Os02g0564500

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Revision as of 02:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0564500| Description = SFT2-like family protein| Version = NM_001053696.1 GI:115446762 GeneID:4329697| Length = 2729 bp| Definition = Oryz...")
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Gene Name

Os02g0564500

Description

SFT2-like family protein

Version

NM_001053696.1 GI:115446762 GeneID:4329697

Length

2729 bp

Definition

Oryza sativa Japonica Group Os02g0564500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22290116..22292844

Sequence Coding Region

22290391..22290469,22290776..22290834,22290932..22291049,22291474..22291547,22292318..22292371
,22292522..22292653

Expression

GEO Profiles:Os02g0564500

Genome Context

<gbrowseImage1> name=NC_008395:22290116..22292844 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22290116..22292844 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacacgatgaggggggcgctggagcgggcgaggatgctggtggggatggaggtggacgaggagtcggcgccggaggagcagtccttcttcgacgacgtcacccgcaactgcgccctcaccaccacccagaggctgtacggcttcgcgatatgcttggctgccggattgacgtgcaccttcttgtcaatgcttgttttcttcaatcctgtgaaattcggggtaacattcacccttggcaatttgatggcacttggaagtacagcgtttcttataggtcccaaaaggcaatttgacatgatgcttgattctgtgcggatatatgcaactgctgtatacattgcaagcatcataattgctctgttctgtgctctctttgtgcacagcaagctgctgactctacttgccattatcttggaatttggtgctcttgtttggtacagtctaagctatataccctttgcacgctcggttgtttcgaaggtgatgacgtcttgcttcgacactgaattctag</cdnaseq>

Protein Sequence

<aaseq>MDTMRGALERARMLVGMEVDEESAPEEQSFFDDVTRNCALTTTQ RLYGFAICLAAGLTCTFLSMLVFFNPVKFGVTFTLGNLMALGSTAFLIGPKRQFDMML DSVRIYATAVYIASIIIALFCALFVHSKLLTLLAIILEFGALVWYSLSYIPFARSVVS KVMTSCFDTEF</aaseq>

Gene Sequence

<dnaseqindica>2376..2454#2011..2069#1796..1913#1298..1371#474..527#192..323#tgactctactagtcgagtcgtcttcatcttcgagaagggagaaatttcagagagattttttatttatttatttttggattttgggatcggcggccgacgctgtcgagtaccggagtaggggagctcgccggagtaagctcttctcaggctgtgcgggggtggcggagggcggcgcggcgcggcgagggggcatggacacgatgaggggggcgctggagcgggcgaggatgctggtggggatggaggtggacgaggagtcggcgccggaggagcagtccttcttcgacgacgtcacccgcaactgcgccctcaccaccacccaggcaagctccatccccaccccacccacccagcccggatcgatccgggttcctcgctcagatctggtcgacgcgagtagtgattgttctagcaaatgcggttgactgatcgtgctgaaatcctggtgcttgttttttggaatctcggtgcagaggctgtacggcttcgcgatatgcttggctgccggattgacgtgcaccttcttggtaagtttcacagtttgatgctgtacatatctgtttgtttccacttcagggtgattttttttttggtacaaagtaatgtagggagcaatgagattccatgctttctgacgattgacgatacttcatccttgcagtatgttaatgcagccgtagtttgattcatgttgttcgaattgtcgtaatgccgcgtttttggtcttggactctcagttcaatatatctgattgccgtagacatgcttcacacagttagcagtaaccatcctttttcaatagtaggacagggtgcataattgttccccatgctttttttaacataaagttctcaaaccattttctatggtactgtttttgcctttgggagcgcaaataaatacctcaaatgttggaagctgtgtaatttccgtgcagcgtacaacagttagtagtactaatacttgtatcacatgatatttctgatgatctagctgtggcagaacaagaaaaacacacaataatatatttttagataatgggaaacacacaataatatatacatgattgtacttcacattttacttgggtttcatctctagtctagttcctgcagcctactctagcttgtttgggactaaagggtatccttttttttgggcaactttactaagggctgttcttattatattgttggttattcttcagattttctctgtctaccaatttttgttgtgtttgattttcatttccctccagccactgtgggttatttgatatttttgatctccattgcagtcaatgcttgttttcttcaatcctgtgaaattcggggtaacattcacccttggcaatttgatggcacttggaaggtctgtttcaaagttccatttaatataccatcttactctattttcaagttattttattacttgcctttggacaccagtaaaatcagaatgatgtaaacttcaagaaatatgggtgttgttcacattcgcatatcaatgcaaacatacaaactctattgctcttcatataatcatattctcatcttggatgctcttttttttcttttcttatagatggggtttcaacttgttgaattatgtctacataaatgttaacctgtactttaactttgccatggtatgatattttccgttacaaaaatactatgtgtacatgcttacaagactgtaatattctgccatttctccgctaggtatttatctttgaagccaccaagtctttttttactcatgtcaactaatgatgggatcatttgtttggcagtacagcgtttcttataggtcccaaaaggcaatttgacatgatgcttgattctgtgcggatatatgcaactgctgtatacattgcaagcatcataattgctctgttctgtgctctctttgtaagacaattttaaatttaacaggtgtaaattagttttgtatcatgcttcaatttaattgtataatatgctaaatggctctattttttatttacaggtgcacagcaagctgctgactctacttgccattatcttggaatttggtgctcttgtttggtaagttgaatagcttccactggatggtttttagtcatctgtttaactaggataatggcataacttttgactccagctagccagccgctcaaacatgtttcgtactgtatttctaattttctgtacatgaataggtgatgctgtaaatcgccaaagtaatattgcctcattctttaacatgggctgaaacactttacgggctataaatgggatagcagcatataaacccaatatagggttaattataagtgtcgcacgatcacagggatagaactattctcaagctataaatgttggtatttgcaggtacagtctaagctatataccctttgcacgctcggttgtttcgaaggtgatgacgtcttgcttcgacactgaattctagaatgaccatcctgatctacatgttgttgctggacgcatagatgatatatctgtaatatactgtgtattttgatggagaagtggagtgggggtcatcttctccgattagcctgtgtagtcattctgatgttgtgaagacacacggatttgtgcgtcttatgctcagagatcatgtcatcttttcctcacttcccccccttcttccccacatttgtacatggtaaccacttacactccgcattcgaacgtttactgtgcagtttgtttggattgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0564500, RefSeq:Os02g0564500