Os02g0580900

From RiceWiki
Revision as of 02:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0580900| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001053775.1 GI:115446920 GeneID:432978...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0580900

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001053775.1 GI:115446920 GeneID:4329781

Length

4487 bp

Definition

Oryza sativa Japonica Group Os02g0580900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23227791..23232277

Sequence Coding Region

23228059..23228995,23230832..23231385,23231476..23231693,23231810..23231927,23232168..23232170

Expression

GEO Profiles:Os02g0580900

Genome Context

<gbrowseImage1> name=NC_008395:23227791..23232277 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23227791..23232277 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttgctgccggaggaggtcatggtggtggcgccgacgacggcatggttgtcgactaccggggtaacccggtggacaagtccaagaccgggggatggctcggcgccgggcttatcctagggacggagctggcggagcgggtgtgcgtgatgggcatctcgatgaacctggtgacgtacctcgtcggcgacctgcacctctccaacgccaagtccgccaacatcgtcaccaacttcatgggcaccctcaacctcctcgccctcgtcggcggcttcctcgccgacgccaagctcggccgctacctcaccatcgccatctccgccaccatcgccgccaccggggtgagcttgctgacggtggacacgatggtgccggggatgcggccgccgccgtgcgcggacgcgcgcggcgccggggcgcacctgcggtgcgagccggcgcgcggggggcagctggcgatgctgtacgcggcgctgtacacggtcgcggcgggcgcgggggggctcaaggcgaacgtgtccgggttcggctccgaccagttcgacggcggcgacccgcgggaggagcgcgccatggtgttcttcttcaaccgcttctacttctgcatcagcctcggctccctcttcgcggtcaccgtgctggtgtacgtccaggacaacgtcggccggggctggggctacggcgtctccgccgtcgccatggtcctcgccgtcgccgtcctcgtcgccggcacgcccaagtaccggtaccgccgccccgaggggagcccgctcaccgtgatcgggcgggtgctggcaacggcgtggaggaagcgccgcctgccgctccccgccgacgccggcgagctccacggctaccacacatccaaggttgcctacaccgaccgcctcaggtgcctggacagggcggccatcatggaggcggacctggcagcgtcgccggcgaagacgaaccagacatcggcggcgccggcggcgacggtgacggaggtggaggaggtgaagatggtggtgaagctgctgcccatctggtcgacctgcatcctcttctggacggtgtactcccagatgaccaccttctccgtcgagcaggccacccgcatggaccgccacctccgcccgggcgccgcccccggcgggttcgccatcccggcgggctccctctccgtcttcctcttcctctccatcctcctcttcacctccctcaacgagcgcgtcctcgtgccggcggcccgccgcctcacccgccgcccccagggcctcacctcgctccagcgcgtcggcgcgggcctcgtcctcgccaccgtcgccatggccacctccgcgctcgtcgagaagaagcggcgcgacgccgccaacgacggcggcggcggcggcatgatcagcgcgttctggctggtgccgcagttcttcctggtgggcgccggcgaggcgttcgcgtacgtcgggcagctggagttcttcatccgcgaggcgccggagcggatgaagtcgatgagcacggggctcttcctggtgacgctgtccatgggattcttcctcagcagcttcctcgtcttcgccgtcgacgccgccacgcggggggcgtggatacggaacgacctcgacgccggcaggctggacctcttctactggatgctggccgtgctcggggtggccaacttcgccgtgttcctcgtgttcgcgaggcgccacgagtacaagcagcccgccggcacggccgccgtggtggtggcgcccgccgctgccaaggacggcggcgccggcgaggagaaggagatggacgacttcgtcgtggtcaaggaggccgtagaagggatggatgtgtag</cdnaseq>

Protein Sequence

<aaseq>MVAAGGGHGGGADDGMVVDYRGNPVDKSKTGGWLGAGLILGTEL AERVCVMGISMNLVTYLVGDLHLSNAKSANIVTNFMGTLNLLALVGGFLADAKLGRYL TIAISATIAATGVSLLTVDTMVPGMRPPPCADARGAGAHLRCEPARGGQLAMLYAALY TVAAGAGGLKANVSGFGSDQFDGGDPREERAMVFFFNRFYFCISLGSLFAVTVLVYVQ DNVGRGWGYGVSAVAMVLAVAVLVAGTPKYRYRRPEGSPLTVIGRVLATAWRKRRLPL PADAGELHGYHTSKVAYTDRLRCLDRAAIMEADLAASPAKTNQTSAAPAATVTEVEEV KMVVKLLPIWSTCILFWTVYSQMTTFSVEQATRMDRHLRPGAAPGGFAIPAGSLSVFL FLSILLFTSLNERVLVPAARRLTRRPQGLTSLQRVGAGLVLATVAMATSALVEKKRRD AANDGGGGGMISAFWLVPQFFLVGAGEAFAYVGQLEFFIREAPERMKSMSTGLFLVTL SMGFFLSSFLVFAVDAATRGAWIRNDLDAGRLDLFYWMLAVLGVANFAVFLVFARRHE YKQPAGTAAVVVAPAAAKDGGAGEEKEMDDFVVVKEAVEGMDV</aaseq>

Gene Sequence

<dnaseqindica>3283..4219#893..1446#585..802#351..468#108..110#atcctcactgcacaaacgttttctctcctcactatcctgtgcctgctgccttctcttctcatctgcttgcagcagcggtagacagtgcatctcagcagcagaagaaaatggtaacataaacaatgcttgcttgtgctgtatctgtgcatgcagcaggatgcatgtattttttttatacgaagttctattagagcaggaaaaaaataacaagattacaatcctgtaagcctataaagccgtaactagaaaaaaaatatataccaccacgcacacaccgacagtgcatgcatgttttcattggtggtttggtttggtgattgagttgttaagctggatgtatgtttgtgcaggttgctgccggaggaggtcatggtggtggcgccgacgacggcatggttgtcgactaccggggtaacccggtggacaagtccaagaccgggggatggctcggcgccgggcttatcctaggtacgcgtcgtcttcactgctggtcgcgactcgcgagttcgatcgtgggaaaaagtttggttgatttgagctcgagatgacatgccatggcggcggcggtggttgttaatttgcagggacggagctggcggagcgggtgtgcgtgatgggcatctcgatgaacctggtgacgtacctcgtcggcgacctgcacctctccaacgccaagtccgccaacatcgtcaccaacttcatgggcaccctcaacctcctcgccctcgtcggcggcttcctcgccgacgccaagctcggccgctacctcaccatcgccatctccgccaccatcgccgccaccgtacgctctcgctctcgcacacacagaacaacacatcttcgatcatcctcgcgcggtgcaggaatctcactacgatctgctgccatgcagggggtgagcttgctgacggtggacacgatggtgccggggatgcggccgccgccgtgcgcggacgcgcgcggcgccggggcgcacctgcggtgcgagccggcgcgcggggggcagctggcgatgctgtacgcggcgctgtacacggtcgcggcgggcgcgggggggctcaaggcgaacgtgtccgggttcggctccgaccagttcgacggcggcgacccgcgggaggagcgcgccatggtgttcttcttcaaccgcttctacttctgcatcagcctcggctccctcttcgcggtcaccgtgctggtgtacgtccaggacaacgtcggccggggctggggctacggcgtctccgccgtcgccatggtcctcgccgtcgccgtcctcgtcgccggcacgcccaagtaccggtaccgccgccccgaggggagcccgctcaccgtgatcgggcgggtgctggcaacggcgtggaggaagcgccgcctgccgctccccgccgacgccggcgagctccacggctaccacacatccaaggttgcctacaccgaccgcctcaggtaatcaacgcacaatctttcatgaggggagatcccgctcttttctcccacaagagttgaatggagattaatattttcgtgacacgtttttcaaactgctaaatggtgtgttctgtgtgaaaactttctatatgaaagttgctttaaaatatcatattaatttattttttaaatttgaaataattaaaactcaaaatcaattatatgttaatatcatctcgttttacgtaaaaaaaacttaatattcatcttcagaagaaaagaataccacctcagtctcaaaccgtagaatgtataatcgccacgtggttctcttttctcctaataatatacaaagttcagttagatatatgatctcctcgactatagaaaattagcttcagatcatacactcgtggttgtcatcaggcatcatccgttagtagttaactcgttgctgtcctagctttgttgattgattaatatatagctggaagaaacatgttttggttgggatgcaaaatgcattatattgctaagtagacatggatgaatgttatttcttcagagtttacgtgacacgatgtgctctgctgatagtacaatactgctgctgtcaaccggtgcatataggagatcagggttcagatttcaggattggattcttgtggctgctgattttgccaaaacatttgcttgctatttaaattctatcaatcgatcgtatcgtttgaaaatacatggcagaactgagctttcaaaacactccgttttttcagctctagccacatagcctttccatggttagtatcaactggtgccaataggatgtgaactggtagagcttgctagctagtagtatgtacttctacctaggcatgagggttaatctagctatcgatcacaagtctataatctattattagcacggtacttaattggcttcaccggttaggtcactgtcaaggctgagatggacacgagctatagagaagaagctgaggacgacaactcagttcgccctcttgctaacacagcacgcaagagcaaatcatgcatggtactagatgaaatgaatgagtggtcaaagtgagtgagacatcgaattgattagaacacccaattagtatgtgagacacccaattaattagagataacattcaccaaattgggcggccggctgatggacgaagcagatcacaagtagagtgacgagccgtgaattcagtagtctagaggtggattttttgtcgtttatttccgtcacctaaaagtaaaaatatataaaaaaaatacaagatgtattagtatgatatattcacttaataagcatgtaaaccaaatttcatatatgcaaataaaaagaataaatttgacattgtgcccgcgagcatatgtggggtggtgacacagggatgtgttgtgtacacaacacaaattgcattaactgaggctcgagatgcatatctgaaacagtcagattggtgcaccggccggcctatacgtgcattgctagagaagttcagatccttaaagaattcgcttcattttgatcacaaaagatgcccaatcattcacatccatctttttttgtataatggataaaatccggccaccatcgaagaagagagagacacttatcaaaagaacgattctattgttaaatctccatctgaaaatcacttattcacatccatctggcatctgcgttttgctaacacgaacacaactgaaaatcatctgatgatctctgtcgtatatatatgtacacacgtgtcaatttttttttacttgctacctagcttgttagatacttggatccgtacatacgttgctgactgggtttttgccatgcaggtgcctggacagggcggccatcatggaggcggacctggcagcgtcgccggcgaagacgaaccagacatcggcggcgccggcggcgacggtgacggaggtggaggaggtgaagatggtggtgaagctgctgcccatctggtcgacctgcatcctcttctggacggtgtactcccagatgaccaccttctccgtcgagcaggccacccgcatggaccgccacctccgcccgggcgccgcccccggcgggttcgccatcccggcgggctccctctccgtcttcctcttcctctccatcctcctcttcacctccctcaacgagcgcgtcctcgtgccggcggcccgccgcctcacccgccgcccccagggcctcacctcgctccagcgcgtcggcgcgggcctcgtcctcgccaccgtcgccatggccacctccgcgctcgtcgagaagaagcggcgcgacgccgccaacgacggcggcggcggcggcatgatcagcgcgttctggctggtgccgcagttcttcctggtgggcgccggcgaggcgttcgcgtacgtcgggcagctggagttcttcatccgcgaggcgccggagcggatgaagtcgatgagcacggggctcttcctggtgacgctgtccatgggattcttcctcagcagcttcctcgtcttcgccgtcgacgccgccacgcggggggcgtggatacggaacgacctcgacgccggcaggctggacctcttctactggatgctggccgtgctcggggtggccaacttcgccgtgttcctcgtgttcgcgaggcgccacgagtacaagcagcccgccggcacggccgccgtggtggtggcgcccgccgctgccaaggacggcggcgccggcgaggagaaggagatggacgacttcgtcgtggtcaaggaggccgtagaagggatggatgtgtagacgtgtagtgtgtacgaatgttagtgtgcaatcgtagtatagaggtttgggtttttgaggtagtgtgcgtagcagttttcgtgcagagtgcagtgtatgatatgatatgatgctagcttcaatctcctgaaaaatgttaatggagatagatgagctgaggtaatgtttgccaagtgaagatattttgaaaaaaaaaagtgttgtaaatttcccagagctttcaattttgctttcagaactacttctatgaaaacacattgtcaatgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0580900, RefSeq:Os02g0580900