Os10g0420400

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Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0420400| Description = Similar to Sulfate transporter 3.1 (AST12) (AtST1)| Version = NM_001071158.1 GI:115482059 GeneID:4348651| Length = 2...")
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Gene Name

Os10g0420400

Description

Similar to Sulfate transporter 3.1 (AST12) (AtST1)

Version

NM_001071158.1 GI:115482059 GeneID:4348651

Length

2158 bp

Definition

Oryza sativa Japonica Group Os10g0420400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15255350..15257507

Sequence Coding Region

15255405..15255569,15255680..15255796,15255904..15256030,15256157..15256443,15256578..15256768
,15256882..15256967,15257096..15257172,15257280..15257468

Expression

GEO Profiles:Os10g0420400

Genome Context

<gbrowseImage1> name=NC_008403:15255350..15257507 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15255350..15257507 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcgatcaaagctgatttatttattttttgtaataatctgttgtacattcagagcaagaggaagcctaagtggttcttgctatcagcgatggcgccgttggcgtcggtcatcgccggaagcgttctggtctacctcatccacggcgaccgccatggcatcccggtgattgggtacctgaagaaggggataaacccgccgtcggcgcgcgatctcctcctgtcgtcgccgcacacgatggtcgctctcaggaccgggatcatcaccggcatcatcggcctcgccgagggaatcgcgatcgggaggagcttcgcaatgctgaagagctacaatgtcgacgggaacaaggagatgatcgccttcggggcgatgaacatcgtcggctcctgcacctcctgctacctcacagctggcccgttctcgagggcggcggtgaaccacaacgccgggtgcaagacgccgatgtcgaacgcggtgatggcggtggccgtgatgctgacgctgcagttcctgacgccgctcttccactacaccccgctggtggtgctctcggcgatcatcatctcggcgatgatcggcatcatcgactacaaggccgccgtccggctgtggaaggttgacaagatcgacttctgcgtctgcgtcggcacctacctcggcgtcgtcttcggcgacatccagatcggactcgccattgcagttgggatatcgattctccggatcctattgttcatcgcacggccgaagacgacagtcctcgggaagatgccaaactcgacgaacttcaggaggatggaccagtacaccgtggcgaaggccgtgccgggattgctcgtgcttcgcatcgactcacctatctacttcgccaattcaggctacctgcgagagaggatcatgcggtggatcgaccacgaggaggaccggatcaaggccgagggtctggagagcttgaagtgtgtagtcttggacatgggtgccgttgccagcatcgacacgagcggcacgaagatgttggaagatctcaagaagaacctagacaggagtagcattcagattgcgctggcgaacccggggagtgaaatcatgaggaaattggacaaatcaaatgttctcgggctcatcggagaggagtggatcttcctgacagtgagcgaggcatgctactatgcgcagcaaaactgcaagataggagtaggaatgggtgtagtacaatgtgtagtagatcctgaacacatggtctga</cdnaseq>

Protein Sequence

<aaseq>SIKADLFIFCNNLLYIQSKRKPKWFLLSAMAPLASVIAGSVLVY LIHGDRHGIPVIGYLKKGINPPSARDLLLSSPHTMVALRTGIITGIIGLAEGIAIGRS FAMLKSYNVDGNKEMIAFGAMNIVGSCTSCYLTAGPFSRAAVNHNAGCKTPMSNAVMA VAVMLTLQFLTPLFHYTPLVVLSAIIISAMIGIIDYKAAVRLWKVDKIDFCVCVGTYL GVVFGDIQIGLAIAVGISILRILLFIARPKTTVLGKMPNSTNFRRMDQYTVAKAVPGL LVLRIDSPIYFANSGYLRERIMRWIDHEEDRIKAEGLESLKCVVLDMGAVASIDTSGT KMLEDLKKNLDRSSIQIALANPGSEIMRKLDKSNVLGLIGEEWIFLTVSEACYYAQQN CKIGVGMGVVQCVVDPEHMV</aaseq>

Gene Sequence

<dnaseqindica>56..220#331..447#555..681#808..1094#1229..1419#1533..1618#1747..1823#1931..2119#atctttaatttagctagtcaagaaaacccaatgttctgaatttctgatgctctgatcgatcaaagctgatttatttattttttgtaataatctgttgtacattcagagcaagaggaagcctaagtggttcttgctatcagcgatggcgccgttggcgtcggtcatcgccggaagcgttctggtctacctcatccacggcgaccgccatggcatcccggtggtgagcacgagcaaaacaaaagatctcatcactttaatttccaagaaacataacgcatttgcactgatcagtagtgataaaaatgtgactgaatcatgaacaattaacagattgggtacctgaagaaggggataaacccgccgtcggcgcgcgatctcctcctgtcgtcgccgcacacgatggtcgctctcaggaccgggatcatcaccggcatcatcggcctcgccgtaagcagccgcttcactctttcagctgaactccattttcgtcagaaatgacatcggctatgtcagacaactcaccgagcttgtaacgtgtctgcataaaattgcaggagggaatcgcgatcgggaggagcttcgcaatgctgaagagctacaatgtcgacgggaacaaggagatgatcgccttcggggcgatgaacatcgtcggctcctgcacctcctgctacctcacagctggtatacaagagatttttcttcttctcttccgtaacaaattagttactgttatgtttccgacaaaaatctctgtgagctcttactgatcactgtatcgatccgatctccatggctggcgtggtgtaggcccgttctcgagggcggcggtgaaccacaacgccgggtgcaagacgccgatgtcgaacgcggtgatggcggtggccgtgatgctgacgctgcagttcctgacgccgctcttccactacaccccgctggtggtgctctcggcgatcatcatctcggcgatgatcggcatcatcgactacaaggccgccgtccggctgtggaaggttgacaagatcgacttctgcgtctgcgtcggcacctacctcggcgtcgtcttcggcgacatccagatcggactcgccattgcagtgagtagcacatgctccgaagctttctctagtctgagctgagctgaacaagactgacatcatcatcatacttctctgaagcttgtcgttctgaacatttgtgatcaaacttgtggttttgtgcgattttgcaggttgggatatcgattctccggatcctattgttcatcgcacggccgaagacgacagtcctcgggaagatgccaaactcgacgaacttcaggaggatggaccagtacaccgtggcgaaggccgtgccgggattgctcgtgcttcgcatcgactcacctatctacttcgccaattcaggctacctgcgagagaggtgtgtaaaaagagagtaaatgctacagtgcatttgcactgtacaatatctgacaaacatattttgactggagaatctcatgtttgacagcaaatttctggtgttgtgttcaggatcatgcggtggatcgaccacgaggaggaccggatcaaggccgagggtctggagagcttgaagtgtgtagtcttggacatgggtggtaagttcttcttgtacagctggactgaaataatacacatatctgaactctgaaacactgaacctgaaataacttgttcatttgggaatttctgcatgagggctgatcaaccaatgtctttcctgcagccgttgccagcatcgacacgagcggcacgaagatgttggaagatctcaagaagaacctagacaggagtagcattcaggtaaggaggagcaaactaatagctgcattagcacctcaaattgcttaaaatctctggtttcaaggcttatatatcacctgaattactttctgatgttgtgtctgcagattgcgctggcgaacccggggagtgaaatcatgaggaaattggacaaatcaaatgttctcgggctcatcggagaggagtggatcttcctgacagtgagcgaggcatgctactatgcgcagcaaaactgcaagataggagtaggaatgggtgtagtacaatgtgtagtagatcctgaacacatggtctgaaactctgtaatagaatgtgcagtacaccagtatctcctg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0420400, RefSeq:Os10g0420400