Os09g0101100

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Revision as of 07:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0101100| Description = DNA glycosylase family protein| Version = NM_001069084.1 GI:115477907 GeneID:4346365| Length = 4312 bp| Definition ...")
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Gene Name

Os09g0101100

Description

DNA glycosylase family protein

Version

NM_001069084.1 GI:115477907 GeneID:4346365

Length

4312 bp

Definition

Oryza sativa Japonica Group Os09g0101100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:191205..195516

Sequence Coding Region

193608..193776,193876..194072,194534..195493

Expression

GEO Profiles:Os09g0101100

Genome Context

<gbrowseImage1> name=NC_008402:191205..195516 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:191205..195516 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcagaggaggcgattctgcagaagcggaagaagcaggcggaggagatgttggccccgttaccttttccccacctgacggcggctgaagagaccccgcccaaccccgaaaccccaatctcgggagaggcggtggcggtggcggtgaggagaaaggagcggaagaggaagaatgaggaggccgcgggcgtggggaaggagaaaaagcgaaagagtagggaggggccaccggccccggaggcgaggaggaaggagcggaagcggatgctgatgcccagacaaccatctcatgaccaaatccacggcatccaggtacaagcaaaccctcctccactggccggaggacgagatgaagcgtatggcaggagtagctgcaagaagatccgcgtcctgagcaaccgcgagatcatcaagatgaggatacaattgaggaagcaccagccactacctcaaggcatttttgacccagagattattatggcttccaattccacccagcaggaccccaatcattcttcgccattcggcgccttctttgaccagttctgctacaaacccacccgccaagatcgcactcccccacttcctagaacgcctgaccttctagtcaggccgccgcctcgggatcatctatcatctgcttcatctcagctcatgacaaatcacacctgcaagatcaacagcacctgtaagacaacaaccttcaagacaagatcaggaccaaaccaaggaaatacgaaggtaaaagaaatggcaagggtgaacaaggaacgaaaaccagcaccgctgcttagccgtgctgaaaagaggtcagacaaataccgccgccttccgttggaccagctggtgcctccgccacgctcccctcataagctactgcaggaaaaatacgcttctgacccgtggaaggtcattgtcatctgcatgctcctcaacttaacacaggggaaacaagtgaggaggaaagttaaggggttcttcaaacgatatcctgatgctcaaactgcatttagtgctgatcctgaaaagatggccaagtatctggctcctctgggtttgcagcgtgtaaaagtaaacagaatccagagattctctaaggcgtatgttgaagaagaatggacctacattactgagctttgtggtgttggcaagtacgcagctgatgcttatgcaatcttctgtgcgggcagggcaacagaggtggtacctgcagaccataagttagttgattactggaaatatgtttgtttcgagttgcccatgattcaggtaggaatctcgacacaagtttcagtgaattgcacatcacttgtgagctag</cdnaseq>

Protein Sequence

<aaseq>MAAAEEAILQKRKKQAEEMLAPLPFPHLTAAEETPPNPETPISG EAVAVAVRRKERKRKNEEAAGVGKEKKRKSREGPPAPEARRKERKRMLMPRQPSHDQI HGIQVQANPPPLAGGRDEAYGRSSCKKIRVLSNREIIKMRIQLRKHQPLPQGIFDPEI IMASNSTQQDPNHSSPFGAFFDQFCYKPTRQDRTPPLPRTPDLLVRPPPRDHLSSASS QLMTNHTCKINSTCKTTTFKTRSGPNQGNTKVKEMARVNKERKPAPLLSRAEKRSDKY RRLPLDQLVPPPRSPHKLLQEKYASDPWKVIVICMLLNLTQGKQVRRKVKGFFKRYPD AQTAFSADPEKMAKYLAPLGLQRVKVNRIQRFSKAYVEEEWTYITELCGVGKYAADAY AIFCAGRATEVVPADHKLVDYWKYVCFELPMIQVGISTQVSVNCTSLVS</aaseq>

Gene Sequence

<dnaseqindica>1741..1909#1445..1641#24..983#gttccacatcggcgcagttgcccatggcggcggcagaggaggcgattctgcagaagcggaagaagcaggcggaggagatgttggccccgttaccttttccccacctgacggcggctgaagagaccccgcccaaccccgaaaccccaatctcgggagaggcggtggcggtggcggtgaggagaaaggagcggaagaggaagaatgaggaggccgcgggcgtggggaaggagaaaaagcgaaagagtagggaggggccaccggccccggaggcgaggaggaaggagcggaagcggatgctgatgcccagacaaccatctcatgaccaaatccacggcatccaggtacaagcaaaccctcctccactggccggaggacgagatgaagcgtatggcaggagtagctgcaagaagatccgcgtcctgagcaaccgcgagatcatcaagatgaggatacaattgaggaagcaccagccactacctcaaggcatttttgacccagagattattatggcttccaattccacccagcaggaccccaatcattcttcgccattcggcgccttctttgaccagttctgctacaaacccacccgccaagatcgcactcccccacttcctagaacgcctgaccttctagtcaggccgccgcctcgggatcatctatcatctgcttcatctcagctcatgacaaatcacacctgcaagatcaacagcacctgtaagacaacaaccttcaagacaagatcaggaccaaaccaaggaaatacgaaggtaaaagaaatggcaagggtgaacaaggaacgaaaaccagcaccgctgcttagccgtgctgaaaagaggtcagacaaataccgccgccttccgttggaccagctggtgcctccgccacgctcccctcataagctactgcaggaaaaatacgcttctgacccgtggaaggtcattgtcatctgcatgctcctcaacttaacacaggggaaacaagtgagctgcctgcctgattgtctttttctttttatcgtctgcaccaaacctacaatcgtagaaactaacttgtttgattggcaggagttcctagaagcaccaaaagcaaattaagcttacatgtgttgctgttagccactaacaaataatcttacttgtttttttgtaaacatgtctttcatcaacaaaagagtggttgactgtattcatttgtcgcaatttgtaattccaaatcataaccaacatcgagtactgaaatgcattctgtaatttatacaaggagcatcttccattttgttgtgttggtcatgccgctgcacaatacagcttacaaatttcatatcttgttttagtgtagcactgagtctaggttagcatttgcaatagtttaaaaggtgagtgatctgatatttcaaatggtaaatttgaaggacttcaacaccctctgtcaaccattgtaggtgaggaggaaagttaaggggttcttcaaacgatatcctgatgctcaaactgcatttagtgctgatcctgaaaagatggccaagtatctggctcctctgggtttgcagcgtgtaaaagtaaacagaatccagagattctctaaggcgtatgttgaagaagaatggacctacattactgagctttgtggtgttggcaagtaagtcccctaactcatctgctgtatattagtatttgtagaatgttgtttcttatctttccacattattagtaataaataagttgatttgtgctgcaggtacgcagctgatgcttatgcaatcttctgtgcgggcagggcaacagaggtggtacctgcagaccataagttagttgattactggaaatatgtttgtttcgagttgcccatgattcaggtaggaatctcgacacaagtttcagtgaattgcacatcacttgtgagctagtttagcttgtatgtgaacgttccctgctctcattaggataaaacttgatataccttaaggcaaagcagctgttggcaatgttcatactttgattgtagcattaaataacaacatggtaaacatatgcgtacatcttaagagttttcagcgaagactcattttcagatatattgttgtttattgcttgcatgtctataataaattgtgcttactctatattagagtttcactttcactagtgtatatagctgtgcattcacatgactctaataatttttttatgtgctatgcatatgaaaatatatgaaatataataggcgaacaaagttttttttgttaatatagctgtgtaatctctctctatatttatattatgtagcttagagatttttaatgttttagagaataaaattagctggaagtctacttaatacgaatttcggatttattttttatgtgcaataaataatttattgtaaactttacattcagatgttaactaaatttacataatttgggccatcttctatgttgtctgagtcccagcttttccacagtctctgttgctgcatgtccctcttatcttacctttatttttcattgctgcgtttactttggaaggatacgtttctgagtttttaattttgaataaaaccaatacctctgtgtattattatgaaattgtcctaaaatttagcttttttccattcacatttttttatgagtgttataacctatataatttgctgtacccaacgttaatttaatcatagggacttgataaaaaagtaactactttgatggactgtttttcacattataccattattaggtgttgggttttgcattttttttctgtatttagtctcaagcttttatgcaaattgtttttgaagaccatgtgtgactgctggtgtcatgttctgtgtgggttgcttggaaagccttctatagttctatttctagttttgttcctgtgcaacattttttcttttcattttctttgctctctcacccacaccacatgtccacatgtgaggggaggtgctggaaagctctagaagatatagttttactgtgtttcactaattcaatcctacggctttctgccttttttttccttaatcgaatggtccagcctttttttgcttacgtggatcaattaggtgatgtttcaagattcaccattcacttatagagatgacccatgacattcacatattatggtaatgagagtttcaaactgggtggaccacagtgaggacatctaggcatagcttgtgcctgatggcaatctgagcaagaatagagatcccatccaagcatgcacaacagcctacattacattgtagatgaaatccatcgttgccatgaagcttcgttaggagtacatgcatgcaggtgatgcagcgacagctagcaggacaccagcgaagttaatcgcgggatggaaattgccagctgctcaatcggcgtatgaggtgggagaactcgggacgggacagtagtcgaggccgccgacagaaggcgtgtgatgaagagaatgagtgttctccttgttaaaccgtgaattggaagtgatcttgttgaacctaatagctactagtaggaagcaatctcggaataaaaatggaaatgccttgcggctgagctccaggtaaggaagatggtaaggaagatgtgaacgatcagggaaggaagacatgcgagtgatcggtgcgggagttcgaacgccttgcggcggttccctgtagcagaaggggactgatcatggttgatatagtgatagagtttggggattggattcagactccggaacctgaagaacagttggaggaagggcaacgccaaggaaatcaaactcgaacgtgaagtaacagatgaaagaactgtgcgaagggcgacagaaacacctctctttttaagtagtagagaatatgccaacaagttctgttttctttgctagttgaattgagacaaatgttacgtacttttgtcatgtgattttcgactttcgaaagatttggtagcggtatgctaaccattatctttttattgtattgcagcaatctcaggacatgcaggaagctggagtgactgagatggagcatgctgtccccaaggtggaggaattggccgtgtgctgctaaattaatgtaaagatggctgaattagtatataggctggtgcaaatgcttttgttctcctttggtcctcaatgttctgtgctcctggttcatgcttgtctattttgaaacatctgagagcttgctaattctattttgtgattactgattactactaagtaggttgtaacaaagttaccaaggcgtagtggcacttagttttgcccgatagaaaatggggcgccggaatgaagttgaggatcatctttattcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0101100, RefSeq:Os09g0101100