Os02g0577300

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Revision as of 02:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0577300| Description = Galectin, galactose-binding lectin family protein| Version = NM_001053755.2 GI:297599461 GeneID:4329760| Length = 43...")
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Gene Name

Os02g0577300

Description

Galectin, galactose-binding lectin family protein

Version

NM_001053755.2 GI:297599461 GeneID:4329760

Length

4387 bp

Definition

Oryza sativa Japonica Group Os02g0577300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23032176..23036562

Sequence Coding Region

23032176..23032188,23032785..23032858,23033856..23034600,23034671..23034885,23034973..23035254
,23035338..23035466,23035556..23035735,23036006..23036113,23036356..23036562

Expression

GEO Profiles:Os02g0577300

Genome Context

<gbrowseImage1> name=NC_008395:23032176..23036562 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23032176..23036562 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcacgccgccgatacagcaatcatgctagtgtttgtgttccgtttattagcttttactctcaccatcttgttatcgccgttgatgtgggtgacaaagcgactcggaattacggttctaatcgtcctcttccctctgctgattgtgcatcatctgatagtgaatagcccagtgtcagggccatctcgataccaagtcatacattctaatctccttggttggttgagcgactcattgggaaattcagtggctcaaaatccagataatacaccagtagaagtgataccagcagatgcttcagcttcaaacagctcggattccggaaattcctctcttgaaggatttcagtggttaaatacatggaatcacatgaagcagttgaccaacatctccgatggccttcctcacgcaaatgaggctatagacaatgcaagaactgcatgggaaaacctgacgatatcagttcacaattcaacctctaaacagattaagaaagagaggcagtgtccatattctatccacagaatgaatgcctccaagccagacactggagattttaccatcgatataccttgtgggctgattgtaggttcttcagtaactattataggcactccaggtagcctctccggtaacttcaggattgatcttgttgggacagaattgccagggggatctgggaaacccatcgtactgcactatgatgttcgtctaacaagtgatgaacttactggaggtccagtcatagtgcagaatgccttcactgcaagtaatggctggggttatgaggatagatgtccctgcagtaactgtaataatgcaactcaagtggatgatttggagcgatgtaattccatggtgggtagagaagagaagagagctataaactcaaaacagcacctgaatgccaagaaagatgaacacccaagcacatattttccatttaagcagggacaccttgctatctcaactcttcggatagggctagaagggattcacatgacagttgatggaaaacatgttacctcatttccatataaagcgggcttggaagcatggttcgttactgaagtaggagtatctggtgatttcaagctagtaagtgcaattgcaagtggcctgcccacatcagaagacctggagaacagcttcgatcttgcaatgttgaagtcgtcacctattccagagggaaaagatgtggaccttttgattggtatcttttcaacagcaaacaacttcaaacgaaggatggcgatccgacggacatggatgcaatatgatgcggtgcgcgaaggagcagtagtggtccgttttttcgttggcctgcatacaaacctcattgtaaacaaggaactctggaatgaagcacgcacatatggcgacattcaagtgctgccctttgttgattactacagtctgataacatggaagacactggcaatatgcatctacgggactggtgctgtatcagcgaaatatctgatgaaaacagacgatgatgcttttgtccgtgtggacgagatacactcctcagtaaaacaactgaatgtcagtcacggcctactttatggtcgtatcaattctgactcaggtcctcacagaaatcctgagagcaaatggtacataagcccagaggaatggcctgaagagaaatacccaccatgggcacacggaccaggatatgtggtatcacaagacattgcaaaggaaatcaacagttggtatgaaacaagtcatttgaagatgttcaaactagaagatgtagcaatgggtatatggattgctgaaatgaagaagggtgggttacctgtccaatacaaaacagatgaaagaattaacagtgatggctgcaatgatgggtgcatcgttgctcactaccaagaaccaaggcacatgctatgcatgtgggagaaactcctaaggacaaatcaagcaacgtgctgcaactaa</cdnaseq>

Protein Sequence

<aaseq>MAHAADTAIMLVFVFRLLAFTLTILLSPLMWVTKRLGITVLIVL FPLLIVHHLIVNSPVSGPSRYQVIHSNLLGWLSDSLGNSVAQNPDNTPVEVIPADASA SNSSDSGNSSLEGFQWLNTWNHMKQLTNISDGLPHANEAIDNARTAWENLTISVHNST SKQIKKERQCPYSIHRMNASKPDTGDFTIDIPCGLIVGSSVTIIGTPGSLSGNFRIDL VGTELPGGSGKPIVLHYDVRLTSDELTGGPVIVQNAFTASNGWGYEDRCPCSNCNNAT QVDDLERCNSMVGREEKRAINSKQHLNAKKDEHPSTYFPFKQGHLAISTLRIGLEGIH MTVDGKHVTSFPYKAGLEAWFVTEVGVSGDFKLVSAIASGLPTSEDLENSFDLAMLKS SPIPEGKDVDLLIGIFSTANNFKRRMAIRRTWMQYDAVREGAVVVRFFVGLHTNLIVN KELWNEARTYGDIQVLPFVDYYSLITWKTLAICIYGTGAVSAKYLMKTDDDAFVRVDE IHSSVKQLNVSHGLLYGRINSDSGPHRNPESKWYISPEEWPEEKYPPWAHGPGYVVSQ DIAKEINSWYETSHLKMFKLEDVAMGIWIAEMKKGGLPVQYKTDERINSDGCNDGCIV AHYQEPRHMLCMWEKLLRTNQATCCN</aaseq>

Gene Sequence

<dnaseqindica>1..13#610..683#1681..2425#2496..2710#2798..3079#3163..3291#3381..3560#3831..3938#4181..4387#atggcgcacgccggtacgtgcgcgcgtcaattaaaccaaagcttgttagttctacttccactagcttattagtcgtgtgctcgcagccgcaggggagaggcaggttccaaggccggctggctccctccctgattcggttcgattcgataaacggggagaagatatcattttggatggagtgtgtacaatgtgtctgtgtccctctctttaaaaaaaaaacgaattgagaaacgatcgaggaccaggccaacaacgtgcgccggttgccgcccttgcaatcgtcttctatatacttttgccctctcgttttttctcgcccgcggtaacggcactactccacgcccggagcccggaggcaaggcatacgctgaacctgaactcgtcgtattctctctcctcccttctcctggatgatcgccgtatctccctaggtaattaagcatatatgcatctctgtgtctgttcgtgaggcgatttgatttaatatccgttttttcctctcttctttttttggactacttcgttaatttccatctccatgaacttgattcaagcatctcttcgtggtttgttgttgatttcagatagctttaatccatatatatatagccgatacagcaatcatgctagtgtttgtgttccgtttattagcttttactctcaccatcttgttatcgccgttggtaagagtggtatagttctggcgataaatcttaggacccttccatttcttttttttttgaagaaaattgggtagtaactctaccgatcaattaaggagaaagcatggggttttgcatgttgcaactaaggtgtttagtcagataaactcataaaactcaagggaagagaagagaaggaaacatgcatgccgctagagggctatggatgcacactcctctgctcaaagcccaatgttctctttggctttacaggccatttctgagttccgacaccattgtggtgatatgttagaaaattcttcgatttctctacttccagaaattcaatagaatataagcgaacattcatggttttctcttccaattttgttacgagtatccatttcttggttgaaaatttgctaagcaagccagaatgccacaacgttcaaagactgcgtgaggcatgtgcaggacttgacttcggctgagggtgcctggtccgctacggtgcatggtatgcttgccaattccggctgcattttcgtatcacctggttgtactccaggtagtggttgtagtacagatacgaaaattgggcacaaggccgtcggatttgacagtcattttcgtgcacagaaagagcggtagcagctaccctttccagtcaaccaaaactgctcccagtctatgtgctcttcttgtgagatctcagtttcttgaatgatcatttcctttgttgctgctggtcttaacatgtgatgacatgtcatcaactttagcatatttatcaaaaggaaaaaagtccacatacctccctgaactttgactgaaagtccatcaaaatatgtctgattggaaatgcacaaattgtagtactcctaagaagcagtaacatcaattgcattggcaggtgaaatgctggaccttgaccagaagcttggattgaagactcaggggctgcattttcattgaactcaggtgattgccacgataactgatggaaacggcactgcagatgtgggtgacaaagcgactcggaattacggttctaatcgtcctcttccctctgctgattgtgcatcatctgatagtgaatagcccagtgtcagggccatctcgataccaagtcatacattctaatctccttggttggttgagcgactcattgggaaattcagtggctcaaaatccagataatacaccagtagaagtgataccagcagatgcttcagcttcaaacagctcggattccggaaattcctctcttgaaggatttcagtggttaaatacatggaatcacatgaagcagttgaccaacatctccgatggccttcctcacgcaaatgaggctatagacaatgcaagaactgcatgggaaaacctgacgatatcagttcacaattcaacctctaaacagattaagaaagagaggcagtgtccatattctatccacagaatgaatgcctccaagccagacactggagattttaccatcgatataccttgtgggctgattgtaggttcttcagtaactattataggcactccaggtagcctctccggtaacttcaggattgatcttgttgggacagaattgccagggggatctgggaaacccatcgtactgcactatgatgttcgtctaacaagtgatgaacttactggaggtccagtcatagtgcagaatgccttcactgcaagtaatggctggggttatgaggatagatgtccctgcagtaactgtaataatgcaactcaaggtacttccaaattgcgtctttattgtttcttctttgccccgttacactagtcatctaacatatatcacagtggatgatttggagcgatgtaattccatggtgggtagagaagagaagagagctataaactcaaaacagcacctgaatgccaagaaagatgaacacccaagcacatattttccatttaagcagggacaccttgctatctcaactcttcggatagggctagaagggattcacatgacagttgatggaaaacatgttacctcatttccatataaagcggtaaccttctatctggaccatgataagtccgacatttactcaactcaattatttgactccttaccatatagatgcttctgtttgtagggcttggaagcatggttcgttactgaagtaggagtatctggtgatttcaagctagtaagtgcaattgcaagtggcctgcccacatcagaagacctggagaacagcttcgatcttgcaatgttgaagtcgtcacctattccagagggaaaagatgtggaccttttgattggtatcttttcaacagcaaacaacttcaaacgaaggatggcgatccgacggacatggatgcaatatgatgcggtgcgcgaaggagcagtagtggtccgttttttcgttggcctggtaataaaaacaaaacaagaatatgatataatagctccgtactatattctgacagtaaatgtattttttatttgttttaaaagcatacaaacctcattgtaaacaaggaactctggaatgaagcacgcacatatggcgacattcaagtgctgccctttgttgattactacagtctgataacatggaagacactggcaatatgcatctacggggtaaagtttcatgttctacctctaattcattcccttccatttcttgtttgtctttgcttagcacttagcagtggttttcccctgaacagactggtgctgtatcagcgaaatatctgatgaaaacagacgatgatgcttttgtccgtgtggacgagatacactcctcagtaaaacaactgaatgtcagtcacggcctactttatggtcgtatcaattctgactcaggtcctcacagaaatcctgagagcaaatggtacataagcccagaggtaatgtctgcacaacaatcagttctgtgcaatcaaattcacaaatctctacctgaaaaacatcaatattgtaaacattttcaatctgaactcatcgttgaaatccaatattccaaatacacaagctacaatatgtccgaggatgtttatactaaataaccaaatcaatttgcaaccagtcaccatactaagacaaaggggatcatagatgatatttttggatggtcaagaaacacaagtgctaactatgaattgtgatttgctctgcaggaatggcctgaagagaaatacccaccatgggcacacggaccaggatatgtggtatcacaagacattgcaaaggaaatcaacagttggtatgaaacaagtcatttgaaggtatttgtatttagatgtagacacaaacagtggctctgcacttacatgctaaatttaacttgaaaatttgctacagaaaatgcagcaaattcttatctagtccagcatacagcactgcaactgcaagctcatagaaaattattacaatacctaaaaccctagcttttcatttcctgattttctctcctaccagctgcaagattaggaaaactaaccatgtttgcaacccctggtttatgcagatgttcaaactagaagatgtagcaatgggtatatggattgctgaaatgaagaagggtgggttacctgtccaatacaaaacagatgaaagaattaacagtgatggctgcaatgatgggtgcatcgttgctcactaccaagaaccaaggcacatgctatgcatgtgggagaaactcctaaggacaaatcaagcaacgtgctgcaactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0577300, RefSeq:Os02g0577300