Os02g0573000

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Revision as of 02:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0573000| Description = Conserved hypothetical protein| Version = NM_001053734.1 GI:115446838 GeneID:4329737| Length = 10359 bp| Definition...")
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Gene Name

Os02g0573000

Description

Conserved hypothetical protein

Version

NM_001053734.1 GI:115446838 GeneID:4329737

Length

10359 bp

Definition

Oryza sativa Japonica Group Os02g0573000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22817035..22827393

Sequence Coding Region

22817035..22817930,22819454..22819516,22825725..22826431,22827377..22827393

Expression

GEO Profiles:Os02g0573000

Genome Context

<gbrowseImage1> name=NC_008395:22817035..22827393 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22817035..22827393 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgaacagcttgtccttgcgggagaaggtggtgccgcaggagcagcgccactgcgcctcctcgccgcagtggcggaggtggctccggaggtcggcgaggacggcgaagcgcttcttgccgccgcagcgctcgcaggcgtagagcttggggcagtggctccgccggaagtggttgcgcgcgcacacggccgacttgagcggccggaagcggcggtgcgcgcggttccggttgcagccggcgtaggggcacgagaaccgcacctcccggccggcaggcggcttcggctggccgggcctggagagcgcgtccagggtcttgaagcggtcgccgtgggcgcgcatgtgcatccggaggttggcgtcgcggcggaaccccttgccgcagatgtcgcagaagtggacgtgctccgcgagaagctcggaggcgtcgagctcgacgacgtcgtagtcgccgtcgcccttggctgcttcttgcgggggttcctgaggcacggagaccaccacgggggggagctcctggacggtagtagccggaggcggaggtggagccgggagggaggcgacggtggaagagaggagggaggcggcgttgaggacgacgaggtgggcagcggaggagatctcggaggagacggagtggatgtcggaggaagagaggggcccggattctccggatatagatgcggcgatgcggcggcggacggcggccatgcggtcgccgagagcaaccaaccggaggagcgcgtcgcgggcatccccgtctcctcctccggctccggcgccgccggccccgccgacgagggcgccagagggatcccctacttccatggccagcgtcggcgccgtggcagccgttggtggcgcgacggagccgccgccaccgccgccggcgaccgacaacacgcgcacatgtcctggactcggagagaaaaaatcgtgattaacttaacaattacaattccaaacaatgagacactgctagagattgggagggtggtggaggtagagggccaaatcctttcagcaagaagcccaattgggtcatcgtcgacttcgctcgcgactggctcccgcccatcgcaaatgagcaccaggttccatgcgccttcttctccgtcttctccacgaagatgctcgtgttcgtcggcccaaaggcagcacgcacggagaaggagaagggcggtggctgtcggccagcgaggaaaagggcagggagcggcagccattggacggggaggtcggcaagcgtgcatggagagggaggaggcgaggaggtcgacgagcacgcgtggagagggagaaggcggggagaccggcgagcatgcacagagagggagggagcggggaggccctcagcccgttgatccccatgtcccattggcgtcgactccccgcgtcttcgttcgccacaccgtcagtagtccccatcccgacaacagcgacgtcgtcgacgtctgtcctgccggtcaacttcctgttgctgctcgaatcgattcttccgggtgcacctaccatggtgtggccgcaatgccgcgttacgtcgccgtggaaagcaccagagaaaaagtcatggatgcatctctggggaaggtaaggcttgtgcctcaaggaggcggccacgtcaaaattgacaaattccacgtcgcgtcgccgccgccaatgagacgccaatggggatag</cdnaseq>

Protein Sequence

<aaseq>MAEQLVLAGEGGAAGAAPLRLLAAVAEVAPEVGEDGEALLAAAA LAGVELGAVAPPEVVARAHGRLERPEAAVRAVPVAAGVGAREPHLPAGRRLRLAGPGE RVQGLEAVAVGAHVHPEVGVAAEPLAADVAEVDVLREKLGGVELDDVVVAVALGCFLR GFLRHGDHHGGELLDGSSRRRRWSREGGDGGREEGGGVEDDEVGSGGDLGGDGVDVGG REGPGFSGYRCGDAAADGGHAVAESNQPEERVAGIPVSSSGSGAAGPADEGARGIPYF HGQRRRRGSRWWRDGAAATAAGDRQHAHMSWTRREKIVINLTITIPNNETLLEIGRVV EVEGQILSARSPIGSSSTSLATGSRPSQMSTRFHAPSSPSSPRRCSCSSAQRQHARRR RRAVAVGQRGKGQGAAAIGRGGRQACMEREEARRSTSTRGEGEGGETGEHAQRGRERG GPQPVDPHVPLASTPRVFVRHTVSSPHPDNSDVVDVCPAGQLPVAARIDSSGCTYHGV AAMPRYVAVESTREKVMDASLGKVRLVPQGGGHVKIDKFHVASPPPMRRQWG</aaseq>

Gene Sequence

<dnaseqindica>1..896#2420..2482#8691..9397#10343..10359#atggccgaacagcttgtccttgcgggagaaggtggtgccgcaggagcagcgccactgcgcctcctcgccgcagtggcggaggtggctccggaggtcggcgaggacggcgaagcgcttcttgccgccgcagcgctcgcaggcgtagagcttggggcagtggctccgccggaagtggttgcgcgcgcacacggccgacttgagcggccggaagcggcggtgcgcgcggttccggttgcagccggcgtaggggcacgagaaccgcacctcccggccggcaggcggcttcggctggccgggcctggagagcgcgtccagggtcttgaagcggtcgccgtgggcgcgcatgtgcatccggaggttggcgtcgcggcggaaccccttgccgcagatgtcgcagaagtggacgtgctccgcgagaagctcggaggcgtcgagctcgacgacgtcgtagtcgccgtcgcccttggctgcttcttgcgggggttcctgaggcacggagaccaccacgggggggagctcctggacggtagtagccggaggcggaggtggagccgggagggaggcgacggtggaagagaggagggaggcggcgttgaggacgacgaggtgggcagcggaggagatctcggaggagacggagtggatgtcggaggaagagaggggcccggattctccggatatagatgcggcgatgcggcggcggacggcggccatgcggtcgccgagagcaaccaaccggaggagcgcgtcgcgggcatccccgtctcctcctccggctccggcgccgccggccccgccgacgagggcgccagagggatcccctacttccatggccagcgtcggcgccgtggcagccgttggtggcgcgacggagccgccgccaccgccgccggcgagtaggtgggtggtggacttcatttcccaaccttttttttttctaacttcgctttggcatcacgacgcgtttgacggctttgaggtttgtgataccttttgcgcgcaggtccctgcaattggtaaattttgcaagtatttccattgccccctttttttttcttttcttttccaaaggatgacgctacataatgtgaataaataaagtggcttttcagttataccattttgcttttatgttgcacatttgcacatccagttatggctataacttttttccctcatactttttcgaaaaggaaatatcataaagacacatctctccatatactttcatgatatgatattattcgcagcggagttctatctacatgaagaaattagacattgtgccattgtcaaaactaggtttcttctaaatgccactccgcaaaagggatttgataaaatgccattccacaaaatgaatttgataaaatgccacaccacaaaagggaatcgataaaatgccatcctaaacccgtggctacacgctagaatgctatatgggaccaaattaccctctcctttcttgcctgggcatgtaactgttgggtcagtgtgtgacatggtactcatggcagcagcggcggtgaggacaccagcggcaacgaggagcgaagttgttcctcaggatgaacttccctagggtggcagtcaacaacgaggtctccggcggtggaggcaccatcgaggatgatctctctcgctagtacaaccgcctatgcgagagctctgtttccccagttgtcgcgactcctcttcactccaactccggctccttccctgcatggtgttgctccattagctgcctccatggctaccgagagctttgttgccgaccaatcgtcgccttcagcaacctcctcgaggagagcttgagatccaccgccgtgcttcgccttgaaccaccgcctccatagaggcatggatctcccctccccttcttgtcatcgagcagtactgtgagggagagaggtaggccaaccagtagctgagtcttttgcttgtcggcgttggcccttgtgctcgagcttcgccactgcacaggagctccccttgtccgcgctcgcactcgaaggcctcactaccagcccctttgctggtctcagtcagttgcgagcccctactacaacaatttgagaagatgagacgagagcgatgtccaatggccaaccatcaatgacggcgaggggtaatcggagttgaaatagaagatagggatggaggaatccaagggcaatttggtcccatatagcaatctagcgtgaagccacgggttgaggatagcatcttatcgaatcccttttgcggagtggcatttcgttgaaacccaattttggtaatggcacaatgtctaatttctcatctacgtgtctattattccggaaaagctaattcacgcgtgcgcgttggcggcgcacgttttaggcccatgcacagccatacgttatgttttcttgtgacttttcctttttttttttagccgacaacacgcgcacatgtcctggactcggagagaaaaaatcgtgattaacttaacaattacgtaattaattttcaataatcacaatcttaattaatctttcctttttttctgcctaagattgttttctttttcactataagcttaaaaatatagacataaaatttgaaagtatccaattaaatttaaaacttactataaaaaataaaactttcaactcgaaatttgaaaattttaaactcaaattttgaaactttcaactcagtttgtgaagacttttaactcaaaatttgaaaacttttaactcgatttttgaaaactttaagctcgaaatgaaaactttcaactcaaattttgaatactttcaagtcgaatttgaaaactttcaacttacaatttaaacttttaagctatttttttaaaaaaaatcaactcaaatttttaaaactttcaactcatatattcaaaacttttcaatttattctgattataaaaactataattagcacaatcattttacactatcattagcgctaatgatgcacgagtgtactactatctcggctatgctagttggctaacccaacgctagttaatcaaccagcgcatatgcgcgtactagcaacccctattattcgacttctatttgatacacattatatatatatatatatttatttatttcagataaacatacacaaatcatatactattttctaaaattacaagctggtttggaaggtttcacgttctgggccaggatgtaattctgcgtacgacggttggggctttcaggaaagaaagaataaagcgtaaagagcaagggtggaatggcaaaagaggtaggcagatcggataggagttttgggggcgcggtccgcggtgcggtgcccagcggtggagtgcgcaagcggggccgtcgtgatcaaagtcaaagttgtgagctcctctcctctcgtcgtcgctcgcacgcacgcacgcacgcacgcacgcgacgccacgccaccacccgcctttccccacccaccaactcctctcgctgacactcctttccccaccggccaccgcgacacgacacggcacggcacgggctcacgcgtcagcgtcagcctcagcggggcgacggctcacgaggcaggcagcggcggtgcgtgcgtcgcgaggggatgggttgtgggtgtgtgcgtacaagtgtggggcattctcaattcgtcgtgcgcgggcggtcaagtgggcggctttgcgaagcagtcgcacagcaaacaggagtatggtgaggtgaggactgatgaggagcaaaagttccgttggattgcggttggggccaccctcttctcctccaatgggaataattcgatagaaaatgtaggcgaggtcgacgtccgtcagcccgtggatggtgattaggaggcaaccaggactagagaacagtttaatcatgtgtaaagtgaattatctaaaaaaatgtgttaagtgaatgcccaacaacatactgtagtactactagtagcgaccgtcgtgagaggaatcatcaagctggtactgctgcaatcgtatcgtagtgggaagaataacaagtgtactatgggcctctttagactccctggtaagttctttcatcttgccatatcctgccatatcgaatgtttggatatatgtatggagtattaaatatagacaaaaaaaactaattacacggattgggtgtaaattgcgagacgaatcttttaagccctaattgctccatgatttaataatgtggtgctatagtaaacatttgctaataacggattaattaggtttaataaattcgtctcgcagtttacgagcggattctgtaatttgttttgttattagactacatttaatatttcaaatgtgtgtccgtatatccgatgtgacatcgcaaaaattttcacccctggatctaaacacatcctatactattgggtatgcttattgctcggatcatttgttattgaaaacagacaaaaagacatattaacatgatagaaaatgtatgcataaaatggtggattgaaaaatatagaaaaaatatatgagatagcttgtgtggatataggaattcaattttgaggctgttattatacagaattccgttcggacaggatgacagtaagtaggttgatatttaccgataccagatgcggtacccctatcagtaccagtttgatactcatcgatattaggccgaaaaccatcggtaccaagcctccttgcctacgccgaaggcccgcgtagcatcggtatacgagacatcgtggtcgcattgcagagaatctagcccatcgggttagtggagtcgagcagcggggactcggatggtcaaacctcatagtgtccaatcttcattatttgccgaagaggtttagcctctaggtggaagtagtggcttgtatacgccatcaggcggatcagccgctgcaacgagggtgtcgtacgagatagatgccgcagaggtccgacctaaggaggtggttgacatggatacattttgatcgctagtgtagtttggtgctgacaagaactagtctcgactagagctgccatgggggctcttcactggatggcaaggtcagggggtggcagcgatggtcggagtgagagaaagggaatggtggcaaaagtgacgccgcaaggagaggaggccaagctaacagggggagcataccacatggaatacggggtgggatctagtcccctagcatttctgaaagacagtttccaagaaaatataaaagataatcggtgttgcatgagtatcatgtagattcgcgtagtttggatgctcccgacaaaaatctcaaattgtctcaactcaatttaataaaaaaataaagctaaaataggtcgctctcttctaggggtggatatcgagctagcttagctcagctctgctcgacctagctcgttaggataacaagctggttcagctcagcttattatccaaacgagctaaaaggcaggctttggcttggctcgtgtaccagctcgagctagctcgtttagcttgcgagctagagccagaattaaaaaaagagcagatgcaatatgtcagcccctagccttaatgttgaataaattaagattggaaagaaaatcaagaaatcctcaaacgtttggtatgattaatacatcaagcatgctaatgatcaattattacaaaccatgtgaaaccgagtggccagaatgctggattaaaccagtattacaaaaatccaagaaacattccagatctaaaaaaggaaaatgagggttgacaaaacatgtgagaaataatcatcttgaaagaaaggatggacatatggcatggttgatctcattcacccgcttgcttcttcggtgattcggtcgatgaatcgagcaagaggaccacatggctaggggcatggtggcgccggccagacctcataggagcggctaactccatggcaacagaccttgttatccaccccaccacacctactcagatgcccggacaggaagaagagggatggtaggaggtggatgccggtagcgcggggtgggagccagcaaccggcggagacctagggtcttgggacggcgtgttgctgctaacagcaagagagaaaacaagaggggagggagtgaaagtgcatctaacctcataagtgagttttggtgattaatgacaaaacaagtaagggactaatatgtttattgagataaatacagataattagtcccagggtgcttaggtgtgctgggaaatcccccaacaacaaatacaaagcggcaagaggactcggagatttatttaaatttctttttatattttgatcctcaacggagagtaggatccctatgatccaaacttcaggataaaatatttgtctccctcttgttttaatctcccttgcttgtgtggtgttctccttgtgattattgattattgtcttctgctgctactctatggtcctgcatattactctaacttctaagtatcattatattaccttttgcttagtgtgatatgctggtcagaggctaagtcttaccttcccggaagttccgggcagcattttttgcttagcggaaaagctgtcaggaagttccgagtccgagccattttgccaagaagttatggtcctgttgaatttaattgttgcgattcaagaaactttcacaaacacctattcaacccccaaccctatagacgacatctacaagcttttagagaggagccgtagtagatcgaggttcgagactagggaacgggcgaacagccggacaagagatcgaactccatccagggtagataggataagcattttgcttgcttttttcttatcgggcttcgcacatggaccgctcggttgctaacgttgggctcgcaagctagcttgagctagctcgttataagtaacaagctaaaacatcatcttagctcattacaaaaatataacgatttgagccaagcaagctaataagctatgagcttttcgtccagccctattctcttctcacgaggaggatcataccatcccgcatacccgctgcagcaatgatgttagctttccgattcaataaaccacggaatcttacagaagaataaagagtagaattccttatttatttgttctcaaattatgctctcgtggattttcctgtcttcatttgggttgtcttggactttggtaaaagctcttattgattgagcttcatcttataagctgtacaaatatgagggagaatttactatttgccactctctcaaaatgccagtgcccaaatgctactctcccaaaatttcattcccaaatgccacccgggcccacatgtcagcctcactcatcattgggtcccgcatcacttttgtttgaatggagagtgaggctgacatgtgggcccgggtggcatttgggaatgaaattttgggagagtggcatttgggcactggcattttgagagagtggcaaatagtaaattctcccacaaatatgaacaagaaataatcaggattgacagaatacttgcaataattttttttaagggaagtttcgatttttcagcatctaaccccacaaccctaccattggaccagctagcagttttgaccacatgactacagtttgtgtcctagttacataaacaatatatatagttataatacaattataatgtattacactataattacactgtatatacatttgaactgtttttcattaaatatctgttggaagctgtataacttaccggtaaaacttttatatttatatgacgtgtgatttgaaagccaaggctagattattctatttttgctagaacaaaagaaatcctggaaagttcggttcccaaccatttgatttcttcctcttttgaaccaactattcttttttttagaacattgaaccaactattcggataattttattcaattacggtgggaactgtagtggtcctctttgggctctctttgcgcgcaaatataggccgtaacgtggttgatcgaatttgatggttcatagggtctctttaggtctcctgtaaattttttcaccatgtcacatagaatatatttgaacacatacataaagtaataaatataaataaaaaaagattgtgtataaatcacgagacgaatcttttaagcctgattgatccatgatttaacaatgtggtgctacagtaaacatttactaatgacagattaattaggcttaataaatttgtctcgcagtttactggcagaatctgtaatttgttttgttattagtctacatttaatactttaaatgtatatacatgtattcgaggtgacatgccaaacttttataaccaacgatctaaaacgcccccatactagtacatactcctagctgccggatacgagatcaactgggcgtccacatgtgaaggtgcagccgccgatgtccaccggccaatcggccatctcgagatcccaactggcgctgctgctgcgtgaacctctctcatgatgttgccgctatgggttatcacgatccactcattaggcggcccaactaatttcttccagcaagcgcgttcgtgacaatccccgttgtggcccatgtcactgtctcgcggactggagtactggacgtcacgtcacgtcccggcctaaattactggtttgggccgacacgtcttctgttcattcagggattcggcggtagccaacatagattaagttcgctcttgagatcccttaacttatcaactaatacgatattcatccttcaaccgatattcgtccttcaaccagaattccaaacaatgagacactgctagagattgggagggtggtggaggtagagggccaaatcctttcagcaagaagcccaattgggtcatcgtcgacttcgctcgcgactggctcccgcccatcgcaaatgagcaccaggttccatgcgccttcttctccgtcttctccacgaagatgctcgtgttcgtcggcccaaaggcagcacgcacggagaaggagaagggcggtggctgtcggccagcgaggaaaagggcagggagcggcagccattggacggggaggtcggcaagcgtgcatggagagggaggaggcgaggaggtcgacgagcacgcgtggagagggagaaggcggggagaccggcgagcatgcacagagagggagggagcggggaggccctcagcccgttgatccccatgtcccattggcgtcgactccccgcgtcttcgttcgccacaccgtcagtagtccccatcccgacaacagcgacgtcgtcgacgtctgtcctgccggtcaacttcctgttgctgctcgaatcgattcttccgggtgcacctaccatggtgtggccgcaatgccgcgttacgtcgccgtggaaagcaccagagaaaaagtcatggatgcatctctggggaaggtaaggcttgtgcctcaaggaggcggccacgtcaaaattgacaaattccacgtcgcgtcgccgccgccaatgagtacgtctcactaaagagcagctcagtaacatcccccccccagcacgctcgcgttggtaaggtgggaacggaggtccctagacctccccagtggtcgagctcggtgacgtcgccgccgttgcctagctcccgccgaacaccggccgccacccagctgtagacctagacagagatggggaatagggggagagggtgagagaggaggaagatgacgttgtatcactgacatgtgggccccacatgggtcccacctttatttaattattttttgttttacctgacatgtgggcctcataatttttatttttttatcaaactgtcacgcaaacgccatgtcaccaccacgtaggacgaaaaccttgttaaatcagccatgtaggtgccacgtaaatcaaaatcacttagggacctcgtctgtattggttttgatagtttagtgatccgttgtatctggtaatggtattgcggtacaaggacgaaaatctaccacggtgtaaagttaaatgacctgaaatgaacttatgcgtagccaacatttatgcaatggaatcgtgttggtgattctctggagcccactgccgggcacggagcagtggcacgcggcgaccggatggatattttgccggttggtgcggccgcgaggacttcgctcattcgctggtggaggcgcgtggagttggccagcggggtgggtgcaaatcaccaaacaagtccgaacgcgcgagtttggagttgctgatcatgctgcgcgccatggccatgcaggagcacccggcggcggccgcatcggaatttttcacccactcgatccaccgccgcctgacgcttgtatgctcttccccgacaagaagaccagaattcgtttggatcaattcaaccaatccctcttatcaatttagtttcacctcatccggttgatctgatcgatcacgtcgtttaactcaggacgccaatggggatag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0573000, RefSeq:Os02g0573000