Os02g0564400

From RiceWiki
Revision as of 02:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0564400| Description = Similar to CLP protease regulatory subunit CLPX precursor| Version = NM_001053695.2 GI:297599442 GeneID:4329696| Len...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0564400

Description

Similar to CLP protease regulatory subunit CLPX precursor

Version

NM_001053695.2 GI:297599442 GeneID:4329696

Length

5948 bp

Definition

Oryza sativa Japonica Group Os02g0564400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22283534..22289481

Sequence Coding Region

22283581..22284420

Expression

GEO Profiles:Os02g0564400

Genome Context

<gbrowseImage1> name=NC_008395:22283534..22289481 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22283534..22289481 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccggcctcctccggtggaggcgcctcgccgccgtggccacgcgggcggcgtccaccctgaccgcgccggagtgctgctccccggcggtggtggcgccgccgcaccggcgcgtgcaggaacggcgcaagtgggagggccccacctcctcctcgtcgtcgtcgtccgacgagcacgagccgcggcgcatccgcgcggaggcgcactgcccgcgctgctccaagcacatggacatcctcttctcccaccgcgcgccgccgtcctcctccgccgccgcgggcgcgggcgcgggcggcggtgggtaccaggcgctcaacctctgccccaactgccgcagcgcctacttcttccgcccccacctcctcgcgccgctccagggcaccttcgtcgagatcggccgcgtccgcgccgacctgctcccccacgacgccgtcagggccaggggcgcttccttctgggaggccatccgtgggagctcgtcgtcgcgggacgacggggacggcggcggcgtggccgtgcacgtgccgcccggcccgccgttccaccccaacctcaacgtcgtccgcgtcgccggaggcggtggcggtggcggcggcggaggaggaggaggagcaggtggtggcggtggtggtgaggagggtgcggggaaggacgggtggggcgggtcgaacctcgggaaggatttgcctacgcccaaggagatatgtcaggggctcgataagtatgtgattgggcaggacagagccaagaaggtgaggaaattttcttccaattttgttgaatttgttccagtgcacttatctcggttattattacacatcctgattaaaatcggttag</cdnaseq>

Protein Sequence

<aaseq>MSGLLRWRRLAAVATRAASTLTAPECCSPAVVAPPHRRVQERRK WEGPTSSSSSSSDEHEPRRIRAEAHCPRCSKHMDILFSHRAPPSSSAAAGAGAGGGGY QALNLCPNCRSAYFFRPHLLAPLQGTFVEIGRVRADLLPHDAVRARGASFWEAIRGSS SSRDDGDGGGVAVHVPPGPPFHPNLNVVRVAGGGGGGGGGGGGGAGGGGGGEEGAGKD GWGGSNLGKDLPTPKEICQGLDKYVIGQDRAKKVRKFSSNFVEFVPVHLSRLLLHILI KIG</aaseq>

Gene Sequence

<dnaseqindica>48..887#agactccacttcccccaatccgcgcgagctcaacctcctcctccgccatgtccggcctcctccggtggaggcgcctcgccgccgtggccacgcgggcggcgtccaccctgaccgcgccggagtgctgctccccggcggtggtggcgccgccgcaccggcgcgtgcaggaacggcgcaagtgggagggccccacctcctcctcgtcgtcgtcgtccgacgagcacgagccgcggcgcatccgcgcggaggcgcactgcccgcgctgctccaagcacatggacatcctcttctcccaccgcgcgccgccgtcctcctccgccgccgcgggcgcgggcgcgggcggcggtgggtaccaggcgctcaacctctgccccaactgccgcagcgcctacttcttccgcccccacctcctcgcgccgctccagggcaccttcgtcgagatcggccgcgtccgcgccgacctgctcccccacgacgccgtcagggccaggggcgcttccttctgggaggccatccgtgggagctcgtcgtcgcgggacgacggggacggcggcggcgtggccgtgcacgtgccgcccggcccgccgttccaccccaacctcaacgtcgtccgcgtcgccggaggcggtggcggtggcggcggcggaggaggaggaggagcaggtggtggcggtggtggtgaggagggtgcggggaaggacgggtggggcgggtcgaacctcgggaaggatttgcctacgcccaaggagatatgtcaggggctcgataagtatgtgattgggcaggacagagccaagaaggtgaggaaattttcttccaattttgttgaatttgttccagtgcacttatctcggttattattacacatcctgattaaaatcggttagttcgtgtaattaaaaacgtgaggtctttgttgaattacatcgtatctagttcttcgcttgagacactcctacgccgcatttggttgtttacgagtcgcgatggcggcgagatttagcaacaaagttattgagctagctgtgttgattgtgatgatgctttggggctttgctttcagtaaggaacaatatttacttattggcctgttaagctatctcataaaattgatatctttgcaaactggtttttaaatcaggggctcaagtgagcttctactgttttgacactatcaaggaatgattcagaacttgatttatttctttagtcaaatttgttctaatttgcaatggatgaatcacttctacatgtctacttgatagctgataacaaacacgtagttttgtacaaaatgtatatagaacattgatttggactgctgatggtgttcgcattcaaataaacccttatttccacacacttatccttggtcttcattgtccaacctaatacacttcagattccgtacataattttagtacatatagtgttaatgagagtgataaatcaagtgttggtattttctaaatatcactttctttctcaatttaatatatatttgtcatgagttgcgaaaagcttcacctcgatatatgttcttgttcatcaaactcagatgataagtcaacttcaagtcttttgcttagtgttgcattaatcaacagtaacgcctctatacttttgatatgctgatctctcacagcctgttaaatctacaggtgctatctgttgcagtgtacaatcattataaacgaatataccataaatcattacaaaaagggtcagtttctttctaccaccttagttgttcttcttgttcttggaatgatgaagctcgtctattcttgcacaagaacaattaggatcgatgaatatctttcagtgactaattatgtggtatataagctaaaacaattaggtctggagcagatttgggtggttttgatggagaagctgatgatgacgatggtgttgaactagagaaaagcaatgttctattaatggggcctactggctcaggtaagcatttgcccccaaattcaaagttgaatgttgatgtaatgggaactgtcaattatttcttctacaacactagatcaactataacagagagggcactcagcactgtttttttggatactttgtttgtttcacaggtaaaactctacttgctaagacattagctcgctttgtgaatgtgccatttgtaattgctgatgcaacaacattgacacaggcaagtctttactaacttttaaatgcataatgtccaagcacacatctttatgatttgagctcattacttgcaaaagttaaaatggtgaagccattaaactatggaaagatccattatatgccaccacgtaactgtgagttcaacatttgcccactggatgactgcatattccttccatgaacacctcttgactggggtgaagaacatgagtgaacaaattccacagccgaccaactattggctcaaagtttatacccaaacttcatttagttgcatacagctgcaataaaaccacctccattacctttgcattgggtacatcacttttataagtatgagctgccgctttgaaacatgatgatgggagttggaccagactaatgtaggtctggcttggcagcaatagagaaaatgagagaacagcatgcagggcatgtctgttagtctcatgctcataggtgctaaatggccttgcaaccttaacagagagcaatcagactgagaggacagagatttcatagaaggaagaaattgaatcctgatgccatggaaggaacacacaattattcaatggcagttcattaaattcagttattcagtgaaaactaatggaatttcccttacattaaacagcaacaagaagtatcatatacagccaccagcccatttggattaagttcagagtgatattgtgaatgatcattcatttctatttgctagcatttgcaatcttcatcagtttgttttcccctttttttaatatcatcttagttccaaaagtaaagcttaactcctgcgctttcctgcaggcagggtatgtaggagaagatgtagaatctatactatacaagttactggcggtatggttcttagcttacaaattggacctgcttattctctttacaccatgcctttgaaagtgattttggatactctattttcaatcaggtggcagattttaacgtgcaagcagcacaacaagggatggtgtacatcgatgaagttgataagatcacaaagaaggtttgtctttgttagctgaatcagtatgtcttccttggtgacattaatcagctgacgtgttcaacatgcaggctgagagccttaacattagtagagatgtctccggtgaaggtgtccagcaggctttgttgaaaatgctggaaggcacagtaagtgatttgcattgatctccttatggcctggttagcttatgtgtcttttggcatactgaatcacaatatataaagtgaaaccttaataagcagatattgcttaccctctactcctctaggatctctgtgctttggatacagattagtacatcataggtagcatcccccggcaaatgaaacaacatagtattagtagtgtgcgcgcctgttcagtagtactgatgcatgatcctttgctttatgctggaaatatttcagtttgagctttttcttgtgatattgaacacatatggtacaagtcatcaagttaaaaaaaaattatggtaatccatctagtgacctatttaaagggaaatcattttgcttatttggctgaaatatatatcatatgatctttctgggatattttacttctaagcaaatcagaacttacatggacgtcttttgatacttttgtgaaatgttgatatatttagattgtcaatgtccctgagaaaggagcaaggaagcatcctcgcggtgataatatacaggtactgtcacagtttatatattacaatcttcaaaaataaaatatttagcctttttgtgccggaataattacaccatatcatttttatcttctgctgaatgatagccccaagaaaaatacggcaagataagagttttgggtgttccatgactgacaatagtaatagagaacaattcctttgtctgaaatatccatcccctggataggtctcatcccaaatgctgctttatatgaacatactattgttcctttataccataaatgcctggtctaaactagtgcaatttcagattaccaactgcccagtaaaaccttgagtttgtttttctactcgttcagtgcttgtggtatgcacacatggattaacttcaattgtataatggtcttcatgccatacagatagatacaaaggacattctttttatttgtggtggtgcttttattgacttggagaaaactatatcagagaggtattgcatattgatctttgagacttacctattggaacaattgtctccaatgttttctcaaatcgtcatctaatgtatttgcacctgctttaatttttaaaaatcaggcggcaagattcttctattggctttggggcacctgtccgtgctaacatgagggcaggtggcatctcaagtgctcaagtgacatcatccttgttggaatcagtaagcaccaaaattccgagtttaacattttttggaaatctcctttgtttaaggagaatgcatgtgtgaattcagtgaaattactgtgtaaaaccttaaatctaggtgtttaaactgttcatttcttaggttgagagtggcgacctaatagcatatggacttattccggaatttattggacggtttcctatccttgttagcttggcagctctaaacgaggaccagcttgttcaggtaatccaatcatgtactgtttttctacctagcatcatcttgtgatttatttatgatatcttaccatgataaagcttatagaatgctgtaagatatttatagattttaccatggagcactgatacaatcatgttctgttaggttctcatggagccaaaaaatgctctgggtaaacaattcaagaaattattcagcatgaataatgtgagtatatctgtaatagaaccatgcaaattaatgtccccttggtatctcatctcaaccccaactgtggctttcaggtcaagcttcattttacagatgctgcacttagaataattgccaagaaggcaatgtccaaaaatacgggtgcacgtggtttaaggactatccttgagaatattctcatggatgctatgtacgaggtttgttatgtgacaaattttcttcctttatattgactttacagtgtagacataaactcaatgaggctgacaccgttctttttatgttttgctgtgccttgcagattccagatgcaaaatctggtgagaagcgaatcgatgcggtggttgtagatgaagacgcagtcggagcagtggaccaacctggctgcggagctaagatcctttatggcgatggtgcttttgaacgttatctctcccagataaaggtaaggattcttaattctacaaactgatggatgcatatgcatataatctgcaactataatattccttggggaaaatactgcaggtagcaggggatgcagcgggaagcgaagcggatggagaagccgagctttcctcttcaagagccatggggatgtgatttattggttctcacatctcctgtataaccctgtaaaatctaatcccagatgtaataatgtaagtattagccttgtaaaggaatattgtgtgtagtgtctattgctagttaaaaaggctccagcgcaatgttcagcacccccacgctctttacttaatttgcagcagggtttggaaagagtatatagctcaggggatatttatgggtgtcgtacagacaaccctggttgtcatgaaaatgtaatgtccaagaattgtgatgactgctgatggatgtaaaaaaaaaacttagaaacaatgaaacgcattgaaagggggaaggaaatgccaataatgctgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0564400, RefSeq:Os02g0564400