Os02g0596100

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Revision as of 02:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0596100| Description = GLE1-like family protein| Version = NM_001053854.1 GI:115447078 GeneID:4329863| Length = 8173 bp| Definition = Oryz...")
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Gene Name

Os02g0596100

Description

GLE1-like family protein

Version

NM_001053854.1 GI:115447078 GeneID:4329863

Length

8173 bp

Definition

Oryza sativa Japonica Group Os02g0596100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23989978..23998150

Sequence Coding Region

23990357..23990578,23990671..23990793,23991331..23991459,23991659..23991742,23992477..23992572
,23993203..23993284,23993515..23993585,23993737..23993831,23994558..23994744
,23995054..23995225,23996268..23996416,23997046..23997169,23997304..23997459
,23997569..23997715,23997809..23997810

Expression

GEO Profiles:Os02g0596100

Genome Context

<gbrowseImage1> name=NC_008395:23989978..23998150 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23989978..23998150 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcttcgcgcgcgtggagctgcggtgccctagggccctcgacccccgcccgagctggaccctcggcgacgtcctcaccgagctcgacgcgctcgaggccactcgccgcaccgcgcagcccacgcccctcaagcagccgccggagtgggctagcagtggcagcgtgagggagaaggcctttgtgatgcgggttgaagaggaagatgacacggatgaggacgattacgacagtgatggggagtcccgggctcttgtggccaaggccactggagcaaggttctcatgcaatgatcttgaatccagtgatgctgaagaatcagaggatgaaatggatggcaggattgcaccatatcacctgatggagaaacggagcctagagaagagcattctgcttgagctggaacgtgagcatcatctgaaagttcaagaggaagtcagaagtaaactatctgcattggaggtatgccaccaaagtgaaatccagcgaacagtttctgcatttgctcgactacagaaatacgcagaatcaagaaaagagatagacagaaggctagatgtccacttccagagaaaaattgcagaagtacttgataaacatttgtctatggtccaaagggatcatgaacagaaatcgcaaattgtggaacgtagaataagagatgatgctgctcttgaagaagctaaaagaaaggagcaagccatgaaggacgaaaaaataaggcaggaaagagccaaacaagaagcagaggccagacagaaggcagctgcaaagttagcagtggaagcacagaaagcagcagctgaggctgctgcaaaggaagcagcagaagctcagaaagcagcagctgaggtttccaaatccagccaaaattctcagaacaacgttgcaggaacaatgagggcaaacaagagtgaaattaaatctgaattaccagggatcaaagtctttgctgatcattctgcactggaagcagaattgcggaggcgtgcattacttgatcaagtgccagcgaacattcattccagcaaggagttcagcagatatgaccgacaaattgcaaaatctattggtaaacttatgccgactactgacagtgtaaaagcaagggctggtgagcttattaaagctttggatggacaggattgcccacgtccaattgcttgccgtatatttgcaaacaagattatttcaatcgtcaagagtagaaatacaaaggacaaaacatttggaaatttggcctttgcttgtggatatgtcatgcttctagtcaccagccaggtaccagatgcaatggattatcttctagctgagttccacagagtttgcatgtacacagttccaaagcatctgcatgctttaaacgcacaagtacggaatagagattattacagactgattggctaccaggaagaaaatggacaactcgagagcactgaaagttatttgacatatgttgccgcatacgtcaagctgtatgctgcaatgattcagaccgaaattaggggcgtgcggcatccacatggcttagctgaggggtggaaatggcttgccatgttccttaatactctcccggccaccacagcaactgcttgtgcccttcatgctttcctcaaggttgctggttttgcacttcacaagaaatacggatcacagttcatgaaacttctagatgtaatattgcggtgcttcttacccgctttgaaggaacaaggctcacgaattcaggctgaggctgcaagtaatctacagaattatctgactgacaaggtttaccttgaggaaccagaaggccagtaccttgcgcaacagcttctatctaaagagttgttcacgtga</cdnaseq>

Protein Sequence

<aaseq>MGFARVELRCPRALDPRPSWTLGDVLTELDALEATRRTAQPTPL KQPPEWASSGSVREKAFVMRVEEEDDTDEDDYDSDGESRALVAKATGARFSCNDLESS DAEESEDEMDGRIAPYHLMEKRSLEKSILLELEREHHLKVQEEVRSKLSALEVCHQSE IQRTVSAFARLQKYAESRKEIDRRLDVHFQRKIAEVLDKHLSMVQRDHEQKSQIVERR IRDDAALEEAKRKEQAMKDEKIRQERAKQEAEARQKAAAKLAVEAQKAAAEAAAKEAA EAQKAAAEVSKSSQNSQNNVAGTMRANKSEIKSELPGIKVFADHSALEAELRRRALLD QVPANIHSSKEFSRYDRQIAKSIGKLMPTTDSVKARAGELIKALDGQDCPRPIACRIF ANKIISIVKSRNTKDKTFGNLAFACGYVMLLVTSQVPDAMDYLLAEFHRVCMYTVPKH LHALNAQVRNRDYYRLIGYQEENGQLESTESYLTYVAAYVKLYAAMIQTEIRGVRHPH GLAEGWKWLAMFLNTLPATTATACALHAFLKVAGFALHKKYGSQFMKLLDVILRCFLP ALKEQGSRIQAEAASNLQNYLTDKVYLEEPEGQYLAQQLLSKELFT</aaseq>

Gene Sequence

<dnaseqindica>7573..7794#7358..7480#6692..6820#6409..6492#5579..5674#4867..4948#4566..4636#4320..4414#3407..3593#2926..3097#1735..1883#982..1105#692..847#436..582#341..342#tcggcccaaggcccatctctcctctacgtccggcggcggcgcatcccggcctcgcgctccggcggcggcggccagtctgaggcggagcggcaccgcggcacgggagggcagggcgcagcggcgacggcgaggaagccaaccgggcgcggcagcaagggagaccgcgtcttgtctgcacggctccattagcggctggaggtgggactggagccgggagacccaactagcgtccaccgcctctccgccaccgccgccgccgcctcccgcaacttagggggttttgctgcgccggcgcggctccaatccgctccggggcggacctcgccggtcgacggccgccatgtgagccccccatcgccgtttccgctcgtcaccgcttggtgttcgttaatggcaggcaggctgatctctacgtcttcctcctcctcctcgcaggggcttcgcgcgcgtggagctgcggtgccctagggccctcgacccccgcccgagctggaccctcggcgacgtcctcaccgagctcgacgcgctcgaggccactcgccgcaccgcgcagcccacgcccctcaagcagccgccggagtggtatctctattctccaatcccttgcgctcccttgcttatggtttcgccgataagctgcaatcgtttccctctacattgcttctatatgatttttttttggttcatttagggctagcagtggcagcgtgagggagaaggcctttgtgatgcgggttgaagaggaagatgacacggatgaggacgattacgacagtgatggggagtcccgggctcttgtggccaaggccactggagcaaggttctcatgcaatgatcttgaatccaggtgaagatttgatgctgaaatttggccactgcaattgcaatttatttgctttgaagtacggtacattatctgcaattaagtttaaatgaatggcgtattgtgtgagatatccccttcttttgttttcttcctagtgatgctgaagaatcagaggatgaaatggatggcaggattgcaccatatcacctgatggagaaacggagcctagagaagagcattctgcttgagctggaacgtgagcatcatctgaaagttcaagtgtgtattcatcaatctatactgttatatctttcttactgaatgcagtacttatgggctgatttttctttgatgtgttggcaatagaccattgaattattttcattaccattaatcctcattctagtttagggttaccatggcattaggttacactttacggatcaactttatatctttttcctcacctttatgtaggtattttaagctatccaggcatgtggatgcttccattatctttcatctttctaaggttatactgtatatgaattcctgaatgaagcttttgtttgttccctttaaggttagtgtagtgccacactgatatggttggataatgacatgatgaaatttcaagaaaaacaatacatcacttctgttagttgctacttgaagaagatttttcaaatacaatactgcatttacttcaaattggatattgtgatccaagaagtttaacatagaaagccaacagggatgtcatatgactaaatttctaagtattgggtatcatagtactaattatctttttggctgatgttgcatgcctttattttttaccatgatggatttattaaatctgctgaatcctttttgttcattttcttcatatgattttttttcttcaggaggaagtcagaagtaaactatctgcattggaggtatgccaccaaagtgaaatccagcgaacagtttctgcatttgctcgactacagaaatacgcagaatcaagaaaagagatagacagaaggctagatgtccacttccagagaaaaatgtatgtttttgttgttgaattgtttctcctgtgtctttttaaatctacatttcatgattactgttgatttttcaaattttgaggaaactgtatgttttacaaggtctttggtgatgcaattttctgggactagggttaacttctgtactagtttgttctcttttgttactggaggattttctgtggcacatatcaagatattcttgtactagtttgtcaagactgaatttttattggtggttgctttgtaaagttatgccatttttatttgtcataactcaatttattttattgtaaagagggcttacaaagtgctaagtttttcattccaatatagtttattactcctgagtggaaaaggtatatattcatgaaggctgacggaccttgctagtagctacacagtttatcatggattatttctagtgcacatagttttgaagagaaaacaatcatctcctatatgcacaaattccaatataaaggtttattgggtgattgtggactaatactaagatccttaatgtttcctccaccatttgctattatcctcatcgttatttggttaaatttgctacttaaatgatcaatgagaaattccaagcccaaggtttcagctctttacattttgcagcaatttatatattctattcacaactgattaaatcgtgtgggtttaacgtacaaatattccatacttatacctgtggtgtttggtcaaatgattagcgactgagactaagggttgactattttttaaatgctctatttgtgttatataaggaattaactatctgtgacacaattatatagtttttgtacttctttgtgtagtaactttatgttccagttcaatcattagcactgtaaatattttttcagaaactttgcatgttagcgtttgtatttgttttcctttgtagtagttctcacaggataaaggacatatactctgatgatctttcgttataagttatacttggattttctgatgatcttttgttggattctgtaccttgttataattgttgcctttttgcagtgcagaagtacttgataaacatttgtctatggtccaaagggatcatgaacagaaatcgcaaattgtggaacgtagaataagagatgatgctgctcttgaagaagctaaaagaaaggagcaagccatgaaggacgaaaaaataaggcaggaaagagccaaacaagaagcagaggtttgtttgcctagatgtgctggtcacttggtgtgtttttgttaacataaactgatatatttcttttgatatatgtcaatatgtgagacttaattcattgttatttcttttggctctggtatttatcataatacttagtccattgagttccatctagttcagttatatctaataccttgttattcatgttacttcttcactgaacttctttacaacctacgtagttcagaaacctaattttctttacttcactggtagtcgcttaaatgcataaccagtttaccagaaatttcatgaactatgatgcaggccagacagaaggcagctgcaaagttagcagtggaagcacagaaagcagcagctgaggctgctgcaaaggaagcagcagaagctcagaaagcagcagctgaggtttccaaatccagccaaaattctcagaacaacgttgcaggaacaatgagggcaaacaagagtgaaattaaatctgaattaccaggtatttcttgcttttacagaaccattataagtttatatcgcaatgttttatggagctattctgaagatctgctgattgatatgcttagtagaatcaggttgtgtctatatacatatttcttaaaaactagttttcatactaagtcaggcagccattatcacagcttaatgcttatgaacatcaaatggtggatattaatctaaaacgtaaatttaaggattaaccttctcatttttcttgtatatttacttatttagactgtgggcttaggctcatgaagggccatatatatcatgtaaaagtattataacatgtcagaaggataatcacccctaactgatcttcaactatgcaaaacccatgttcagcccctagaactttaccatgtttccttaattagcacaaaggttgtggtactgagacaacctactcctaacagcaatatttgaaatataattaaaatccattgtagtgggatccaggaaccatgcaaaacttgaagggatacacagtttcaacgcttaaaagcatacagacataaataacacgagggaaaactgtggttctgctttcacattcatgcgctgcatcagacattccatttttgtatcaagaataatttctagccttggtgttaatttcctaactacactggtcactggctgactatcgtagcttgattttataaggactgtgatattaatgttgattgctcattcataacagggatcaaagtctttgctgatcattctgcactggaagcagaattgcggaggcgtgcattacttgatcaagtgccagcgaacattcattccagcaaggtcttccaactgcatttgtacaatttgctgcaaatttgttgttttaacattgatgatgaatgatggtcaccctgctggtttcagttcttttgccatatggatgagaattgtggtaagcttgtatttgactattattgtttttattgtgcaggagttcagcagatatgaccgacaaattgcaaaatctattggtaaacttatgccgactactgacagtgtaaagtgagtatatatataaaacatatttttaactgcctagatccgtatagctcaatgcacataagcacattcaaataaaaaagatctacatctattctcctttttccatcatttgacgcgtgataagaactaattgccttttggtcatatagttgtttttgaagggttttaaagtgagtatttgatttgaatatttatttaatttgaaatctacccctaaacatttgttgcagagcaagggctggtgagcttattaaagctttggatggacaggattgcccacgtccaattgcttgccgtatatttgcaaacaaggtacttttatgtggtaatggcctcttttttcaaacgagtagcatcataaatatgtgtgaaatgtcaaaaagtctgagttgaacgacatgaccatgcaatatttttatccatatgttcaatataagtacgaacatacttgctaatataaacttaggcccaaacacttgctttatgaactgacttgtcggtcaatagttgaaagtcgaaacatgaaccatcaaatacctgttttatagtttagataattggtatgttaactgcctacatgatgaccttacaatttttagacacatttttttaatagaaaaaatgtgtctagaatatgtaaagtaatagcatcatgtcaccatttaacataccaatcatctaaacttcagttacatttttttagaaacatggatttaccacttcactttttggctttgcatagtctctctattgtagtgtatacctctgcagtactggtctgttgttgccaacatgaacttaagtgtgctcacataactctaactagaaatttttggccttctcatgtactagaattagagtcctaccgggctgtccattttgacatactgaattctacttgatattgttgacttacatagctgacctgatattgatttgcagattatttcaatcgtcaagagtagaaatacaaaggacaaaacatttggaaatttggcctttgcttgtggatatgtcatgcttctagtcaccagccaggtatgtttgtgttttttagttttactaggcattacttttgttaataagtgcatatcgaattgtgctcactttctggacatttaccgcactcagttttctttcttatagctctcttctgatatttcagaaggcatatgttgtgatcatgaattcttgattggtggaagtatattgatacttaaaattagtttatagtaggaaaagactatttcttccttacatgacagctcatccttaataagtggaatggaaacccacagtaactaattttcgttatgtttcatgttaagtttaaaagttgaagctgcttttgacacctcatttaaacatgaagtggcatgcaatgatgaactattgcactgttcgtcatggttagaggaagtggatattaagtgtccttaaatttgatggcaataaacagtggaaggttaataattatggagcatggaaactcacatgctgtttgccagtagctgggatagatactccagttgattccgatgaacatagggctactgtgtatcttttgtcatacactgatcaacttttttgcagcctagtttgcaaccacataatgcacaatcttgtgattttcttatcatggttggaactcaaaacaaaattcgttgctgcatgaccactaagacgatagctagttccaatatttctgtacactcctatcctggctttgctctttcaatgaagtttaataatttactaacacaaatgctcaggtaccagatgcaatggattatcttctagctgagttccacagagtttgcatgtacacagttccaaagcatctgcatgctttaaacgtaagtcttcatgccactaaactcctcaatatctttgcagcttgtttatattcttgcttatatatgagcagcaatggaaaaaacaagtgaggtgttctatttaggtgttttgaacaattataatgatgttttattcacataattatttttgtgtttagctcatgtattttttttcctgattttacttgtaattgtttaggcacaagtacggaatagagattattacagactgattggctaccaggaagaaaatggacaactcgagagcactgaaagttatttgacatatgttgccgcatacgtcaagctgtatgctgcaatgattcaggtgtgtatggcctgttttctaatattactagtgtggtaaaaatagctgttagggttattaattgttagaaatgggtatgcatttaatggttttgagtgttttgttggttccctctctactaatatggtgctttcttgtcttgttggttgttgcaaaaagggcttattatttctctttaattgcaatttgtcagtttttctttcctgggatattatttagacatgggccaccacagaggtgacgagctcacagaaaaaccattacaaccaacgtgaaagacagtttgccaaaatggctccaactagcacagtgcattgtgcatacgactctcagtgatcagataactcttttcagtgcactgactctgagtgtaacatgtgttgctttgcacattaattgaattcactatcacagttccataagttcatccagtgttaataccgtttcatatgatcgttttatttgagcagcagacttctgttcaacaaattgatgttttatttagaattgaaatacaaccgcaatttttttctacagaccgaaattaggggcgtgcggcatccacatggcttagctgaggggtggaaatggcttgccatgttccttaatactctcccggccaccacagcaactgcttgtgcccttcatgctttcctcaaggtaaaaatatgcttcaagacccccatcccctcctatgcgtgtgtgcttgtagcaggtttgttgtagccaacttggattctgtttctgttcaggttgctggttttgcacttcacaagaaatacggatcacagttcatgaaacttctagatgtaatattgcggtgcttcttacccgctttgaaggaacaaggctcacgaattcaggctgaggctgcaagtaatctacagaattatctgactgacaaggtttaccttgaggaaccagaaggccagtaccttgcgcaacagcttctatctaaagagttgttcacgtgaggatcagacaccagatcagcatggcgatgtggcactgcacactggccaagtttgtcaccgcggttagcaatggctgttgccagataatgctctatgtgtgcagcaagacatttcatactgtccaaatggagcaacctgcacggttatatgatggcagagaaggccagaatcgccctgaagaaatgtcttggattgcgcccccaaggtctccctttttaagccaccaattttaatgtataaatgccatgtacgaatactatagattagatgcgatgcaatttgttgtacgcctgtattgagggcgagcctgtaatttattcgaagtaaatgttactctggacatgtgctgtcttatataatctgttgtacgcttgttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0596100, RefSeq:Os02g0596100