Os02g0573500

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Revision as of 02:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0573500| Description = Similar to Monosaccharide transporter 1| Version = NM_001053738.1 GI:115446846 GeneID:4329741| Length = 6990 bp| De...")
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Gene Name

Os02g0573500

Description

Similar to Monosaccharide transporter 1

Version

NM_001053738.1 GI:115446846 GeneID:4329741

Length

6990 bp

Definition

Oryza sativa Japonica Group Os02g0573500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22853391..22860380

Sequence Coding Region

22853459..22853615,22858580..22858899,22858988..22860094

Expression

GEO Profiles:Os02g0573500

Genome Context

<gbrowseImage1> name=NC_008395:22853391..22860380 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22853391..22860380 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccagagggggagcgatggtcgcggcggcggatgccggcgccggcgccggcgtggcgcccgggtacagcagcgagatcacgttcaccgtggtgatgagctgcctcatggcggcctccggcgggctcattttcggctacgacatcagcatcacaggtggactgacgcagatgcagtcgttcctcgaggcgttcttcccagacatctgggcgaagatgaacaacgccgagcaggacgcgtactgcatcttcgacagccaggtgctcaccaccttcgtctcctcgctctacctcgccggcgttttcgcctgcctcatcgccggccacgtcacccggagggtgggccggaggaactccatgctcatcggcgcctctctcttcttcgtcggcgccatcctcaactgcgccgccgtcaacatcgccatgctcgtcatcggccgcatcctcctcggcttcgccgtcggcttcaccaaccagtctgcgccggtgtacctggcggagatagctccggcgcggtggcgcggggcgttcacgagcatcttccacttcttcctcaacgtggggatgttcgtggccgacctggtgaactaccgcgccaacaccatcccggtctggggctggcggctgtcgctcggcgtcgccgtcgtcccggccgccgtcatcctggtgggcgccgcgttcatcccggacacgcccaacagcctcgtcctgcgcgggaagctcgacgaggcccgcgcctcgctgcgccgcatccgcggagccgccgccaacatcgacgccgagctcaaggacatcgcccgcgccgcggaggaggaccggcagcaccacaccggcgcgttccggcgcatcgtgcggcgggagtaccgcccgcacctggtgatggcgatcgccatcccggtgttcttcgagctgacggggatgatcgtggtgacgctgttcacgccgctgctgttctacacggtggggttctcgagccagaaggccatcctggggtccatcatcaccgacgtggtgagcctggcgtccatcgcggcggcggcgctgaccgtggacaggtacgggcggcggacgctgttcatggtgggcggcggcgtgctgctggtgtgcctgacgggcatggcgtggacgtacggggcgcggctggggagcgacggcgggaaggcgatgccgcgcgggtacgcggtggcggtggtggcgctggtgtgcctgtacgacgccgggttcggcatctcgtgggggcccctcaagtggatcatccccagcgagatcttcccgctggaggtgaggtcggcggggcagagcatgagcgaggccatctcgctggcgctcaccttcgcgcagacacagtcgttcctccggatgctgtgcagcttcaagttcggcgccttcgcgtacaacgccgcgtgggtggtggtcatgacggcgttcgtggcgctcctcctgccggagaccaagggggtgcccatcgagtcgctcggcgcggtgtgggcgcagcactggtactggaagcgcttcgtcaagccgccgccgccgccgccatcgacggcggcggagaccaagcaggcggacggggctccggcatga</cdnaseq>

Protein Sequence

<aaseq>MARGGAMVAAADAGAGAGVAPGYSSEITFTVVMSCLMAASGGLI FGYDISITGGLTQMQSFLEAFFPDIWAKMNNAEQDAYCIFDSQVLTTFVSSLYLAGVF ACLIAGHVTRRVGRRNSMLIGASLFFVGAILNCAAVNIAMLVIGRILLGFAVGFTNQS APVYLAEIAPARWRGAFTSIFHFFLNVGMFVADLVNYRANTIPVWGWRLSLGVAVVPA AVILVGAAFIPDTPNSLVLRGKLDEARASLRRIRGAAANIDAELKDIARAAEEDRQHH TGAFRRIVRREYRPHLVMAIAIPVFFELTGMIVVTLFTPLLFYTVGFSSQKAILGSII TDVVSLASIAAAALTVDRYGRRTLFMVGGGVLLVCLTGMAWTYGARLGSDGGKAMPRG YAVAVVALVCLYDAGFGISWGPLKWIIPSEIFPLEVRSAGQSMSEAISLALTFAQTQS FLRMLCSFKFGAFAYNAAWVVVMTAFVALLLPETKGVPIESLGAVWAQHWYWKRFVKP PPPPPSTAAETKQADGAPA</aaseq>

Gene Sequence

<dnaseqindica>69..225#5190..5509#5598..6704#gcgttgagctgtgcgggctattttttttttctctctgatttgctgaattgctgctgcgggcggtggagatggccagagggggagcgatggtcgcggcggcggatgccggcgccggcgccggcgtggcgcccgggtacagcagcgagatcacgttcaccgtggtgatgagctgcctcatggcggcctccggcgggctcattttcggctacgacatcagcatcacaggtcagtcagccactcgctcagttctgctgcatatatgccatgaatttctggcacgattatatatcggacacaatccattcttgcgtccgatgatcatacaaatcggacgcaaattatatatgccatgaatttctggcacgatttggaccgagtttctctagctcttcgcctctttcataatagaaaaaacagagtttggctcaagatttgtgagctgttctcctatgcttaaagatgccatccttgtagacatctaccagaacagaccaacgcccaaatgatccaccgaaaagggagtaaattgaaggcattaatcctatcgagatagtaagacaactcatagattgtatgatgcagaggcggaataaagtgcaattttactctctctgttttttctattactgaaagaagctttgtcagcttcattttccagttcttccgacagatccagtcgatatcctacttgactcttccaaagttaaaagtttgagttgaaattgatacgatgtgactgaaaaattatgtgtgtatgacagatcgatgtgatggaaaaagttaaaagtttgtatccaaacacagccctacttagattagtcgatcgagtcaggtgtcacgtttgatcggcgtggagattctctgtcttgtctcctcgtcaattggacctttctacttgatgggggcaattggcaaggctagcttgtcaagttgccatttccttcagatagaacagtcataccgctagtactacactactacctcagaatatcgttacactatcccaggtgaaaaaaatcccaggacatttttttactgttacagatatgtactactacgagtacgctgtacttgcttaggtaatgaatgttattaatgattaatcatgcagcgtgtaatgaaaaaggacgcatacgtacccaaagaccaaggtgcatacttatcatttcgcttatgctgttcagtctcatcgtttcatttatacttattgttttttagaaaaagaaatgttcttttaacaaagaaacaaacatgaagtccagagatatgatttacgacagtgaaagcagaggaaatttgtttacgcctgatctttcccacaagaaaataaaatacttacattttgaaaatcaatagttagtcaacgctacagtatgcatggatcgcggaaagagacaagacgcgatgtagaatatgcgagtgtcatgatctcgagctacgcaaaacatgctcatttctcaggggtcacaatctctcattgcggccctctcacgctgctgatacggcaacccccagcaatctcccctgctgatgcaactacggttatgaaagacacaaatcacacgtagttcatgatgatttgcagatgagacacaatatgctacgactagctgtttttttcatacatctatctatctatctatctattatatactaaaagtccattaaacttcctacaaacgctcctaatccgccacgtggcactcctacaaacgctcatatgctgccatgtggcgctctaacaaaataaaaaaattgttagaaattctaaaaaaagatttagttagatctatcttcgaaaaaagtagtccgaaaccttcctctctgttcggtgtgcgcacgcatgttagccatccctccctcccttctgttgattttttctctctcctatggtagttaagttagttaaggtaaaagacatccaatgtttttatggccatgcatgcatattaatttattggtttcggtagttctataaatagataaacaatcttttaaatagttgtaacttttaaattatatttcaatttatgacctatttgtaccattgtattttttaattaaatcaataattaagatccaaatagactatgatgtaacgctacaaaattattactgctgaactcacattcatcttgaggcctctaagaaaataaaatcaaaatatgccaccctaattttttactcatacactgttagatatctaacaactttgtgtagacttaagtaacttctgtcaacatctacatgaattggtcgataaataagatgatcgatcatagcatctaacttatagatatagatatgatctaataaattaagaaattcgaccatcaaatttcattaaatcagtggacccattgttttagcctgttagatctattttatcaaaacaaaaagaacacattcagatcaatttttatctaagtcggtggacccattaattgctttatatcattagatctctgtaaaataaccacatccggaacctccacgtccagtgcgaacatacgtacgtaaatcaaaattatctttacaggttaaaagaacacacaatagacctccacgtactaggtctagcggctctcaaactgtcacttagaatatcctacggtgctattaaattagagaaaatactattaaattagggaaaataatagaaaaacagacaaagaaaagaaagcatctgaatataggtttctatttaaattaatgggtacattgtttctggttgcagaattttttcataaaaaacatctcaaacctctctcctccctaccctccctgtgcagtgttaatgcccattaacatcgcataaacgcttctaagccattaaacgacattcttaaattagagaaaatcataggaattttgaaaaaaagacacatctaaccattggttttgacttaaatcgttggacacattattttgaatcgattgacacactatttttggtcattggatctatttttataaaagaaacaccccaaacatccttccctccctcccgctcctttgcggcatgcggtgctaaaagtccattatacatcttataaacactctttaagctgttacattgctcttttaagtgagacagtatcctccaaattctgacaagaaaagaaaacttccaaccatcgatttcgacttaaacatatgacaaatcatttaggtcgttagattaatcatttagaaaaacatgccaaaccttcctccctccctgcccgtgtgtggcatgcaccattcctttactctctgtttttttatctccctgacaattaaaattgaaattatctatatgtcaaagaaaaaccacaaatggatctccacctattacttatatcctgttagacatctaacgactttctaccaacttaattaatttctcttaacattgtccatgtttttctttttggtaaaacttgctatagtacattgtaaattcttgacatttaacgtagaacaatctagaaatttctatttgttataagagacttcagtttagtgagaattcactaaaaatactatgaatctatgatcattacttcaatacacgagagaaaatttaaacatatgcctttaccctgtgcaaggttatatgcacttctattttcatcccaatttgcaagatcaaagcttgatgattcataaaacataaatctaaaaaaaaaatggacatgaaataaattgaaaaaatgttgttggatttaaaactcattctaaatagaaaatttcaaacattttaggaggattgttagaatgaaaatagatataaaaattaactacagtaataaatgacattattggactattttggagggtgtgggcgggagggggtgcaagatatctttcagggcagtcaaaatatataaaaaaatttctcatgggaaccacatacattgtttcgacacaactgcacgatctcaagtaattttattttagaatttatatgtagcgatggtgccaacgttcaaagcaaaataagtaaatttaatttagtttagaatataataaaagcattattattaaaagtcacccatacataaatattcataagaaaatttcaccacattaagtaaggtgcccgcgcatgtgcgcgggctaccttcctagtttttctaaaactagattaagtgaaaaatatatatatttggcaccttctttttttcatctatacacagctatattgttcagttcacgtcattataacctaaacttgtcacaattaaaattatttatattttttctccatattttttaggtctctagactgaaattgatgggtatttttgccatccctttatcataaataataatgtgatgaaccaatagttctataatattttgtggttgtttatgaactatgcatgcaaatgctttgttttctaccaggggggcctaggtttggcccaagacctaggccggcccattgtactttgtgctgaggaagtatcttatcttacatgatggaaaaaatacaggtcatagtgggactgaaattccaaaggccttagatccgcctctggttccactctattgtggaatttgtagttatgtaaactgtcatagcttgtttgaaaaataaacaaattagggctaaagacattatctatcaaaattgtttttaaacataattgttttcactaacaacttgcactaaaagaaaataaaaaattagactttgcatccaaccagattagaataattgatctgtctcacatagggtctaggtagtgtggttgtgtacttgttggtgcatgactttatccttacggtttaaatcttgctacctacaaatattacacaatatgggtgtgctctccgtctctttgagtatgtgttagagggtttctaatatgcgtaaaaacacattagatgagtttcgagcgatttcatttatgcactataaactttccctcatgccaccaactcgtgccaaaaaaaaaatcgtaaccaatgatgtcaaaacattccacccaaaagatctctgatccattccgtgcatgatggtatttattagagcgattcacacgaggatgtgattatgttattggtggttatgcttttttatttttgaatggatgggtacattattgtaaacttttaaatgggggtatggattttttttcccttagtcatatgatgattaagcgatttaattttgtttgcaatatatcgaaaaatttcaggtggactgacgcagatgcagtcgttcctcgaggcgttcttcccagacatctgggcgaagatgaacaacgccgagcaggacgcgtactgcatcttcgacagccaggtgctcaccaccttcgtctcctcgctctacctcgccggcgttttcgcctgcctcatcgccggccacgtcacccggagggtgggccggaggaactccatgctcatcggcgcctctctcttcttcgtcggcgccatcctcaactgcgccgccgtcaacatcgccatgctcgtcatcggccgcatcctcctcggcttcgccgtcggcttcaccaaccaggtgcgaacgcgaaccaggcgccattgccaatgatgggagagtaagtcttgcgttctaatggcggtttctctgtgtacatatgttgcagtctgcgccggtgtacctggcggagatagctccggcgcggtggcgcggggcgttcacgagcatcttccacttcttcctcaacgtggggatgttcgtggccgacctggtgaactaccgcgccaacaccatcccggtctggggctggcggctgtcgctcggcgtcgccgtcgtcccggccgccgtcatcctggtgggcgccgcgttcatcccggacacgcccaacagcctcgtcctgcgcgggaagctcgacgaggcccgcgcctcgctgcgccgcatccgcggagccgccgccaacatcgacgccgagctcaaggacatcgcccgcgccgcggaggaggaccggcagcaccacaccggcgcgttccggcgcatcgtgcggcgggagtaccgcccgcacctggtgatggcgatcgccatcccggtgttcttcgagctgacggggatgatcgtggtgacgctgttcacgccgctgctgttctacacggtggggttctcgagccagaaggccatcctggggtccatcatcaccgacgtggtgagcctggcgtccatcgcggcggcggcgctgaccgtggacaggtacgggcggcggacgctgttcatggtgggcggcggcgtgctgctggtgtgcctgacgggcatggcgtggacgtacggggcgcggctggggagcgacggcgggaaggcgatgccgcgcgggtacgcggtggcggtggtggcgctggtgtgcctgtacgacgccgggttcggcatctcgtgggggcccctcaagtggatcatccccagcgagatcttcccgctggaggtgaggtcggcggggcagagcatgagcgaggccatctcgctggcgctcaccttcgcgcagacacagtcgttcctccggatgctgtgcagcttcaagttcggcgccttcgcgtacaacgccgcgtgggtggtggtcatgacggcgttcgtggcgctcctcctgccggagaccaagggggtgcccatcgagtcgctcggcgcggtgtgggcgcagcactggtactggaagcgcttcgtcaagccgccgccgccgccgccatcgacggcggcggagaccaagcaggcggacggggctccggcatgagagacgtggtggtggggggctgggcattgacacgtacgtacgttgtgttagctaatgctgatgggctcgtgatgtcgggcactgcatgcatggtgcggtggtgtggagtgtggactcgatatccatcggcatcgccgttgttggggttagccacacgggcaactgggcaaaccggggcgatggacatggatgatcgaacaagtcgactagttctgtcttgtgtaacgcagacacggtagagtctgaccatcaaacgttacttatcacatatacagtactccgcagt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0573500, RefSeq:Os02g0573500