Os02g0592600

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Revision as of 02:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0592600| Description = Copper amine oxidase family protein| Version = NM_001053830.1 GI:115447030 GeneID:4329838| Length = 5796 bp| Defini...")
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Gene Name

Os02g0592600

Description

Copper amine oxidase family protein

Version

NM_001053830.1 GI:115447030 GeneID:4329838

Length

5796 bp

Definition

Oryza sativa Japonica Group Os02g0592600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23791965..23797760

Sequence Coding Region

23793418..23793681,23793785..23795089,23795259..23795990

Expression

GEO Profiles:Os02g0592600

Genome Context

<gbrowseImage1> name=NC_008395:23791965..23797760 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23791965..23797760 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttcaaagagaggaggaggtggccgccgtggtcgtggctgtggccgtgggagaagtgctttggctgaaaatgacatggactttcatgaaacctccacaccttcttccccaagtactacttctgataaagaggacaatgttgagtttactccgcagcaaagcccactaccttgtcttgtaagcccatcagtagagcatgtatccaacacattactcaatccaaagatcaaccaccgatcggacgcaatcttcggtgatcaggctgtggaacagttgaagttgcgacatcacaaacctttaaaatttcatgagagataccgtccttatttgagggatgctggcttgcttgggctctcacaaatttgccagaagatgcctcagttggacaaggcattgatcactgcccttgttgagcgttggagaccagaaactcatagtttccacctggcttctggggagatgacagttacactacaagatgtctcaatgttgttagctcttcctatcgatggccgtccagtttgttctaccactgatcatgattatgcgcagatggtcattgattgtctaggtcatgatccaagaggaccatcaatgcctggaaaatcttttctgcactacaaatggctaaagaagcatttctatgaattaccagaagggacagatgatcagactgtggagaggcatgttcgagcatatatcctgagccttctatgtggggtgctatttccagatggaacaggacggatgagtctgatatatcttccactgattgctgatctttctcttgttgggacatacagctggggatctgcagtgctggccttcctataccgttctctttgttctgttgcttcctcccacaatatcaagaacattggtggttcattgcttctcttgcagctttggagctgggagcgctcccatgttggcagaccgttggtccggtctcccgtgtgcccagagacagacattccacaggatgtgctcccagttggctttcgttgggtaggtgctcgcacacaaagtgagaatgctacacgctgtcttaagcagtacagggatgaactgaatctgcagcgagcagatcaggtgaagtgggagccgtacttgcacattgagtctgcaagcttgccactgctttgtacaaaaaatgctgacttgtggcttacacaagctccactaataaattttccaatagtcgagatgtatttgcctgagcgagtgatgcggcaatttgggcttcgccaatccattccaccaccttttcggcctacactacaggcgctgcatcgtattagtcgacgtggcagagaacgtgagaactgggaagagacacatcatgagtacattcaggaatgggaagcccgccgacagcgcatatttccagagtcagagcagtatgacccgtcttcttatgaggagtacctgcattggtacacaggggctacacggcggtatcttgtaccatcaatcagtgatgatgtggaagcaggatcttcattacagcctgatgactccattaatcttcattatcaagccaaggctcctatgatccgcaaagcagttgataaactgcatggtatggtaaagaaggccaagatagccatggcgtccacagctgatacaaccacacaagccttggtctttgagtttctgcatggctttcaagatgttcttcacgaccttggcgagatcaaggaaaatggtggttcagctactagtccacatgttgaatcagctgccactcaagacatgcctctacttttgctagaaactgaacagaacattgtggatgccgatcaagaagctcaacaccaggaagaggaagagcttcacatggtggatgatgcaacaatgacccttgagcctatggatgaggagaacaatgatttcaacaatgtcatctgtccatgtccttcactggagttggaggaacattgtcacttagctacaccagccatcgatgagtgtaatacagccactcctgctccagactctgtaattccacagcagaacactgattttgatcaagatggacatctggaaaatcctaatgaaatggaccagattgaactgatggtggaacctatatgtgtggatcacaatgattccgacaatgtgctctcatccagcccgtcagctcaggcactggaggagaattgtgaagtagcaaaggcagtcaatggaaatgtcgatccaaccacccaagttactggctcatctaccccacaacaggacacagatgtcaaactagttgctgaacaggaaaacccaggcacaacagagggcaactaa</cdnaseq>

Protein Sequence

<aaseq>MSSKRGGGGRRGRGCGRGRSALAENDMDFHETSTPSSPSTTSDK EDNVEFTPQQSPLPCLVSPSVEHVSNTLLNPKINHRSDAIFGDQAVEQLKLRHHKPLK FHERYRPYLRDAGLLGLSQICQKMPQLDKALITALVERWRPETHSFHLASGEMTVTLQ DVSMLLALPIDGRPVCSTTDHDYAQMVIDCLGHDPRGPSMPGKSFLHYKWLKKHFYEL PEGTDDQTVERHVRAYILSLLCGVLFPDGTGRMSLIYLPLIADLSLVGTYSWGSAVLA FLYRSLCSVASSHNIKNIGGSLLLLQLWSWERSHVGRPLVRSPVCPETDIPQDVLPVG FRWVGARTQSENATRCLKQYRDELNLQRADQVKWEPYLHIESASLPLLCTKNADLWLT QAPLINFPIVEMYLPERVMRQFGLRQSIPPPFRPTLQALHRISRRGRERENWEETHHE YIQEWEARRQRIFPESEQYDPSSYEEYLHWYTGATRRYLVPSISDDVEAGSSLQPDDS INLHYQAKAPMIRKAVDKLHGMVKKAKIAMASTADTTTQALVFEFLHGFQDVLHDLGE IKENGGSATSPHVESAATQDMPLLLLETEQNIVDADQEAQHQEEEELHMVDDATMTLE PMDEENNDFNNVICPCPSLELEEHCHLATPAIDECNTATPAPDSVIPQQNTDFDQDGH LENPNEMDQIELMVEPICVDHNDSDNVLSSSPSAQALEENCEVAKAVNGNVDPTTQVT GSSTPQQDTDVKLVAEQENPGTTEGN</aaseq>

Gene Sequence

<dnaseqindica>1454..1717#1821..3125#3295..4026#gggattttcttttcttttttttttttccgtcgcttcttcgcgccgcctcccctcgacgccggcgccgccgctctcgtgagccaccgccaccgccggcgccgccgctctcgtgagccaccgccaccgccggcgccgccgagcctcctcctccggcaagacgtctcatccaggcctctccctccccctcagacgccgcctctgcgcctccattctcgagatccgaggtgagcccttcttcttcctcttcccctctcctcttttctccagggttccgcagtgacaggacggaggaagcgggaggatgcaggaggggagaagagcctcgaggatgcatcgtgctcctcgcttcgtccacttcctctcctcctcctcctcctcctcctcctagggttgcgttgagtcggtgacacatgggacctcactccctggtttgcttgcagcggcggattgctagctccttggatggcagttctagcttgtagttcttatttgacgaaatcgtgatcttgtgaatattaacatggaacagttgtagctcgtagttcttctttgatgaatcttgatctggtgagtatcaacatggaaggagtggaagctaggtcgctcgctgctcactctacacagcagcatgttttctgatgttttacatttgctgaatactgtcaacataattgaacttttactttgtcattacttggtatatccacagtttgtctcgtcttccacctccggccaccggatttagtgccggtcatggttatagcttgattttgagtcctagggtgtgtgtgatcggtgattcgccaccagcggccatggggtggaggggcgagcaacgggcgtagcaagccgaagagccacacttgtaggagggggcagggggacggagccgtgggtggccggcgaactgaattgctagagctaggcacatcgtcctcaagggcgcgtctcggcacaaggcgcaggtacaatcctctaatgtcatcttcccgtagattctcactcttcaagtctcagttccttggttgtcactggaaaatcatactacgaaaatggaatccactgttgtgtttgtttggtggcatgcatatgtagatcaatatagcaagttcaatcgatgtaggctcgtctgggacactcgaaatgaaatgattttgcagaattcattttgaaaattctcttttcgaagcgagtcataaagaggaatatgcatgttttccccccttttctccctcttttttcgtgatcaggttagtggagagacccccctctgcattgttcaagacttcagactcgctactaaagtgtgcacacccattgcagctttcagggcttcaccactgcataaattctcaacatatgcttgtgttttttttactgtcaagtgtcaacgtctgtgccttttccctgactggtctcatgaatttcccaaatactagaacagtacaggatcatgtcttcaaagagaggaggaggtggccgccgtggtcgtggctgtggccgtgggagaagtgctttggctgaaaatgacatggactttcatgaaacctccacaccttcttccccaagtactacttctgataaagaggacaatgttgagtttactccgcagcaaagcccactaccttgtcttgtaagcccatcagtagagcatgtatccaacacattactcaatccaaagatcaaccaccgatcggacgcaatcttcggtgatcaggttaatctaagagcaattaagttttgtcatagttgcatgagtaacaagttcttgtaggaagaataaactttgcagtctgactgaggtcaatgtttttttgcaggctgtggaacagttgaagttgcgacatcacaaacctttaaaatttcatgagagataccgtccttatttgagggatgctggcttgcttgggctctcacaaatttgccagaagatgcctcagttggacaaggcattgatcactgcccttgttgagcgttggagaccagaaactcatagtttccacctggcttctggggagatgacagttacactacaagatgtctcaatgttgttagctcttcctatcgatggccgtccagtttgttctaccactgatcatgattatgcgcagatggtcattgattgtctaggtcatgatccaagaggaccatcaatgcctggaaaatcttttctgcactacaaatggctaaagaagcatttctatgaattaccagaagggacagatgatcagactgtggagaggcatgttcgagcatatatcctgagccttctatgtggggtgctatttccagatggaacaggacggatgagtctgatatatcttccactgattgctgatctttctcttgttgggacatacagctggggatctgcagtgctggccttcctataccgttctctttgttctgttgcttcctcccacaatatcaagaacattggtggttcattgcttctcttgcagctttggagctgggagcgctcccatgttggcagaccgttggtccggtctcccgtgtgcccagagacagacattccacaggatgtgctcccagttggctttcgttgggtaggtgctcgcacacaaagtgagaatgctacacgctgtcttaagcagtacagggatgaactgaatctgcagcgagcagatcaggtgaagtgggagccgtacttgcacattgagtctgcaagcttgccactgctttgtacaaaaaatgctgacttgtggcttacacaagctccactaataaattttccaatagtcgagatgtatttgcctgagcgagtgatgcggcaatttgggcttcgccaatccattccaccaccttttcggcctacactacaggcgctgcatcgtattagtcgacgtggcagagaacgtgagaactgggaagagacacatcatgagtacattcaggaatgggaagcccgccgacagcgcatatttccagagtcagagcagtatgacccgtcttcttatgaggagtacctgcattggtacacaggggctacacggcggtatcttgtaccatcaatcagtgatgatgtggaagcaggatcttcattacagcctgatgactccattaatcttcattatcaagccaaggctcctatgatccgcaaagcagtaagccatattatctattcagttcctacgatcagtttctaaagttaattggacctaaatttgtttcagatacacgtgctgtcttttgcaagacttcaaatagtttttacaagcagtccatgcataatttaactaatatatttaacttgaaggctgctgattgttgtaggttgataaactgcatggtatggtaaagaaggccaagatagccatggcgtccacagctgatacaaccacacaagccttggtctttgagtttctgcatggctttcaagatgttcttcacgaccttggcgagatcaaggaaaatggtggttcagctactagtccacatgttgaatcagctgccactcaagacatgcctctacttttgctagaaactgaacagaacattgtggatgccgatcaagaagctcaacaccaggaagaggaagagcttcacatggtggatgatgcaacaatgacccttgagcctatggatgaggagaacaatgatttcaacaatgtcatctgtccatgtccttcactggagttggaggaacattgtcacttagctacaccagccatcgatgagtgtaatacagccactcctgctccagactctgtaattccacagcagaacactgattttgatcaagatggacatctggaaaatcctaatgaaatggaccagattgaactgatggtggaacctatatgtgtggatcacaatgattccgacaatgtgctctcatccagcccgtcagctcaggcactggaggagaattgtgaagtagcaaaggcagtcaatggaaatgtcgatccaaccacccaagttactggctcatctaccccacaacaggacacagatgtcaaactagttgctgaacaggaaaacccaggcacaacagagggcaactaactataatggtgtcccctcatctgcagaggagacaggcgattctgatttcacccctcatcatgtcacctttgtatagtgactagttatgtttgccatgttgatttttttgacattagaagttcttttttttgtatttatattcattgatggtagtattctgcttcatctccaatgtaatatgggaatggatatattaagccctagtgtatactgtatactacctccatcccaaaatgtagttacctagtactcaactggacacctcctagtactataaaactggacaggggtgtccaatttcgtactaggtagcaaaattttgggatggaggtagtaatggttttccttagaagatgcttaactttataattgatgagcatattagtgatagtgacagttagatggatgatgctgcatctactactggccaatatgatcagcaagataaagattggagctgcttcatatctccacttcatcaaatttatagaaggtaaatgattctttattatctagtatgaaggtgtacactgaacttgttgctgcactgtctttagtgttagctaatataacttttgcgcttttattagctgtgcccttctcatatacctatggactactgagtcagcagtaaccatttatagtacttgtgtgtcatactgatttaaatgaactgtgcaggtatttgttacggtaaagtgctttagagctattcatggtagataggtcaaatttcttcgatttcgaggtacatccttgatgatactctagtttgcgttgttggaatcatatagcacactacagctgcctaaatattttaaagatgcatatgatttttatctaggatacagaaagcatgtaaacatgcttatttatcgggcaaccattcatacaaaacctccttatttgaacaacattttcctagctacccaggttggtgttcttctgcaaagttcaatgttgaaatctgctcttactggaagttttaatcaattgcatttttatttgagacctgagtaaatatgtaagaagttgcaattgacagagtgctgggctagatgggaggttgatatgcaatcaaccaccttttcagcccaacatgttaagtgtattcaagatttaagtagatctgtccttttgtgcagattagcaattttgactacctgatggaactgaacactcttgctgggcgcagttacaacgacattgcacatgcatgtttgcttcataactctcattttctgatctaataaatctactactgtgtttaaatgatcactagtaatttatgcaataccctgtttttccatggatattagcagattaccactccaaaacattttggatctggaagatctgtctggcgtccgcatactgagatcttccaaaagtggattctgtacctcattccttgctgccaatttggacctcttctgtgcattttttttcttttccattcatttactctggggatgatatcttgttcaataactgctgatagtgatacttcaaaattttcaatgcagccggttggcgctctgaatcctgcatgactggagaaaccccaagaacattactctagtttcaacgacccaatcatcccaaaatttcacctaccgttcacattgctcctgtcctggcatggtaccttttcttagattatgcatgttttgtgtcagcattttgcttgtgtgttgccccttttgtttggagttagattaatttattgtcatcccatttgattaatcggttctctactgttcatcaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0592600, RefSeq:Os02g0592600