Os02g0566400

From RiceWiki
Revision as of 02:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0566400| Description = Conserved hypothetical protein| Version = NM_001053706.1 GI:115446782 GeneID:4329709| Length = 2967 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0566400

Description

Conserved hypothetical protein

Version

NM_001053706.1 GI:115446782 GeneID:4329709

Length

2967 bp

Definition

Oryza sativa Japonica Group Os02g0566400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22383751..22386717

Sequence Coding Region

22383785..22384660,22385799..22386135,22386263..22386399

Expression

GEO Profiles:Os02g0566400

Genome Context

<gbrowseImage1> name=NC_008395:22383751..22386717 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22383751..22386717 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaagacgcgccgccgtcgtcgcttccgctgctgctgccgcggaagtcgttgtcctcgtcctccgcgcagcgcaagcagcagtacgcgcggtgcgtgtcgcacgctggggacgagctccacagcttccgctcctgcctcgcgtggatgtgcgtcgaccactccacccgcgcccgcggcgccgcgtcgtgggcggccttcctcctcctcgccgtcgccgccccgtccgcggccaccctcgcgctcccctccccggtcggcggcggggggtcgccgttcgacgggcaggtccaggtgtcgctcaccctggccgccgcgctcgcctacctcaccctcacggcgctcctccagggccgcggcctccgccgcctgctctacctcgaccgcctccgcgacgactccgaggaggtccggtccggctacatcgaggagctcgcgggctccttccgcgtcctcgcctgcttcctcctcccctgcacgctcgccgaggccgcctacaaggcgtactggtacctcgccgcgccgccgttccgctccccgtggtggtccgccgccgcgtgcgccgtcgaggtcgcctcctgggcctaccgcaccgccgtcttcttcatggtctgcgtcctcttccggaccatctgctacctgcagatcctccggatgaagggcttcgcgcgcgagttctgcaggttcgccgacgtcgccgccgtgctcgagagccaccgccgcatcaggaagcagctccacaggatcagccaccgctaccgccgcttcatactctgctgcctcgtcctcgtcaccaccagccagttcgccgccctgcttgccaccaccaggccgcacgcgcagatcaacctcgccaccgccggcgagctcgcgctctgctcgctgagcctcgtggccgggctgctggtgtgcctccagagcgcggcgaagatcacgcacaagacgcaggcgatcacgagcgtggcggcggggtggcacgccgacgccaccatcaacgccttcgacaacgaccaggaggaccccaacccggacctcccccgcatcgtcggctacctggtgcccgtgaacgcctactggatggcctccggcgagtcctcgtcggactcctcctcctcctcctcctccagcgacgacgacgactccggccaccccaagtccaagtacatccctttccagaacaaccactgcttccagcagaggcaggcacttgtgacgtacctggagaacaaccgggccggcatcacggtgtacggcttcgtcgtcgaccggacgtggctgcacgcgctgttcatgatcgagttctccctcgtcatgtggctgctggggaagacggtcggcatatcctga</cdnaseq>

Protein Sequence

<aaseq>MAEDAPPSSLPLLLPRKSLSSSSAQRKQQYARCVSHAGDELHSF RSCLAWMCVDHSTRARGAASWAAFLLLAVAAPSAATLALPSPVGGGGSPFDGQVQVSL TLAAALAYLTLTALLQGRGLRRLLYLDRLRDDSEEVRSGYIEELAGSFRVLACFLLPC TLAEAAYKAYWYLAAPPFRSPWWSAAACAVEVASWAYRTAVFFMVCVLFRTICYLQIL RMKGFAREFCRFADVAAVLESHRRIRKQLHRISHRYRRFILCCLVLVTTSQFAALLAT TRPHAQINLATAGELALCSLSLVAGLLVCLQSAAKITHKTQAITSVAAGWHADATINA FDNDQEDPNPDLPRIVGYLVPVNAYWMASGESSSDSSSSSSSSDDDDSGHPKSKYIPF QNNHCFQQRQALVTYLENNRAGITVYGFVVDRTWLHALFMIEFSLVMWLLGKTVGIS</aaseq>

Gene Sequence

<dnaseqindica>35..910#2049..2385#2513..2649#gaaggccagccaaaggaaaggagaaagcgcggccatggcggaagacgcgccgccgtcgtcgcttccgctgctgctgccgcggaagtcgttgtcctcgtcctccgcgcagcgcaagcagcagtacgcgcggtgcgtgtcgcacgctggggacgagctccacagcttccgctcctgcctcgcgtggatgtgcgtcgaccactccacccgcgcccgcggcgccgcgtcgtgggcggccttcctcctcctcgccgtcgccgccccgtccgcggccaccctcgcgctcccctccccggtcggcggcggggggtcgccgttcgacgggcaggtccaggtgtcgctcaccctggccgccgcgctcgcctacctcaccctcacggcgctcctccagggccgcggcctccgccgcctgctctacctcgaccgcctccgcgacgactccgaggaggtccggtccggctacatcgaggagctcgcgggctccttccgcgtcctcgcctgcttcctcctcccctgcacgctcgccgaggccgcctacaaggcgtactggtacctcgccgcgccgccgttccgctccccgtggtggtccgccgccgcgtgcgccgtcgaggtcgcctcctgggcctaccgcaccgccgtcttcttcatggtctgcgtcctcttccggaccatctgctacctgcagatcctccggatgaagggcttcgcgcgcgagttctgcaggttcgccgacgtcgccgccgtgctcgagagccaccgccgcatcaggaagcagctccacaggatcagccaccgctaccgccgcttcatactctgctgcctcgtcctcgtcaccaccagccagttcgccgccctgcttgccaccaccaggccgcacgcgcagatcaacctcgccaccgccggcgagctcgcggtaaatcttccttttctgctcctccttttttttttacttccattccgatttatgttaaaaggtaagcagtaattgcttccttcaccgagaaatcaaggtgatgcgattaccgatttggtatgaagatatcagtagcatcatgaacgatctgaatcagaaatatgcattgttcaaagatgcgattcactgcataattagtagtagcatttagcagtaagtaatcactacaaatttatctcttcaagataggaaaatgattcggtggaaatggaaaccgcaattggatacatgtaaaattgggacaggaatgatgagaaggggctgaatcgaagcagtttttagtaactgttaattctgctctatccctgtttctttctacaagctcagaaatatgaattccgctgttggggatagtgaaaatgccagatcaggttgagcaaggtcaagtggctactggctagccacactgtaagtaaagttagtcctagaagaagcttgcacgccctgaaaaggaagcacaaatgttcagataactctagaagtagaacagaacagtgcatgaacctccaccacccaccacatgtccacagcagacaactagatccacattcccatcaccactccatcagtagttgtctgtgtctcaaaagggctatacagctagctagatttgtattgcaaaatgttaaaagagacaaattccctggtagatgcttgaggaaatgcatattcctgaagttgaatatagaatgttatccttcaaaagtaagatcaggaagaacaattaggttgcaaaatggaatgttggaatttctgataaaactgaagtatattttatagtggtcattcagtgggcctttttttttataatggataaaacttggtctttgtttcagccatctgttccttgagaatcattttccatattaaacataactcaatgtgtttgctctgatagttaacccaggaacccagcagtaaatccctgcgttcatcgtgaactctgatttttaccgtgagacttggaagtttttgccgggggacttggaaattttcattctgtcagccactggcttcagtggcctcggtctgagactcgagtacctgacatctgtttgtcgcttcacatgttgtgcagctctgctcgctgagcctcgtggccgggctgctggtgtgcctccagagcgcggcgaagatcacgcacaagacgcaggcgatcacgagcgtggcggcggggtggcacgccgacgccaccatcaacgccttcgacaacgaccaggaggaccccaacccggacctcccccgcatcgtcggctacctggtgcccgtgaacgcctactggatggcctccggcgagtcctcgtcggactcctcctcctcctcctcctccagcgacgacgacgactccggccaccccaagtccaagtacatccctttccagaacaaccactgcttccagcagaggcaggcacttggtaagcgctcacaacaaaacaaaacaaacaaacaaaagaacaaacaaacatatgtgaaagctgcatttcatttcatcagttcgtcctgacctgatcgatgtggtggtggtggtgttttttttgtcagtgacgtacctggagaacaaccgggccggcatcacggtgtacggcttcgtcgtcgaccggacgtggctgcacgcgctgttcatgatcgagttctccctcgtcatgtggctgctggggaagacggtcggcatatcctgaggcctgaaggagcttttgcctcctgttgaagctttcagctctctctctgctctgcagccgtgccgagatttctgatgatcaaagatctctgcatcgtctcatattgcttcctggattgtacaatacaaaatcgagtgcagaaattgcagataatagttcagtttctgtgccatgtccggcacaaaaacgaagcaacagttctgaagtttttagctgtatgtttttctttaaaaatttttatggttctttgtttgaggcagattctgatggagcattagttgtatgaaaaataatgggatgggatagttgtccagcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0566400, RefSeq:Os02g0566400