Os02g0596200

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Revision as of 02:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0596200| Description = Glycoside hydrolase, family 5 protein| Version = NM_001053855.1 GI:115447080 GeneID:4329864| Length = 2183 bp| Defi...")
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Gene Name

Os02g0596200

Description

Glycoside hydrolase, family 5 protein

Version

NM_001053855.1 GI:115447080 GeneID:4329864

Length

2183 bp

Definition

Oryza sativa Japonica Group Os02g0596200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23999972..24002154

Sequence Coding Region

24000040..24001102,24001600..24001886

Expression

GEO Profiles:Os02g0596200

Genome Context

<gbrowseImage1> name=NC_008395:23999972..24002154 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23999972..24002154 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgccgccgcgtcgctctgtgcctcgtgcttttcgccttcgccggcctgcacgcggcggcggtggaggccgtgacgctgtcgacgtcgtcgcggtggatcgtggacgacgaggccggcgggcggcgggtgaagctggcgtgcgtcaactggccgtcgcacctggagccggtggtgacggaggggctcgggatgcagcccgtggacgccatctccaagaaggtggcgtcgctcgggttcaactgcgtcaggctgacgtaccccatcgcgctggccaccaacgcgtcgctgtcgtcgctcaccgtgcggcgctcgctcctcgcccacggcctcgccggcgcggtcgccggcgtcgaggccaacaaccccgggctcctcgacctcacgctgatcgagtcgttcagggccgtggtcgacagcctcggggagagcggcgtcatggtgatcctggacaaccacgtgagccggcccggctggtgctgcgccgacgacgacggcaatggcttcttcggcgaccggcacttcgaccccgacgcctgggtgcgcgggctcggcgccatggccgcgctgttcgccggcgtccccaacgtcgtcggcatgagcctccgcaacgagctgcgtgggccgaggcagaacgccgacgactggtacaggtacatgcagatgggggcggaggcggtgcacgcggcgaacccggcggcgctggtgatcatgggcgggctcgggtacgacaccgacctgtcgttcctcgccgcgaggcccgtggacgtgagcttcgcggcggcggagcgggggaagctggtgttcgagctgcactggtacagcttcgccgacgcgcgcgcctgggagtccgaggacgccaacgaggtgtgcggccgcgtggcgcggggcgtcgcgcggcggggcgggttcctgctcgacgccgggttcccgctcttcctcagcgagttcggcgccgacacacgcggcggctcgcgcaaggacgaccggtacctcccctgcgccgccgccgtcgccgccgagctcgacctcgactgggcgctctgggcgctgcaggggagctacgccctgtcgacgtggcgcctcgtgtcgggctcgacgatgcacgtggccgtcaacgcgacgacgacgacgacgccatctcgggacggcggcggcgggctgctgtgcctggacgtcggcgacgacggccggagcgtggtgacgaacccgtgcaggtgcctcgacgacgccgccgccggcgagtgcgacccagagacccagtggttcaagctcgtcaccagcacgaggtccccggccaccggcgccgccgcggcggccaccgtggcgcgagggctaattgctgcgtga</cdnaseq>

Protein Sequence

<aaseq>MRRRVALCLVLFAFAGLHAAAVEAVTLSTSSRWIVDDEAGGRRV KLACVNWPSHLEPVVTEGLGMQPVDAISKKVASLGFNCVRLTYPIALATNASLSSLTV RRSLLAHGLAGAVAGVEANNPGLLDLTLIESFRAVVDSLGESGVMVILDNHVSRPGWC CADDDGNGFFGDRHFDPDAWVRGLGAMAALFAGVPNVVGMSLRNELRGPRQNADDWYR YMQMGAEAVHAANPAALVIMGGLGYDTDLSFLAARPVDVSFAAAERGKLVFELHWYSF ADARAWESEDANEVCGRVARGVARRGGFLLDAGFPLFLSEFGADTRGGSRKDDRYLPC AAAVAAELDLDWALWALQGSYALSTWRLVSGSTMHVAVNATTTTTPSRDGGGGLLCLD VGDDGRSVVTNPCRCLDDAAAGECDPETQWFKLVTSTRSPATGAAAAATVARGLIAA</aaseq>

Gene Sequence

<dnaseqindica>69..1131#1629..1915#acgcacgcacgtacggcgcgcgctcgcctcactgcatttctatcccggccatcggtccggccgtcacgatgcgccgccgcgtcgctctgtgcctcgtgcttttcgccttcgccggcctgcacgcggcggcggtggaggccgtgacgctgtcgacgtcgtcgcggtggatcgtggacgacgaggccggcgggcggcgggtgaagctggcgtgcgtcaactggccgtcgcacctggagccggtggtgacggaggggctcgggatgcagcccgtggacgccatctccaagaaggtggcgtcgctcgggttcaactgcgtcaggctgacgtaccccatcgcgctggccaccaacgcgtcgctgtcgtcgctcaccgtgcggcgctcgctcctcgcccacggcctcgccggcgcggtcgccggcgtcgaggccaacaaccccgggctcctcgacctcacgctgatcgagtcgttcagggccgtggtcgacagcctcggggagagcggcgtcatggtgatcctggacaaccacgtgagccggcccggctggtgctgcgccgacgacgacggcaatggcttcttcggcgaccggcacttcgaccccgacgcctgggtgcgcgggctcggcgccatggccgcgctgttcgccggcgtccccaacgtcgtcggcatgagcctccgcaacgagctgcgtgggccgaggcagaacgccgacgactggtacaggtacatgcagatgggggcggaggcggtgcacgcggcgaacccggcggcgctggtgatcatgggcgggctcgggtacgacaccgacctgtcgttcctcgccgcgaggcccgtggacgtgagcttcgcggcggcggagcgggggaagctggtgttcgagctgcactggtacagcttcgccgacgcgcgcgcctgggagtccgaggacgccaacgaggtgtgcggccgcgtggcgcggggcgtcgcgcggcggggcgggttcctgctcgacgccgggttcccgctcttcctcagcgagttcggcgccgacacacgcggcggctcgcgcaaggacgaccggtacctcccctgcgccgccgccgtcgccgccgagctcgacctcgactgggcgctctgggcgctgcaggggagctacgcgctgcggcagggcgtcgccggggccgacgaggtgtacggcgtcctcgactggtcgtggagcaagccccgcaacgcgaccgcgctctcgaggatccagtcgctgcagcgcccgctccgaggtcagttcgctgtcaacggcgtcgctcgctcgcgccatcatcgccggtgcaacgtttctaattgaccgaagggttcgccggcgatgcgatgcgtgcagggcctggctacgacgaggcgaggccgtacaccgtgctgttccacccgctgacggggcgctgcgtggtgaggcgcgcggcggatgacgcggcggcggcggcggcgacgctggagctgggccggtgcgaggacacggacgcgtgggcctacacgcagccggcgtcgacgctggcgatgcggggcgcggggcggggctcgccgccgctctgcctgagagccgaggggagcggccggccggcgcggctcgccaccagcgacgccggcggctgccgcggcgacgccctgtcgacgtggcgcctcgtgtcgggctcgacgatgcacgtggccgtcaacgcgacgacgacgacgacgccatctcgggacggcggcggcgggctgctgtgcctggacgtcggcgacgacggccggagcgtggtgacgaacccgtgcaggtgcctcgacgacgccgccgccggcgagtgcgacccagagacccagtggttcaagctcgtcaccagcacgaggtccccggccaccggcgccgccgcggcggccaccgtggcgcgagggctaattgctgcgtgaaaatcgaccgatcaatcgatcgtgtccgtgcattcgtcatcagagaatcgaaatcttatttaaaatccgcgaacacaacactatactagctgctagctgacttgcattgatcttggatggaagttagagagttcgtgtcacgcacgtggcgcgcgccaagctgcagttcatgtgtggtcgatgtatccatgtactgttactgaacagtgcgcttgagctgaaccattgaacggatcaagaactaattaaatactccctccatactggt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0596200, RefSeq:Os02g0596200