Os02g0590400

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Revision as of 02:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0590400| Description = Lecithin:cholesterol acyltransferase family protein| Version = NM_001053819.1 GI:115447008 GeneID:4329826| Length = ...")
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Gene Name

Os02g0590400

Description

Lecithin:cholesterol acyltransferase family protein

Version

NM_001053819.1 GI:115447008 GeneID:4329826

Length

2775 bp

Definition

Oryza sativa Japonica Group Os02g0590400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23663547..23666321

Sequence Coding Region

23663709..23664615,23665749..23666164

Expression

GEO Profiles:Os02g0590400

Genome Context

<gbrowseImage1> name=NC_008395:23663547..23666321 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23663547..23666321 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatctatcgttcctgtactcctgcgcctgctgctcctgctgctcccgcttcccctgatccgagaccacctctggccgagccaccgccggccaacgccgcaggacgatgcgggtgagctccacccgatcttcctggtgcccggggcgagctgcagcgacctggaggcgcggctcaccgaggcgtaccggccgtcgacggcgcactgcggcgcgatgaaggggaagggatggtttgggctgtgggagaacaacacggagctgctggtccacgactacgcggactgctcactggagcagatgaccctggtctacgaccccgccgccaacgagtaccggaacctgcccggcgtcgagacccgggtgcccaacttcggctccgcatggtcgttcggctacaagaaccctgttaaccgtctacagagagcacaatgccttggaaagctcagagactggctggaagaattgggataccgtgatggggacaccatgttcggagctccctatgattttcgctacgccccgccggtacccggccaaacatccgaggtgtactctcgctacttcagcgagttcatggcgctcgtcgaggcagcgaccaagaagaagcagaagaaggccgtcatcctggggcacagctacggagggatggtcgcgctcgagttcgtcaggagcaccccgcgggcgtggcgggacgcgcacatcgagcgcctcgtcctggtcgcgcctacgctccaagatgggttcgtaggctcggtgatgaagttcatcacggggacgggcataattttcgtcccgacagccacgtccacgaggcccatgtggaggagcttcgagtccgccatggcgagcttcccgtccccggccgtgttcggccgcgagccgctcgtggtcaccaagaggagggactactccgcgtgcgacatggaggatctcctagccgccctcggcttcggcgagggcgtcgagcctttccggcgacgggccgtccccaggatgtacagcctcgaggcgccgatggtgcccatgacgtgcatcaacgcggtgggcaacaagacgccgctgcaactggtgttgtgggacgacgacgacgatgacttattagacgcgtcaccggaggtggcagcgtatggtgacggagacggcgagatcaacctgatcagcatgttggcgtttgacacggagatgggtcggcagccaggacaggagaagcgattcaaatccgtcaagatagctaatgctaaccattccacgattgccatttatgattttgcactaaagaggatcattcaagaaattattgaggtgaatcaggtacgttag</cdnaseq>

Protein Sequence

<aaseq>MASIVPVLLRLLLLLLPLPLIRDHLWPSHRRPTPQDDAGELHPI FLVPGASCSDLEARLTEAYRPSTAHCGAMKGKGWFGLWENNTELLVHDYADCSLEQMT LVYDPAANEYRNLPGVETRVPNFGSAWSFGYKNPVNRLQRAQCLGKLRDWLEELGYRD GDTMFGAPYDFRYAPPVPGQTSEVYSRYFSEFMALVEAATKKKQKKAVILGHSYGGMV ALEFVRSTPRAWRDAHIERLVLVAPTLQDGFVGSVMKFITGTGIIFVPTATSTRPMWR SFESAMASFPSPAVFGREPLVVTKRRDYSACDMEDLLAALGFGEGVEPFRRRAVPRMY SLEAPMVPMTCINAVGNKTPLQLVLWDDDDDDLLDASPEVAAYGDGDGEINLISMLAF DTEMGRQPGQEKRFKSVKIANANHSTIAIYDFALKRIIQEIIEVNQVR</aaseq>

Gene Sequence

<dnaseqindica>1707..2613#158..573#gcgttgattctgctcgtttagctagcccgcctctgacgctgcattatggagggagtaggcttgtagctagcccgcctctgcacgctatatttcaaggaatcagagatccatacagacagagacgttcagccatcagacctgcagaggcaatccatccatggcatctatcgttcctgtactcctgcgcctgctgctcctgctgctcccgcttcccctgatccgagaccacctctggccgagccaccgccggccaacgccgcaggacgatgcgggtgagctccacccgatcttcctggtgcccggggcgagctgcagcgacctggaggcgcggctcaccgaggcgtaccggccgtcgacggcgcactgcggcgcgatgaaggggaagggatggtttgggctgtgggagaacaacacggagctgctggtccacgactacgcggactgctcactggagcagatgaccctggtctacgaccccgccgccaacgagtaccggaacctgcccggcgtcgagacccgggtgcccaacttcggctccgcatggtcgttcggctacaagaaccctgttaaccggtaagtttcgctcctaccaaccacgagtccacgaatcacctgattaaaatggcaatatactctctcggtcccttattcccagaaaaaaaccaacctagctatagctagagcctgtttagatcaatttactatgccaattttttttggtaaatgttttgatggcaaaagatttggcattgaagttttggtagttggtgtttagatgcatggtaaaattttaccagtttattagtaatgacagagagagcacggctcccaacacactttttggcaaaatgtgttactctaggctcccaaatgataaataccaaattgctaactttttaccactagtgtttagatccatttcggtaaaaattgttccaaaacaatcaaacttttgccattttggaggaactaaacagggccctagtttgtgggacagatgagcacatggagagtggattttaaaccatccactcgttgtttacatgtcactagttataaaaatatttagaaaactatgagaagatatactctcccttttttttatccgctgaactaggcctaaccctagtactgccaccatgtggatctgccttccatgcatttccacctccaattgatgcaaaaatcgatttctcactactcccccatcatttttcatttccattttaattcaacttttaattcatcgaacctgcattgtgggttgagttgagccgaagagagacaagccgagcagagaaagatatcagactgggttggggctgaaaaagatagtttaaaatagtttcccatacacatgcatagctgactcttgaaaagagaaagaatcattagtacttcttccttcaatttcagaaataaattatgttttagataagattgtagtgaaagtcttaaagctttaactattaatattcttttaaaaaatagtgtgtgtgtgtgtatatatatatatatatatatcatacaaagaactataataaaaatacagttgtatttatttatgtatatattataaaaaagtagtaaaaagatatattatgaagaccattttgttgttcaaaacgttaacaattatacaaaccggtgaaattacgtgattcaatgctggagtaattgcttgattacatatatatatattttagtctacagagagcacaatgccttggaaagctcagagactggctggaagaattgggataccgtgatggggacaccatgttcggagctccctatgattttcgctacgccccgccggtacccggccaaacatccgaggtgtactctcgctacttcagcgagttcatggcgctcgtcgaggcagcgaccaagaagaagcagaagaaggccgtcatcctggggcacagctacggagggatggtcgcgctcgagttcgtcaggagcaccccgcgggcgtggcgggacgcgcacatcgagcgcctcgtcctggtcgcgcctacgctccaagatgggttcgtaggctcggtgatgaagttcatcacggggacgggcataattttcgtcccgacagccacgtccacgaggcccatgtggaggagcttcgagtccgccatggcgagcttcccgtccccggccgtgttcggccgcgagccgctcgtggtcaccaagaggagggactactccgcgtgcgacatggaggatctcctagccgccctcggcttcggcgagggcgtcgagcctttccggcgacgggccgtccccaggatgtacagcctcgaggcgccgatggtgcccatgacgtgcatcaacgcggtgggcaacaagacgccgctgcaactggtgttgtgggacgacgacgacgatgacttattagacgcgtcaccggaggtggcagcgtatggtgacggagacggcgagatcaacctgatcagcatgttggcgtttgacacggagatgggtcggcagccaggacaggagaagcgattcaaatccgtcaagatagctaatgctaaccattccacgattgccatttatgattttgcactaaagaggatcattcaagaaattattgaggtgaatcaggtacgttagtagacactccgtacgttgggtttcacgtatatatgttgggtttcactgtgcgcggtaatcatatatatcacgtgtggaattctgtgtaataaatgaatcccatgcagctttgtgtataccgatgggttggttggtaaataaaaaccaaaaattactgctccc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0590400, RefSeq:Os02g0590400