Os02g0595800

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Revision as of 02:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0595800| Description = Similar to Eukaryotic initiation factor 4B (Fragment)| Version = NM_001053851.1 GI:115447072 GeneID:4329860| Length ...")
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Gene Name

Os02g0595800

Description

Similar to Eukaryotic initiation factor 4B (Fragment)

Version

NM_001053851.1 GI:115447072 GeneID:4329860

Length

3799 bp

Definition

Oryza sativa Japonica Group Os02g0595800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23974200..23977998

Sequence Coding Region

23974200..23975356,23977424..23977801,23977974..23977998

Expression

GEO Profiles:Os02g0595800

Genome Context

<gbrowseImage1> name=NC_008395:23974200..23977998 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23974200..23977998 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccaaggcctggggcggcctcggcggcgccggcgcgtgggcgctggacgccgagcgcgccgaggaggaggagcgggagagcgccgccgcacccgccccggccgcggggttccccagcctccgcgaggccgccgcgggtgcggccgccggcaagtccaagaagaagaaggggaccaccctctcgctctccgagttcaccacctacggcgccgccgccgggaggcggcccgccgccgcggccgcggagcccaaggggctcacgccgcaggagatgatgatgctgcccaccgggccgcgggagcggtccacggaggagctcgatcggtcccgcctcggcggcgggttccgctcctacggctccggggagcgccgcggcgggttcgacgacgacggccgccgcggcggccccgggagggacgcggatctcgacatgccgtcgcgcgccgacgagtcgggcaactggtcgctcaacaagaagtcgttcacgccgtcgcccgccgactcgggcgcccggagcaggtacggatccctcgggggcggcggcggcggcgcccccgccgcttcctccttcggccgcgccgacgacgacagcgactggtcgcgcgggaagaagccgatgccaatgccgtcccgctacccgagcctcggctccggtggcggtggcggtggcttccgcgactcgcctacctcgaccgactccgaccgatggtcccgtgccgctcctctgcctccgcacaatggcgagcgtgagcggccacgcctagtgcttgatccgcccaagcgggatgcctcggctacccctacgccgcctcctgccgaggcggcacgcagccggccaagcccatttggcgccgcgaggccccgcgaggacattcttgctgaaaaagggctggactggaggaagatggagacagagattgatcataagactagccgcccaaccagctcacagtctagtaggccaggaagtgcgcattcgtctcttcctgggagccctggatcacagacatcagctgtgggtagtgaaggtgtgccgagggctcggccgaaggttaatccttttggggatgcgaagccaagagaggtagttcttcaggagaaaggcaaggattggagaaagattgatcttgagttggagcatcgtcgaattgatagaccggagacaaacgaagagaaggatttgaaagaacagattaacctgcttagggtggatttgaaagaaactgaagcaaacataagtgacgaggataaaaaaggtttatcagaaaagttatcccagatggaaagggaactggagcgtcttacagttgagttggacaacaaggttcgatttgggcaaagacctggttctggatctggcaaggttactgcacatttaagtaattcaccagacgaatcacagattacagagtcaatggaacaaccacgttcccgtagcagcatagaccaaaatcctaaaccagcagaagaaaggtgggggtttcagggcaacagggacagaggctcatttggtggtaacagaaatacagacaggtcgttaacagggcagagatggtga</cdnaseq>

Protein Sequence

<aaseq>MSKAWGGLGGAGAWALDAERAEEEERESAAAPAPAAGFPSLREA AAGAAAGKSKKKKGTTLSLSEFTTYGAAAGRRPAAAAAEPKGLTPQEMMMLPTGPRER STEELDRSRLGGGFRSYGSGERRGGFDDDGRRGGPGRDADLDMPSRADESGNWSLNKK SFTPSPADSGARSRYGSLGGGGGGAPAASSFGRADDDSDWSRGKKPMPMPSRYPSLGS GGGGGGFRDSPTSTDSDRWSRAAPLPPHNGERERPRLVLDPPKRDASATPTPPPAEAA RSRPSPFGAARPREDILAEKGLDWRKMETEIDHKTSRPTSSQSSRPGSAHSSLPGSPG SQTSAVGSEGVPRARPKVNPFGDAKPREVVLQEKGKDWRKIDLELEHRRIDRPETNEE KDLKEQINLLRVDLKETEANISDEDKKGLSEKLSQMERELERLTVELDNKVRFGQRPG SGSGKVTAHLSNSPDESQITESMEQPRSRSSIDQNPKPAEERWGFQGNRDRGSFGGNR NTDRSLTGQRW</aaseq>

Gene Sequence

<dnaseqindica>1..1157#3225..3602#3775..3799#atgtccaaggcctggggcggcctcggcggcgccggcgcgtgggcgctggacgccgagcgcgccgaggaggaggagcgggagagcgccgccgcacccgccccggccgcggggttccccagcctccgcgaggccgccgcgggtgcggccgccggcaagtccaagaagaagaaggggaccaccctctcgctctccgagttcaccacctacggcgccgccgccgggaggcggcccgccgccgcggccgcggagcccaaggggctcacgccgcaggagatgatgatgctgcccaccgggccgcgggagcggtccacggaggagctcgatcggtcccgcctcggcggcgggttccgctcctacggctccggggagcgccgcggcgggttcgacgacgacggccgccgcggcggccccgggagggacgcggatctcgacatgccgtcgcgcgccgacgagtcgggcaactggtcgctcaacaagaagtcgttcacgccgtcgcccgccgactcgggcgcccggagcaggtacggatccctcgggggcggcggcggcggcgcccccgccgcttcctccttcggccgcgccgacgacgacagcgactggtcgcgcgggaagaagccgatgccaatgccgtcccgctacccgagcctcggctccggtggcggtggcggtggcttccgcgactcgcctacctcgaccgactccgaccgatggtcccgtgccgctcctctgcctccgcacaatggcgagcgtgagcggccacgcctagtgcttgatccgcccaagcgggatgcctcggctacccctacgccgcctcctgccgaggcggcacgcagccggccaagcccatttggcgccgcgaggccccgcgaggacattcttgctgaaaaagggctggactggaggaagatggagacagagattgatcataagactagccgcccaaccagctcacagtctagtaggccaggaagtgcgcattcgtctcttcctgggagccctggatcacagacatcagctgtgggtagtgaaggtgtgccgagggctcggccgaaggttaatccttttggggatgcgaagccaagagaggtagttcttcaggagaaaggcaaggattggagaaagattgatcttgagttggagcatcgtcgaattgataggtatgccataaatggatttgcctctttataacaaagtttaccttttatagtatgcacaactgtgcaattagcatttgtctttgaatgcaatactgatcaaaacaattgaatctttgggcctgtgaccttaacaattatagagtgtgtttagccatgacctttggctgctttatgcttgtgagttgtggtggtgcttaagtgaaatagctttttgcagaagcatttcggcagcaccttgcaatagttcaagtcagccagacattagttctaattcagctatgcactcttaagtagtttctatgcttctttaagcaaattaattttgcacagtgtttacgaaataagcgtggcattttttttttgtgcttgctggttatttcaatggttatataacaatgagcagttgtatgaattgaacggatataccttttttctttttttgctttgctttgagagattatgagaactgcatttacagcaataactagttatggtcttatggatagtaactataatgggaaacttgtattttttttcattaccttttccatttaaatgtcttcttattagtccatatactcccattgtaagaacctgggaggaaaaacttttattcctaatgaaaactggttgggacctgtgcatgcatttcctatttatatattaaccttttaaaggacatggtcaaattacaaaaaccataaagattccaagtatatgtaaatattaatattcaactgttagttatgccatctttttatattgcatatacaataccacactgtgctatttcgtcacatttggttgattaattggaatgcacgtaacaaactttaactcaatagtttatggaaatttcacttttagtagtttttttttggtgcgtgaatgtatagggtttgttcaacagtattctgttcaattattatggtaatctatactctattactaccatcgtgcattttactttaaaaatatagattcaatgatttatagttattgatgaagatgacaattgcttctggctttctgcaacgttttcctttcttactactttcacactatagcaaattgctcttgcttgcgtaactctgcgttttgaaatgtgtagtggtgttagtttattgaattacctcattggtcacccacttgctcatgcttgacactttgaatggttatggttgttacttgtcagaagcctgacagtttttaacctgtttgtgtcatgcatcaacaatcttgagtgaaatctctgtacaatggaaaagctatcgaccgtcaatagatatgttaaataaaataaatttcatctatgttcttgtgtatgttaattcctccagcattatctctaccttgttgtgtttttcacgaattttcaaatttactttcgaaatgttccagatctgtgtgaccaataattgttacctgccaggtgctgagattactgtggaactgaaattgtaatttctgaaccacccaagccctgatttgtaacaatacttgaactgtctttggtcctaatatgctatcatgtaggataatttatcacctctaccagatatatgtaactactaggaaagactagcaagatcatcggtaaactttttgaaccagcttttctttttgtggaaatttgtagcatgataatagaatattctggtggttcctggttatcaaatactttgactgttcatgcatgtttgcctttctttttaaccaatgccaatattctggtcgttgaagcatgcatgttcctatagtttgtcgtttcaactttcatatggtttgggcctttggggaatgattttcttcctgtctttatgctcagttcctggttcctacagtcaattgctttagcccttgccttgtggtttggacctatttacgtccctcgttccaataaccaatcaataattgctggtcatgcccaattgcaaaattaatcaattttacatttcaatagttatattgtgtagttttgatgttttaaaaatcgctggtcctactgaaatttactcgtgtaattttattgttttaaacatttgttcatggacttgaatgttgcagaccggagacaaacgaagagaaggatttgaaagaacagattaacctgcttagggtggatttgaaagaaactgaagcaaacataagtgacgaggataaaaaaggtttatcagaaaagttatcccagatggaaagggaactggagcgtcttacagttgagttggacaacaaggttcgatttgggcaaagacctggttctggatctggcaaggttactgcacatttaagtaattcaccagacgaatcacagattacagagtcaatggaacaaccacgttcccgtagcagcatagaccaaaatcctaaaccagcagaagaaaggtgggggtttcagggcaacagggacagaggctcatttggtggtaacagaaatacagacaggtttgtttgttcctactgtccatgatgcttattagcataaatccaactgaacgcgattaacattgatcacagtaactttgtcctgtattactagacatatctgtcaagtttagatcatttattaattttcagcagatggtagatgtgaactctttgtctacctgcttttcaggtcgttaacagggcagagatggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0595800, RefSeq:Os02g0595800