Os10g0420200

From RiceWiki
Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0420200| Description = IQ calmodulin-binding region domain containing protein| Version = NM_001071157.1 GI:115482057 GeneID:4348650| Length...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0420200

Description

IQ calmodulin-binding region domain containing protein

Version

NM_001071157.1 GI:115482057 GeneID:4348650

Length

2070 bp

Definition

Oryza sativa Japonica Group Os10g0420200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15241937..15244006

Sequence Coding Region

15242323..15242742,15242827..15243072,15243136..15243191,15243564..15243864

Expression

GEO Profiles:Os10g0420200

Genome Context

<gbrowseImage1> name=NC_008403:15241937..15244006 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15241937..15244006 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaaggcggggaggtggctgaggagcttcttggcggggaagaaggatgggggtgggaggagatcaggggagaggcagcagcacggcggcggcgacgcgacgccggcggtggaggtggcggcggcgagtaccagggagaagaagcggtggagcttccggcggtcgtctgcgtcggcgtcggcggcggcgatggggaagccggccgcggtcacggcgccgtcgacgccggagccgagcgtgtccgggctcgcgtcggtgtcggagcgggcgcgcgacgtcgctgatctcgaggggcagagcaagcacgccatggcggtcgccgccgtggcgaccgcggcggagggtgacgacgtgtcggcgagcgccgtcgaggtggtcgccgccgtcatgatccaggccacctacagaggctacctggcgaggaaggcgctgtgcgcgctgagggggctcgtgaagctgcaagcgctgatcagaggcaacctcgtgaggaagcaggccaccgccacgctccgccgcatgcaggcgctgctcgtcgcgcaggcccgcctccgcgcacaacgcatgcgcatgctcgaggaggaagaagacgacgacgtccatggccacggccaccaccaccaccgccggtcatcgccgcaccacccccggcaccgccgctcctacgagatggacaggtcgggcgaggagcaggccaagatcgtggaggtggacgtgggtgagccgccgccgccgcacttcgagcggcagcccagccgccgccgcggcggcggcgtgccgaggagcgtcaagatgcagcgttcgtcgtcgcacgtcggcgttccggcggcgcacggctaccaccaccaccacctctacagctacgggcagtatccatggtcggtgaagcagctggacagatcgagcgcgtcgctcaaggacagcgagtgcgggtcgacgacgagctccgtcctcaccgccgccaccaccgtcggctactgccgctccctcgtcggcttagacctccacaggggccactactga</cdnaseq>

Protein Sequence

<aaseq>MGKAGRWLRSFLAGKKDGGGRRSGERQQHGGGDATPAVEVAAAS TREKKRWSFRRSSASASAAAMGKPAAVTAPSTPEPSVSGLASVSERARDVADLEGQSK HAMAVAAVATAAEGDDVSASAVEVVAAVMIQATYRGYLARKALCALRGLVKLQALIRG NLVRKQATATLRRMQALLVAQARLRAQRMRMLEEEEDDDVHGHGHHHHRRSSPHHPRH RRSYEMDRSGEEQAKIVEVDVGEPPPPHFERQPSRRRGGGVPRSVKMQRSSSHVGVPA AHGYHHHHLYSYGQYPWSVKQLDRSSASLKDSECGSTTSSVLTAATTVGYCRSLVGLD LHRGHY</aaseq>

Gene Sequence

<dnaseqindica>387..806#891..1136#1200..1255#1628..1928#agcacacacagtgtcagtacacacactagcttctctcaccggctctccgccatcttctcgtcctgtatgtgtagtttaatggcgaaagattctgacagccaagcttttagctcgtactcgtagctcgtagctcgggaatttaggatccccacctccacgttccttcctcccgatcctcctctcctcgctcacatcacatcacatgccggcccggctcgccattgatcacctctcgtgttgactgagaagcgtttgtactgtgtggtggttggtgattgggtgttgtgccggtcatcttctccctcgccggcgagcgcttatatagtcgtccctgcttctgctgctgtcgtgtgagcgagcgatcttggtgaggttttctcttggcgatggggaaggcggggaggtggctgaggagcttcttggcggggaagaaggatgggggtgggaggagatcaggggagaggcagcagcacggcggcggcgacgcgacgccggcggtggaggtggcggcggcgagtaccagggagaagaagcggtggagcttccggcggtcgtctgcgtcggcgtcggcggcggcgatggggaagccggccgcggtcacggcgccgtcgacgccggagccgagcgtgtccgggctcgcgtcggtgtcggagcgggcgcgcgacgtcgctgatctcgaggggcagagcaagcacgccatggcggtcgccgccgtggcgaccgcggcggagggtgacgacgtgtcggcgagcgccgtcgaggtggtcgccgccgtcatgatccaggccacctacagaggctacctggtgagctcaaaaagcactaattcattccgcacccattcgatcgaaatttgggcgaaatttgagagaatttgtggaatgtgctaggcgaggaaggcgctgtgcgcgctgagggggctcgtgaagctgcaagcgctgatcagaggcaacctcgtgaggaagcaggccaccgccacgctccgccgcatgcaggcgctgctcgtcgcgcaggcccgcctccgcgcacaacgcatgcgcatgctcgaggaggaagaagacgacgacgtccatggccacggccaccaccaccaccgccggtcatcgccgcaccacccccggcaccgccgctcctacgtaagccgcgcgcgcctcccctcgcgccgccgtggaaacttttcttatgtacacgctttgcaggagatggacaggtcgggcgaggagcaggccaagatcgtggaggtggacgtgggtgagccggcgccgccgcggcgggggcggagcagctgctcggtggcggcgagcgagtcgagggaacggcggatggcggagtacggctactacgcgcagtgctcccccgcgccgtcgtcgtcggcgttcacggcggcggccgcggcgagcccgccgcgcgacgcgtcgtacagcggccacttcgacgacttctcgccgttcgagccggccaccgcgcggagcagcccgtacattccgccatcccccggcggcggcggcggcggcggcggcggcgagttcttccccaactacatggccaacacgcagtcctcccgcgccaaggcgcgttcccagagcgcgccgaggcagcgcaccgagcctcacctcccgcagccgccgccgccgccgccgcacttcgagcggcagcccagccgccgccgcggcggcggcgtgccgaggagcgtcaagatgcagcgttcgtcgtcgcacgtcggcgttccggcggcgcacggctaccaccaccaccacctctacagctacgggcagtatccatggtcggtgaagcagctggacagatcgagcgcgtcgctcaaggacagcgagtgcgggtcgacgacgagctccgtcctcaccgccgccaccaccgtcggctactgccgctccctcgtcggcttagacctccacaggggccactactgatcgaccaaacacttgctcgctcgccgatttccgtcaaagtttgtataaatttcaatcaatttcgagttgttttttgagcaaattcttgtcaaacgattccgtgttccaactgttgatagagatgtgagcaacacaacgtgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0420200, RefSeq:Os10g0420200