Os10g0422300

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Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0422300| Description = Protein of unknown function RIO1 family protein| Version = NM_001071164.2 GI:297610492 GeneID:4348657| Length = 4058...")
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Gene Name

Os10g0422300

Description

Protein of unknown function RIO1 family protein

Version

NM_001071164.2 GI:297610492 GeneID:4348657

Length

4058 bp

Definition

Oryza sativa Japonica Group Os10g0422300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15382940..15386997

Sequence Coding Region

15385116..15385178,15385257..15385370,15385596..15385874,15385980..15386093,15386588..15386660
,15386760..15386797

Expression

GEO Profiles:Os10g0422300

Genome Context

<gbrowseImage1> name=NC_008403:15382940..15386997 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15382940..15386997 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactcaactcaggaacaacaacaggattttggtgtgctactgaagcagggggcggagggaagggtatttgtttcaacatttgtgggacggaagtgtgtaatcaaagagcggttttcaaagaagtaccgacacccattgttggactcaaagttgactcttaaacgcttaaatgctgaagctcgatgcatgacaaaagcaagaaagcttggtgttcccactccagttctttatgccgtggacccacttctgcatacattaacctttgagtatgtggatggcttatctgtgaaagatatactccttggatttgggtcaaacgggatcaatgaagaacaactcattgacatcgccacacaaataggaaatgcagttggcaaactacatgatggaggccttgttcacggtgatttgaccacttcaaatatgataatcaagaacaacacaaatcaactcgttcttattgattttggtctgagtttcatatcaactattcctgaggacaaagcagtggacttatatgtgcttgagagagcattgatttctatgcattcatcatgtggtgatgtgatggagaagattctcacggcgtacagaaaagcttcaaagcaatggtgcgctactacgaacaagctagctcaagtcaggcaacgtggcagaaagcgaacaatgattggatga</cdnaseq>

Protein Sequence

<aaseq>MDSTQEQQQDFGVLLKQGAEGRVFVSTFVGRKCVIKERFSKKYR HPLLDSKLTLKRLNAEARCMTKARKLGVPTPVLYAVDPLLHTLTFEYVDGLSVKDILL GFGSNGINEEQLIDIATQIGNAVGKLHDGGLVHGDLTTSNMIIKNNTNQLVLIDFGLS FISTIPEDKAVDLYVLERALISMHSSCGDVMEKILTAYRKASKQWCATTNKLAQVRQR GRKRTMIG</aaseq>

Gene Sequence

<dnaseqindica>2177..2239#2318..2431#2657..2935#3041..3154#3649..3721#3821..3858#caatgtgcaaatttgccttcgcagttaatcaggtttaggtagggtttcctcctccccttccgcctccgccccagcgccgccgtcgtccccctcctctccggcgaagagccgccgtcgccgccatcaccggagcgagccacggtagcaaccgcaaccaccacaaccatcaccatcctcgtgagccgtcaaggtcagtccccactccctcccgcctcgaccaacccatccattcccccattccccccctccctcttctctcctcccgacctagccacgaccatgatggccacgctcgcgaggagatcgatggtggccttgggccgtcgcgctctgtgctcgggcagcgacctggaggcggcggcgcgcgaagtcgtgtgctccggggcggggagcctcgacgaggtgggcggcgcgctggaccgcctgggcgtggccgtgtcgccggccatggtggcgagggtgatcgatgcgtgtagcgagaggatgggttcagggaggaggctgctgcggttcctgtcctggtgccggtccaaggacgccggtggaattggggacgaggcgttggatagcgcgatcgcggcgctcgcccggatgggggacctcaccgcgatgaggatcgccgtcgccgacgcggagaaggatggccggaggatgtccccggagacgttcaccgttgtcgtcgaggcactcgtgaaattggggaaggaggatgaggctgttcggttgtttagaggcttggagaggcagaggttgctgcctcggcgcgacgcgggtgatggaggggaaggcgtgtggtcgagcagccttgcaatggtgcaggcattgtgcatgaagggccatgctcgcgaggcgcagggcgtcgtgtggcaccacaagagcgagctctcggtagaacccatggttagcatcgttcagcgtagcctgctccacgggtggtgcgtccatgggaatgcgaaggaagctcggagagtccttgatgatatcaagtcttcgtgtaccccactgggtttgccatcattcaatgattatctgcactgcctgtgccataggaacctcaagtttaacccttctgcgcttgtcactgaggctatggacgtcttatcggagatgaggtcctatggtgtcaccccggatgcatctagcctcaacatcttgctttcttgtttgggacgagcaagaagagtgaaagaatcatacagaatcctctacttgatgagagaaggaaaggcagggtgctcccctgactgggttagttactatcttgtggtcagggtcctgtatttaacagggagaattattagagggaaaaggcttgtagatgacatgcttgaaagtggggtgcttccgactgcaaagtttttccatggtctcataggcgttctatgcgggactgagaaagttgaccatgggcttgatatgttcagacttatgaagaggtgtcagttagtggacacacatacctatgatcttcttatagaaaagctttgtaggaatgggagatttgagaatggaaaggagttgtgggatgatgctaaaaagaatggctttatgttaggatgttcagaggatcttttggatcccctgaaaacagaggtattcagaccagtttgtgcagcacaaaaactgagttcgcagagcaataagcgcttggtccaaaagaagaagattggttcagttgagacaagaaagaagggagctgctagagcagccacgaggaaatagagggtctaggtactaccatgtttgagtagatttgcttgttactatttgattctgaaattcttttgtgataacccttgttaacgtgttaccagtcactcaggcatcgatcttttttctgaacatgagcataatcacctaaggtttagtttcgttagagctgttactgtaaaggcactgcaaaccattcacattactatgtgcatttgttaattcaatgtaaacttgtttttatatcagtaaagcagctattcttattgccaaatagaaaagccaccccacttattgatttggaaatgaacttataatcttcttgagcagctactcctaatgttaaagttgttcacaaagcacaacaatatggttgatttttattgtttgactgacatcttatttcgctcgtttttctttctccaatgcagttttcgattgaagggcagtagggcacgttatacttatggactcaactcaggaacaacaacaggattttggtgtgctactgaagcagggggcggagggagtgagtcaggagtcaatatatttagttgcagtttcttacttttacttgtttgttcatagtttgttttgtttgttgcagagggtatttgtttcaacatttgtgggacggaagtgtgtaatcaaagagcggttttcaaagaagtaccgacacccattgttggactcaaagttgactcttaaacgcttaaatgctgtcagtttccataactaacatgctttatttttagatattcctgttttctgtgtagagcatttctctgattttctttgtattagataaatcaaaggctaaaagtgttcaaatattgattgagttgtagtaatatggtaaactgcaatatttagctaaaaaaggttgcacacaactacttatgttgactgaaattcgtgttggcttgattctctcttcaatatgtaggaagctcgatgcatgacaaaagcaagaaagcttggtgttcccactccagttctttatgccgtggacccacttctgcatacattaacctttgagtatgtggatggcttatctgtgaaagatatactccttggatttgggtcaaacgggatcaatgaagaacaactcattgacatcgccacacaaataggaaatgcagttggcaaactacatgatggaggccttgttcacggtgatttgaccacttcaaatatgataatcaagaacaacacaaatcaactcgtgtgtagaacttcctttctgtcagttcatgcattttcttgagtcatttaattcaagacttacatccgagctattaatgtgccactcaatgtgttcatattccaggttcttattgattttggtctgagtttcatatcaactattcctgaggacaaagcagtggacttatatgtgcttgagagagcattgatttctatgcattcatcatgtggtgatgtggtaaggaattgcataaatgatagtcccaaatgataactactttagtttgtttacttcactccttgattattacttaattgcattatggaatatggagttaaactcaccctacagaaaatttatgaccatccttgttgggcttaaccattttttacgctttcacatgctattggtggaatcatgttttgggtggacacttgtgtagaaagtacatctatttcgtttagtcgttctgagatttggggatctgctgtatctgtattccatgtcctatgactatctgattggtttattgacttcataatggcttaaaggagattattgtttagagaaatcttttgacaagtgtggatggccatgtttccattccacgatgtcccataagtctcagatgttctacgggagcatcgcttatctatgacaatcactgccgttattattattctttctgtttcgataagacgataacagcaatccattttatgatgaactagatggagaagattctcacggcgtacagaaaagcttcaaagcaatggtgcgctactacgaacaagctagctcaaggtatggccattgtactgatccttaagcgaagcaccacacaatccatcactcattttaccatctcgccttgacttgcttctgttcttaccaattttacagtcaggcaacgtggcagaaagcgaacaatgattggatgaaagttaagctggaacttgctggacaatacagttgctcgaccagatgattcaacactttacattctcattccctcaatatgtactagttcagtggcattgcttcatgtaacatttgaatggaaaggaatcgttaatagtgatgattattttagctttcactatgaatcgcaaaaatattatatctgctaatttagtgtatc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0422300, RefSeq:Os10g0422300