagaatatgatggcaaggcactcctgagcttcaagcagaaaaagaaatctgtcacaacaagaagtgacacggctgcagcagcaacaaacagccctgtttcctatggttcatccaacacacacaaacaattgtctcaaccagcaaaagcagggcaaacttctacaggcactacaagtgaagatggatctacaagtgcatacaatggaaatcaggcaggacgatatgcagtcaattctcaaagcatacctgcaaacgtcactacacaatatgagcggagttcactgacacctgaaagccagttcaatggttccgcactgcagaatcaagtttctaggggctccaatatactggcattgggaccaccacagcaacaacatcagcaaaattttgaattctcagcactaggtggccagtccatgcagcccaccggcttgaatcctttcgatgactggtcgcaaccgcaggagaaccggagtggggttgacgactacctgatggaggagatcaggatgcggagccacgagatattggagaacgaagagatgcaacagatgttgcggattttgagcatgggtggcgcgtcaaccaacctgacggaagacggcttcgcatttcctaactacatgccatcaactccccccaacttcaactttggggatgaccgtgcccgcccacctgggaaagccgtcgtcgggtggctcaagatcaaggcagctatgcgctggggcatctttgtcaggaagaaagctgccgagagaagagctcagcttgttgagctcgaggactag</cdnaseq>

Protein Sequence

<aaseq>MQRQGRSLQRSGSKRVLDPTGGGGGDDDDHAAKRPRVPALASVI VEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARIQGRSSPKRIEGPDGRNLQ LKFTTRLSLPLFTGGKVEGEQGAAIHVVLLDANTGVAVTSGPESCAKLDVLVLEGDFN NEEDEDWTEEEFESHIVKEREGKRPLLTGDLQVTLKEGVGTIGELIFTDNSSWIRSRK FRLGLRVAPGSFEGIRVREAKTEAFTVKDHRGELYKKHYPPALKDDVWRLEKIGKDGA FHKKLNASGIYTVEDFLQLLVKDQQRLRSILGSGMSNKMWESLVEHAKTCVLSGKHYV YYAIDSRNVGAIFNNIYEFTGLIADDQFISAENLTDNQKIYADGLVKKAYEDWMHVVE YDGKALLSFKQKKKSVTTRSDTAAAATNSPVSYGSSNTHKQLSQPAKAGQTSTGTTSE DGSTSAYNGNQAGRYAVNSQSIPANVTTQYERSSLTPESQFNGSALQNQVSRGSNILA LGPPQQQHQQNFEFSALGGQSMQPTGLNPFDDWSQPQENRSGVDDYLMEEIRMRSHEI LENEEMQQMLRILSMGGASTNLTEDGFAFPNYMPSTPPNFNFGDDRARPPGKAVVGWL KIKAAMRWGIFVRKKAAERRAQLVELED</aaseq>

Gene Sequence

<dnaseqindica>345..469#1568..1643#1748..1806#1943..2436#2524..2684#2763..2966#3398..3629#4295..4902#gctgcacaaggagcgaggcggaggaggaggcgctcactctcgcgcgcgcgcacacactcgcatcgtcgcaccgatcgcggcggcgacggcgcagatctcctccgcggcggcgtctccggcttgcgctggttcgtcgtcgtctctccggctcggtgacgcgcgcgcgggtcgctctctgttgtgctgtgatttttttattttttattttttttggtggtgtgtgtggcgttcattttttttggggattttttttgacctggatttgtggcgcagatctgaggagcggcggcggaggaggaggaggaggagacggagggggagggtagggttagggtttaggggcgatgcagcggcaggggaggagcctgcagaggtcgggctcgaagcgtgtgctcgaccccaccggcggcggcggcggcgacgacgacgaccatgcggccaagcggcctcgcgtgcccgctctcgcaaggtgatactatgatactactataaggtggtggtggtgtgtgatccggtagcagcttttgcttggatgtggtggttgggtaggggttggtgggttaggctgtaggcggctacaattgggagggaattttgggcactttgctttgctccattctccattcggactacggtcggaatgttaaatgctgttgtgaaacctcccatcccaccagcttaacatcaaatagagctgttgaattaagcttaatcctttcattagctcagcaggttaagtgtgtacttggaaccccaactcaaatgattctgtgagaacacatgcactcactaatgggagctaaaagagtgtgtcagcgtactcagggtagtactgtggtccataccgttgggtggggcttggggcttgagtgctcggtttgtgtcactgccccagctgatagcaaaaactttcagctccctgcattcgtgtctctgactcttttgttatgtgatacacgatggcaattttccgatttcgtttgggcacctttaagctccatatgcattaaagtgtcttggcctaacttatttttacaactgatgctaagcactgtatgaggcattggggttgtagatataatttctcccaaaatcaagagaacatagatgtagccatgggttatttgtatcataaaatggcattaacgaactacaattttgttgcattgagccatcttgaagttcaattagtctgtatctgtcatattgctgccatgatctattgttgatctgtcctaatccatttgtttggtatgctgaattagaacttgaaaaatgtgaaatctttatatggtaggagtgagtgcaggctgcctcagaaatgctatgcaaaattttccaaggttaaccatcaacattttgttgaattaaaaggcaatgatctcacaaccatgtaagatactaaaagagtaaatgtaatgattgctgagtggttgggatttggggaaaaaaaactataacagacgctaaattttttttgtgtatatccttgaaattgcaaaaatatgtttgtatcttagttgctcgatttagaggttgctcacttaacaaatgacacatattgcagtgtcattgtggaagctcttaaggtggatagtttgcagaagctttgttcatcactggagccaattcttcgtagagttgtgagtaaaagaactcatagcattggatgttagacatttcttttctatagagatcatacattatttctttgttgatcaatctaattcattatattctggaataggtaagcgaagaggtagagcgtgctttagccaagttgggtcctgccagaattcagggaaggtacaagatcactgtaaaacttgcttgttgtggtgatacttttggatgtgtctatgtgaatttcagttttttctacagttatggtttgagcacaacgaaaaacttaatacaataacattatacctattggaaacaggtcctctccaaaaagaattgaaggacctgatgggagaaatcttcagcttaaatttacaactagattatctctaccactgtttactggtggaaaagtagaaggtgagcagggggcagcaatacatgttgttctgctagatgcgaacactggggttgctgttacttcagggcctgaatcgtgtgcaaaactggatgttcttgtgcttgagggtgacttcaacaacgaggaagatgaggattggacggaagaggagtttgagagtcacattgtcaaggagcgtgaagggaagagacctcttttgacaggtgaccttcaggtgacccttaaagaaggtgttggaaccataggggagcttattttcactgataactccagctggataagaagcagaaaattcaggcttgggctgagggttgccccagggtcttttgaaggtattcgtgttagggaggcgaagacagaagcttttactgttaaggatcacagaggggaatgtatgtttgcaatgagttattgttttactcatactgctagatgatttgaatgttactcgttaaccatatttctattgtatcttgcagtgtacaaaaagcactatccacctgccctaaaggatgatgtttggagattagaaaagattggcaaggatggtgcattccacaagaagttaaatgcaagtgggatttatacagttgaagattttctccagcttcttgtcaaggatcagcagaggttacggagtgtaagttctacaattgttgttaataggttgtaattaatgtagtttaattgatgatcaaatacctcttttttcttttagattcttggcagtggaatgtcaaataagatgtgggaaagccttgttgagcatgcaaagacttgtgtcttaagtggaaagcactatgtatattatgctattgactcaagaaatgtcggtgcaatattcaataacatctatgagttcactggtttgattgctgacgaccagttcatttcagcagaaaatctcactgacaaccagaaggttggcatcttacttatctctttctttgttttaaagttaaaaatgcagtatcttataaatttataattttgaagtgttgtatagctgatttttggcatattaggcatgttgccacatgacactgtaaacttatgttgctgtgctgttggcagtaatgtatcaatgcacaggtctgcgtcctgcatgttcaccttgcattcagagccctatagtaatatacataaatctgtggtgcttcataactagtttttgatatcacgtttccagtggttgccacaatagaatatgcaatttgttataaattatgtgcctcttgaaggaaatgtcttcctgacaccgatatgtttcttttgaattcaactgttgtgtacccaagagctgaaaatataaataccctattgagtgcataacctggctgaactctattgcagatctatgcagatggattggttaagaaagcatatgaggattggatgcatgttgtagaatatgatggcaaggcactcctgagcttcaagcagaaaaagaaatctgtcacaacaagaagtgacacggctgcagcagcaacaaacagccctgtttcctatggttcatccaacacacacaaacaattgtctcaaccagcaaaagcagggcaaacttctacaggcactacaagtgaaggtaatatgatgttcagctcaaaatcccggtacatctatgtatgttgacaatttttatggtggtctctgctgttactatgttccctgttatgtttttgtttagcagctacattttctttgttatgttgggctctatttatcttacctaatgcgagccaagtgatttcggtttgtctttttatccatatgctcgctgacccatccctggaacgtaatgttgctgagctcctacttaatttatttatatggaattatccatctcatctggagtcactctcttgtcttcaaatttcataatcactaattcactgcaatcttcctagtgagaatagaaagatgggtagaaagtggtctatgcaattatgacaagcacatgcagagtagggcagtaggcccattgagaatgctaaaactggaacatgacaaactgtagcagcactggaagatgtgcgtacggccgtacgtcatgactacaaactgctttaactactaccattcaatacttttgttttacttattggaactcagccattgttggttggaattgatgtatgcatttggaaacatgttgatgcttctgatcatgttcaggtcagattatctgtgaacatattattgccattactaatacattgcgctactgaattcctttggtcttttcagcagatggatctacaagtgcatacaatggaaatcaggcaggacgatatgcagtcaattctcaaagcatacctgcaaacgtcactacacaatatgagcggagttcactgacacctgaaagccagttcaatggttccgcactgcagaatcaagtttctaggggctccaatatactggcattgggaccaccacagcaacaacatcagcaaaattttgaattctcagcactaggtggccagtccatgcagcccaccggcttgaatcctttcgatgactggtcgcaaccgcaggagaaccggagtggggttgacgactacctgatggaggagatcaggatgcggagccacgagatattggagaacgaagagatgcaacagatgttgcggattttgagcatgggtggcgcgtcaaccaacctgacggaagacggcttcgcatttcctaactacatgccatcaactccccccaacttcaactttggggatgaccgtgcccgcccacctgggaaagccgtcgtcgggtggctcaagatcaaggcagctatgcgctggggcatctttgtcaggaagaaagctgccgagagaagagctcagcttgttgagctcgaggactagcaaacatcctaactgctggtctaacaaagctccattggtgttgctgctgctgctgttttaaggatctgaaaaatgggcttagcagctcctgtttggaggacgcttccttgaggccctgggttcttaattatggacacggattctcgtctactctttttttgtatagttgtttcatcattgtttgtttagtgtgatgcttagttgaatcctgtacgaaccttaaccagaactgtgtacatttaattgtttcaaaattcacacaagcattcgac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0562300, RefSeq:Os02g0562300